Literature DB >> 33410371

Novel dual multiplex real-time RT-PCR assays for the rapid detection of SARS-CoV-2, influenza A/B, and respiratory syncytial virus using the BD MAX open system.

Hsing-Yi Chung1, Ming-Jr Jian1, Chih-Kai Chang1, Jung-Chung Lin2, Kuo-Ming Yeh2, Chien-Wen Chen3, Sheng-Kang Chiu2, Yi-Hui Wang1, Shu-Jung Liao1, Shih-Yi Li1, Shan-Shan Hsieh1, Shih-Hung Tsai4, Cherng-Lih Perng1, Ji-Rong Yang5, Ming-Tsan Liu5, Feng-Yee Chang2, Hung-Sheng Shang1.   

Abstract

SARS-CoV-2 has spread rapidly, causing deaths worldwide. In this study, we evaluated the performance of the BD MAX Open System module for identifying viral pathogens, including SARS-CoV-2, in nasopharyngeal specimens from individuals with symptoms of upper respiratory tract infection. We developed and validated a rapid total nucleic acid extraction method based on real-time reverse transcription-polymerase chain reaction (RT-PCR) for the reliable, high-throughput simultaneous detection of common cold viral pathogens using the BD MAX Platform. The system was evaluated using 205 nasopharyngeal swab clinical samples. For assessment of the limit of detection (LoD), we used SARS-CoV-2, influenza A/B, and respiratory syncytial virus (RSV) RNA standards. The BD MAX dual multiplex real-time RT-PCR panel demonstrated a sensitivity comparable to that of the World Health Organization-recommended SARS-CoV-2 assay with an LoD of 50 copies/PCR. The LoD of influenza A/B and RSV was 100-200 copies/PCR. The overall percent agreement between the BD MAX panel and laboratory-developed RT-PCR test on 55 SARS-CoV-2-positive clinical samples was 100%. Among the 55 positive cases of COVID-19 analysed, no coinfection was detected. The BD MAX rapid multiplex PCR provides a highly sensitive, robust, and accurate assay for the rapid detection of SARS-CoV-2, influenza A/B, and RSV.

Entities:  

Keywords:  BD MAX platform; COVID-19; SARS-CoV-2; Taiwan; influenza; real-time PCR; respiratory syncytial virus; simultaneous detection

Mesh:

Year:  2021        PMID: 33410371      PMCID: PMC7832498          DOI: 10.1080/22221751.2021.1873073

Source DB:  PubMed          Journal:  Emerg Microbes Infect        ISSN: 2222-1751            Impact factor:   7.163


  29 in total

1.  Novel rapid identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) by real-time RT-PCR using BD Max Open System in Taiwan.

Authors:  Cherng-Lih Perng; Ming-Jr Jian; Chih-Kai Chang; Jung-Chung Lin; Kuo-Ming Yeh; Chien-Wen Chen; Sheng-Kang Chiu; Hsing-Yi Chung; Yi-Hui Wang; Shu-Jung Liao; Shih-Yi Li; Shan-Shan Hsieh; Shih-Hung Tsai; Feng-Yee Chang; Hung-Sheng Shang
Journal:  PeerJ       Date:  2020-06-17       Impact factor: 2.984

2.  Improved Molecular Diagnosis of COVID-19 by the Novel, Highly Sensitive and Specific COVID-19-RdRp/Hel Real-Time Reverse Transcription-PCR Assay Validated In Vitro and with Clinical Specimens.

Authors:  Jasper Fuk-Woo Chan; Cyril Chik-Yan Yip; Kelvin Kai-Wang To; Tommy Hing-Cheung Tang; Sally Cheuk-Ying Wong; Kit-Hang Leung; Agnes Yim-Fong Fung; Anthony Chin-Ki Ng; Zijiao Zou; Hoi-Wah Tsoi; Garnet Kwan-Yue Choi; Anthony Raymond Tam; Vincent Chi-Chung Cheng; Kwok-Hung Chan; Owen Tak-Yin Tsang; Kwok-Yung Yuen
Journal:  J Clin Microbiol       Date:  2020-04-23       Impact factor: 5.948

3.  A novel coronavirus outbreak of global health concern.

Authors:  Chen Wang; Peter W Horby; Frederick G Hayden; George F Gao
Journal:  Lancet       Date:  2020-01-24       Impact factor: 79.321

4.  Retrospective detection of SARS-CoV-2 in hospitalized patients with influenza-like illness.

Authors:  Xiaoqi Yu; Dong Wei; Yongyan Chen; Donghua Zhang; Xinxin Zhang
Journal:  Emerg Microbes Infect       Date:  2020-12       Impact factor: 7.163

5.  Clinical impact of molecular point-of-care testing for suspected COVID-19 in hospital (COV-19POC): a prospective, interventional, non-randomised, controlled study.

Authors:  Nathan J Brendish; Stephen Poole; Vasanth V Naidu; Christopher T Mansbridge; Nicholas J Norton; Helen Wheeler; Laura Presland; Stephen Kidd; Nicholas J Cortes; Florina Borca; Hang Phan; Gavin Babbage; Benoit Visseaux; Sean Ewings; Tristan W Clark
Journal:  Lancet Respir Med       Date:  2020-10-08       Impact factor: 30.700

6.  Clinical evaluation of the BioFire® Respiratory Panel 2.1 and detection of SARS-CoV-2.

Authors:  Hannah M Creager; Barbara Cabrera; Andy Schnaubelt; Jesse L Cox; Allison M Cushman-Vokoun; Salika M Shakir; Keith D Tardif; Meei-Li Huang; Keith R Jerome; Alexander L Greninger; Daria Drobysheva; Usha Spaulding; Margarita Rogatcheva; Kevin M Bourzac; S H Hinrichs; M J Broadhurst; P D Fey
Journal:  J Clin Virol       Date:  2020-07-06       Impact factor: 3.168

7.  Development of a reverse transcription-loop-mediated isothermal amplification as a rapid early-detection method for novel SARS-CoV-2.

Authors:  Yun Hee Baek; Jihye Um; Khristine Joy C Antigua; Ji-Hyun Park; Yeonjae Kim; Sol Oh; Young-Il Kim; Won-Suk Choi; Seong Gyu Kim; Ju Hwan Jeong; Bum Sik Chin; Halcyon Dawn G Nicolas; Ji-Young Ahn; Kyeong Seob Shin; Young Ki Choi; Jun-Sun Park; Min-Suk Song
Journal:  Emerg Microbes Infect       Date:  2020-12       Impact factor: 7.163

8.  The outbreak of Coronavirus Disease 2019 (COVID-19)-An emerging global health threat.

Authors:  Shajeea Arshad Ali; Mariam Baloch; Naseem Ahmed; Asadullah Arshad Ali; Ayman Iqbal
Journal:  J Infect Public Health       Date:  2020-03-19       Impact factor: 3.718

Review 9.  Co-infections among patients with COVID-19: The need for combination therapy with non-anti-SARS-CoV-2 agents?

Authors:  Chih-Cheng Lai; Cheng-Yi Wang; Po-Ren Hsueh
Journal:  J Microbiol Immunol Infect       Date:  2020-05-23       Impact factor: 4.399

10.  Characteristics of and Important Lessons From the Coronavirus Disease 2019 (COVID-19) Outbreak in China: Summary of a Report of 72 314 Cases From the Chinese Center for Disease Control and Prevention.

Authors:  Zunyou Wu; Jennifer M McGoogan
Journal:  JAMA       Date:  2020-04-07       Impact factor: 56.272

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  22 in total

Review 1.  Review of COVID-19 testing and diagnostic methods.

Authors:  Olena Filchakova; Dina Dossym; Aisha Ilyas; Tamila Kuanysheva; Altynay Abdizhamil; Rostislav Bukasov
Journal:  Talanta       Date:  2022-03-31       Impact factor: 6.556

2.  Singleplex, multiplex and pooled sample real-time RT-PCR assays for detection of SARS-CoV-2 in an occupational medicine setting.

Authors:  Kimberly S Butler; Bryan D Carson; Joshua D Podlevsky; Cathryn M Mayes; Jessica M Rowland; DeAnna Campbell; J Bryce Ricken; George Wudiri; Jerilyn A Timlin
Journal:  Sci Rep       Date:  2022-10-22       Impact factor: 4.996

Review 3.  Co-infection of SARS-CoV-2 and influenza viruses: A systematic review and meta-analysis.

Authors:  Thi Loi Dao; Van Thuan Hoang; Philippe Colson; Matthieu Million; Philippe Gautret
Journal:  J Clin Virol Plus       Date:  2021-08-09

4.  Analytical performances of the AMPLIQUICK® Respiratory Triplex assay for simultaneous detection and differentiation of SARS-CoV-2, influenza A/B and respiratory syncytial viruses in respiratory specimens.

Authors:  Ralph-Sydney Mboumba Bouassa; Serge Tonen-Wolyec; David Veyer; Hélène Péré; Laurent Bélec
Journal:  PLoS One       Date:  2022-01-05       Impact factor: 3.240

5.  SERS-based dual-mode DNA aptasensors for rapid classification of SARS-CoV-2 and influenza A/H1N1 infection.

Authors:  Hao Chen; Sung-Kyu Park; Younju Joung; Taejoon Kang; Mi-Kyung Lee; Jaebum Choo
Journal:  Sens Actuators B Chem       Date:  2021-12-30       Impact factor: 7.460

6.  Multicenter study evaluating one multiplex RT-PCR assay to detect SARS-CoV-2, influenza A/B, and respiratory syncytia virus using the LabTurbo AIO open platform: epidemiological features, automated sample-to-result, and high-throughput testing.

Authors:  Hsing-Yi Chung; Ming-Jr Jian; Chih-Kai Chang; Jung-Chung Lin; Kuo-Ming Yeh; Ya-Sung Yang; Chien-Wen Chen; Shan-Shan Hsieh; Sheng-Hui Tang; Cherng-Lih Perng; Feng-Yee Chang; Kuo-Sheng Hung; En-Sung Chen; Mei-Hsiu Yang; Hung-Sheng Shang
Journal:  Aging (Albany NY)       Date:  2021-12-12       Impact factor: 5.682

7.  Clinical Comparison of Three Sample-to-Answer Systems for Detecting SARS-CoV-2 in B.1.1.7 Lineage Emergence.

Authors:  Ming-Jr Jian; Hsing-Yi Chung; Chih-Kai Chang; Jung-Chung Lin; Kuo-Ming Yeh; Chien-Wen Chen; Shih-Yi Li; Shan-Shan Hsieh; Ming-Tsan Liu; Ji-Rong Yang; Sheng-Hui Tang; Cherng-Lih Perng; Feng-Yee Chang; Hung-Sheng Shang
Journal:  Infect Drug Resist       Date:  2021-08-17       Impact factor: 4.003

8.  Detection and Differentiation of SARS-CoV-2, Influenza, and Respiratory Syncytial Viruses by CRISPR.

Authors:  Huifen Zhou; Jen-Hui Tsou; Molangur Chinthalapally; Hongjie Liu; Feng Jiang
Journal:  Diagnostics (Basel)       Date:  2021-05-01

9.  Etiology of Severe Pneumonia in Children in Alveolar Lavage Fluid Using a High-Throughput Gene Targeted Amplicon Sequencing Assay.

Authors:  Fei Li; Yin Wang; Yuhan Zhang; Peng Shi; Linfeng Cao; LiYun Su; Qiguo Zhu; Libo Wang; Roujian Lu; Wenjie Tan; Jun Shen
Journal:  Front Pediatr       Date:  2021-06-25       Impact factor: 3.418

10.  Development of Multiplex RT-PCR with Immobilized Primers for Identification of Infectious Human Pneumonia Pathogens.

Authors:  S A Lapa; R A Miftakhov; E S Klochikhina; Yu I Ammur; S A Blagodatskikh; V E Shershov; A S Zasedatelev; A V Chudinov
Journal:  Mol Biol       Date:  2021-12-17       Impact factor: 1.374

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