Hydrogen bonding networks within hexavalent uranium materials are complex and may influence the overall physical and chemical properties of the system. This is particularly true if hydrogen bonding takes places between the donor and the oxo group associated with the uranyl cation (UO22+). In the current study, we evaluate the impact of charge-assisted hydrogen bonding on the vibrational modes of the uranyl cation using uranyl tricarbonate [UO2(CO3)3]4- interactions with [Co(NH3)6]3+ as the model system. Herein, we report the synthesis and structural characterization of five novel compounds, [Co(NH3)6]Cl(CO3) (Co_Cl_CO3), [Co(NH3)6]4[UO2(CO3)3]3(H2O)11.67 (Co4U3), [Co(NH3)6]3[UO2(CO3)3]2Cl (H2O)7.5 (Co3U2_Cl), [Co(NH3)6]2[UO2(CO3)3]Cl2 (Co2U_Cl), and [Co(NH3)6]2[UO2(CO3)3]CO3 (Co2U_CO3), which contain differences in the crystalline packing and extended hydrogen bonding networks. We show that these slight changes in the supramolecular assembly and hydrogen bonding networks result in the modification of modes as observed by infrared and Raman spectroscopy. We use density functional theory calculations to assign the vibrational modes and provide an understanding about how uranyl bond perturbation and changes in hydrogen bonding interactions can impact the resulting spectroscopic signals.
Hydrogen bonding networks within hexavalent uranium materials are complex and may influence the overall physical and chemical properties of the system. This is particularly true if hydrogen bonding takes places between the donor and the oxo group associated with the uranyl cation (UO22+). In the current study, we evaluate the impact of charge-assisted hydrogen bonding on the vibrational modes of the uranyl cation using uranyl tricarbonate [UO2(CO3)3]4- interactions with [Co(NH3)6]3+ as the model system. Herein, we report the synthesis and structural characterization of five novel compounds, [Co(NH3)6]Cl(CO3) (Co_Cl_CO3), [Co(NH3)6]4[UO2(CO3)3]3(H2O)11.67 (Co4U3), [Co(NH3)6]3[UO2(CO3)3]2Cl (H2O)7.5 (Co3U2_Cl), [Co(NH3)6]2[UO2(CO3)3]Cl2 (Co2U_Cl), and [Co(NH3)6]2[UO2(CO3)3]CO3 (Co2U_CO3), which contain differences in the crystalline packing and extended hydrogen bonding networks. We show that these slight changes in the supramolecular assembly and hydrogen bonding networks result in the modification of modes as observed by infrared and Raman spectroscopy. We use density functional theory calculations to assign the vibrational modes and provide an understanding about how uranyl bond perturbation and changes in hydrogen bonding interactions can impact the resulting spectroscopic signals.
Hydrogen bonding represents an important
interaction in chemical
systems, and the formation of hydrogen bond networks can directly
influence chemical and physical properties of solid-state materials.[1−6,5−19] The extent to which hydrogen bonding impacts the properties of high-valent
actinide materials is of interest because of the unique nature of
bonding within these complexes.[7] Uranium
is one of the most naturally abundant actinide elements and is commonly
found in the hexavalent oxidation state in aqueous solutions and oxidizing
conditions.[8] Typically, U(VI) engages in
covalent interactions with two oxygen atoms to create the linear triatomic
uranyl cation [O=U(VI)=O]2+ that further
coordinates to four, five, or six equatorial ligands to create a square,
pentagonal, or hexagonal coordination geometry.[9,10] Given
the strong bonding within the actinyl unit, the trans-oxo groups are considered weak Lewis bases that do not readily engage
in intermolecular interactions, including hydrogen bonding.[11] For example, Watson and Hay utilized density
functional theory (DFT) calculations to evaluate the geometries and
energetics of the uranyl oxo group as a hydrogen bond acceptor and
found that traditional hydrogen bond donors are actually repelled
by the oxo groups in [UO2(H2O)5]2+.[12]In a review compiled
by Fortier and Hayton, instances where uranyl
oxo groups interact with Lewis acids, including hydrogen atoms, were
highlighted, yet this interaction does not seem to disrupt the uranyl
bond to any extent as evidenced by U=O bond distances.[13] This suggests that the intermolecular forces
are quite weak and do not activate the oxo in any significant way.
However, there are instances, such as in Pacman pyrrole-imine macrocycles,
where the uranyl bond is perturbed by the presence of a hydrogen bond
because of the specific ligand architecture.[14−16] In addition,
Watson and Hay observed that the identity of the equatorial ligand
seems to play a role as the repellent nature of the uranyl oxo within
[UO2(H2O)5]2+ can become
attractive with the addition of nitrate groups to form [UO2(NO3)2(H2O)2]0.[12] Therefore, it is important to consider
what factors can increase the hydrogen bonding interaction to the
uranyl oxo and how this impacts the observable properties of the material.In the current study, we explore the influence of charge-assisted
hydrogen bonding on the uranyl oxo by investigating uranyl tricarbonate
coordination complexes [UO2(CO3)3]4– crystallized with [Co(NH3)6]3+ (Figure ). We hypothesized that a stronger hydrogen bond network, specifically
charge-assisted hydrogen bonds, would more readily interact with the
oxo atom, impact the overall bond strength within the uranyl cation,
and influence the related vibrational spectroscopy of the solid-state
material. Charge-assisted hydrogen bonds are unique because of the
ionic character of the acceptor and donor atoms, which strengthen
the electrostatic interaction of hydrogen bonds and have the potential
to weaken and elongate the uranyl bond.[17] Uranyl coordination compounds also have characteristic and identifiable
vibrational spectra, where the symmetric (v1) and the asymmetric
(v3) stretching bands of the uranyl are Raman- and IR-active,
respectively. Positional changes or shifts in vibrational signals
for characteristic UO22+ bands are commonly
attributed to the identity of the equatorial ligands, but additional
activation of bands may occur in the presence of hydrogen bond networks.[18−20] We hypothesized that the hydrogen bonding networks would lead to
distortion of the uranyl bond and result in modification of the asymmetric
and symmetric stretching band within the vibrational spectra. Uranyl
carbonate compounds are good model systems because they have been
studied thoroughly experimentally and computationally because of their
importance in geologic environments, aqueous systems, and the nuclear
fuel cycle.[8,21] Cobalt hexamine represents an
excellent hydrogen donor group because it possesses a high charge
density at the metal center, and multiple hydrogen atoms are available
for bonding interactions. Cobalt(III) hexamine has also been shown
to engage in charge-assisted hydrogen bonding within biological systems
and crystalline materials, including U(VI) compounds.[22−24] In the current study, we report the structural characterization
of five novel compounds with varied hydrogen bonding networks, [Co(NH3)6]Cl(CO3) (Co_Cl_CO), [Co(NH3)6]4[UO2(CO3)3]3(H2O)11.67 (Co4U3), [Co(NH3)6]3[UO2(CO3)3]2Cl(H2O)7.5 (Co3U2_Cl), [Co(NH3)6]2[UO2(CO3)3]Cl2 (Co2U_Cl), and [Co(NH3)6]2[UO2(CO3)3]CO3 (Co2U_CO). We utilize solid-state
Raman and IR spectroscopy to then evaluate the influence of the structurally
characterized hydrogen bonding network on the uranyl bond. In addition,
we employ DFT calculations to perform geometric and vibrational analysis
and calculate force constants which provide further insights into
the impact of charge-assisted hydrogen bonding in solid-state U(VI)
compounds.
Figure 1
Molecular units of (A) uranyl tricarbonate and (B) cobalt hexamine
that are utilized in this study to evaluate the impacts of charge-assisted
hydrogen bonding on the U=O bond.
Molecular units of (A) uranyl tricarbonate and (B) cobalt hexamine
that are utilized in this study to evaluate the impacts of charge-assisted
hydrogen bonding on the U=O bond.
Experimental Methods
Synthesis of Materials
Uranyl nitrate hexahydrate (UO2(NO3)2·6H2O) was purchased
from Flinn Scientific Inc. Caution! Uranyl nitrate hexahydrate
[UO2(NO3)2]·6H2O
contains U-238, a naturally radioactive element. All uranium-bearing
materials should be handled with standard precautions and by trained
personnel. Tetramethyl ammonium hydroxide (TMAOH) 25% in water, cobalt(III)
hexamine chloride ([Co(NH3)6]Cl3),
and potassium carbonate (K2CO3) and sodium carbonate
(Na2CO3) were purchased from Acros Organics,
TCI, and Sigma-Aldrich, respectively. All chemicals were used as received,
and stock solutions were prepared with millipure (18 MΩ) water.
[Co(NH3)6]Cl(CO3) (Co_Cl_CO)
Equivalent amounts (1.0 mL) of a 0.18 M
[Co(NH3)6]Cl3 solution were added
to 0.20 M K2CO3 and millipure water in a 20
mL glass scintillation vial. The vial was left uncapped to encourage
slow evaporation and reddish-brown crystals with a prismatic morphology
formed over 12 h with a 60% yield based upon Co.
[Co(NH3)6]4[UO2(CO3)3]3H2O11.67 (Co4U3)
In a 20 mL glass scintillation vial, 0.18
M [Co(NH3)6]Cl3 (0.5 mL) was added
to 1 mL of 0.2 M UO3 dissolved within the K2CO3 stock solution and 1 mL of millipure water. The solution
slowly evaporated at room temperature, and orange blocks formed after
1 day. Percent yield of the Co4U3 synthesis is 60% based
upon Co.
[Co(NH3)6]3[UO2(CO3)3]2Cl H2O7.5 (Co3U2_Cl)
Aliquots of a 0.1 M uranyl nitrate stock
solution (0.50 mL), 0.1 M TMAOH (0.15 mL), 0.46 M [Co(NH3)6]Cl3 (0.45 mL), and 1.0 mL of 1.0 M K2CO3 were combined in a 10 mL glass vial and placed
in a refrigerator uncapped for 4 days. Orange crystals formed with
a plate morphology with yields of <10% based upon Co.
[Co(NH3)6]2[UO2(CO3)3]Cl2 (Co2U1_Cl)
A 0.18 M [Co(NH3)6]Cl3 solution
(1 mL) was combined with 1 mL of 0.2 M UO3 in 0.2 M K2CO3 and 3 mL of millipure water. The vial was left
uncapped, and light orange columnar crystals formed after 1 day in
yields of 48% based upon Co.
[Co(NH3)6]2[UO2(CO3)3]CO3H2O3 (Co2U1_CO)
Aliquots of a 0.1 M uranyl
nitrate stock solution (1 mL), 0.1 M TMAOH (0.3 mL), 0.18 M [Co(NH3)6]Cl3 (1 mL), and 1 mL of 1.0 M K2CO3 were combined in a 10 mL glass vial and left
uncapped for 5 days. Orange crystals with a columnar morphology were
produced in yields of 30% based upon Co.Compounds Co3U2_Cl and Co2U1_CO could also be synthesized
without the addition of the carbonate anion if the solutions were
left exposed to standard atmospheric conditions in the laboratory.
For Co3U2_Cl, aliquots of the 0.1 M uranyl nitrate stock
solution (1 mL), 0.1 M TMAOH (0.3 mL), and 0.01 M [Co(NH3)6]Cl3 (1 mL) were combined in a 20 mL glass
scintillation vial. The pH of the solution was initially 12, and a
solid yellow precipitate formed on the bottom of the vial. This initial
solid dissolved after 18 h, and the clear orange solution was allowed
to slowly evaporate for 3 days in an uncapped vial to produce orange
plates of Co3U2_Cl. Co2U1_CO formed from a similar synthetic condition where the 0.1 M uranyl
nitrate stock solution (1.0 mL) and 0.1 M TMAOH (0.3 mL) were added
to a 20 mL glass scintillation vial. In the case of Co2U1_CO, a higher concentration of [Co(NH3)6]Cl3 (1.0 mL of 0.18 M) was also added to the solution.
An initial yellow precipitate again formed and then re-dissolved after
24 h. After 3 days of slow evaporation in an uncapped vial, orange
rods of Co2U1_CO crystallized from the mother
liquor.This process fits well with what is currently understood
for U(VI)
chemistry under basic conditions (pH 12). Initially increasing the
pH will result in U(VI) hydrolysis, which will cause precipitation
of kinetically stable oxyhydroxide phase values.[25] When water is in equilibrium with the atmosphere, it will
contain dissolved CO2 at concentrations that are controlled
by Henry’s law. This means that at pH 12, with 400 ppm CO2 in the air, we will reach levels greater than 10–1 moles of dissolved CO2 per liter (where dissolved CO2 is equal to H2CO3 + HCO3– + CO32–).[26] At these concentrations, the uranyl tricarbonate
phase is the only species present for U(VI) at these pH values.[25]
Single-Crystal X-ray Diffraction
Single crystals of
each coordination compound were visually identified on a polarized
microscope, harvested from their respective mother liquors, and mounted
on a MiTeGen MicroMount using NVH immersion oil (Cargille Labs). Structural
information was collected on a Bruker D8 Quest single-crystal X-ray
diffractometer equipped with a microfocus beam (Mo Kα; λ
= 0.71073 Å) and an Oxford Systems low temperature cryosystem.
Data were collected with the Bruker APEX3 software package,[27] and peak intensities were corrected for Lorentz,
polarization, background effects, and absorption. The structure solution
was determined by intrinsic phasing methods and refined on the basis
of F2 for all unique data using the SHELXTL
version 5 series of programs.[28] Metal atoms
(U, Co) were located by direct methods, and the C, O, N, and Cl atoms
were identified and modeled from the difference Fourier maps after
partial refinement.Many of the compounds contained positional
disorder, which was accounted for by considering partial occupancy
and split sites. Co4U3 displayed disorder associated
with the [UO2(CO3)]4– complex
that resulted in unreasonable U–U distances if the complex
was fully occupied. Additional unit cell parameters were evaluated
using CELLNOW, and doubling of the axes or lowering the symmetry of
the space group did not rectify the positional disorder. The complex
was successfully modeled using partial occupancy (50%) as evidenced
by reasonable displacement parameters and bond distances/angles. Co3U2_Cl was originally solved in the hexagonal, P-3 space group, but significant disorder and unreasonable displacement
parameters suggested that a lower symmetry space group was more appropriate.
The lowest Rint value and most reasonable
displacement values were achieved in an orthorhombic space group (Cmma) and resulted in the most agreeable thermal displacement
parameters. Co2U1_Cl was placed in a triclinic P-1 space group, after multiple attempts to model the lattice
Cl over several crystallographic positions did not provide proper
thermal parameters or charge neutrality. Co2U1_CO solved in the hexagonal space group P-3
and displayed disorder associated with one cobalt hexamine cation.
One disordered water was also modeled as partially occupied over three
positions in the lattice, while the interstitial carbonate anion required
a DFIX constraint to enable reasonable C–O bond distances.
Carbonate anions coordinated to the U(VI) atom in Co2U1_CO also contained displayed disorder for one of the O
atoms and were modeled as 50% occupied over two crystallographic positions.Hydrogen atoms were included on all well-ordered NH3 and H2O molecules for the CoU compounds. A riding model
was used to place the hydrogen atoms on the amine groups of the [Co(NH3)6]3+ cation, except for the Co(2) atom
in Co2U1_CO because there was significant
disorder of the amine groups about the metal center. Water molecules
within the lattice were also modeled with H atoms when possible, and
the crystallographic positions of these atoms were in the difference
Fourier map after modeling electron density of all the heavier atoms
in the lattice. The bond distances and angles of the H atoms associated
with the water molecules were restrained using DFIX and DANG commands.Selected crystallographic parameters can be found in Table and additional bonding information
regarding the Co and interstitial anions/molecules can be found in
the Supporting Information in Tables S1–S5. Images depicting the asymmetric unit with thermal ellipsoids for
each of the compounds can also be found in the Supporting Information
(Figures S1–S5). Crystallographic
information files can be found on the Cambridge Structural Database
by requesting numbers 2177491–2177495.
Table 1
Select Crystallographic Parameters
for [Co(NH3)6]Cl(CO3) (Co_Cl_CO), [Co(NH3)6]4[UO2(CO3)3]3(H2O)11.67 (Co4U3), [Co(NH3)6]3[UO2(CO3)3]2Cl (H2O)7.5 (Co3U2_Cl), [Co(NH3)6]2[UO2(CO3)3]Cl2 (Co2U1_Cl), and [Co(NH3)6]2[UO2(CO3)3]CO3(H2O)3 (Co2U1_CO)
Co_Cl_CO3
Co4U3
Co3U2_Cl
Co2U1_Cl
Co2U1_CO3
empirical formula
CN6H18O3CoCl
C9N24H69O44.67U3Co4
C6N18H69O29.5U2Co3Cl
C3N12H36O14UCo2Cl2
C4N12H42O17Uco2
formula weight
256.56
2178.14
1553.73
891.13
886.16
space group
P213
P21/n
Cmma
P-1
P-3
a (Å)
9.9014(5)
16.978(5)
25.2392(19)
6.8093(3)
15.5979(5)
b (Å)
9.9014(5)
7.780(3)
15.1709(13)
12.5621(7)
15.5979(5)
c (Å)
9.9014(5)
23.796(7)
12.9936(13)
14.2362(7)
6.5340(2)
α (°)
90
90
90
92.979(2)
90
β (°)
90
95.835
90
91.030(2)
90
γ (°)
90
90
90
103.331(2)
90
V (Å3)
970.7(1)
3127.0(2)
4975.3(8)
1182.77(10)
1376.7(1)
Z
4
2
4
2
1
ρ
(g/cm3)
1.756
8.892
7.613
8.515
7.143
μ (mm–1)
2.030
2.334
1.982
2.413
2.102
F(000)
536
2103
2720
828
834
θ range (°)
2.909–25.983
2.412–26.143
2.250–26.369
2.136–26.110
3.464–26.839
limiting indices
–12 ≤ h ≤ 12
–21 ≤ h ≤ 21
–31 ≤ h ≤ 31
–8 ≤ h ≤ 8
–19
≤ h ≤ 19
–12 ≤ k ≤ 12
–9 ≤ k ≤ 9
–18
≤ k ≤ 18
–15 ≤ k ≤ 15
–19 ≤ k ≤ 19
–12
≤ l ≤ 12
–29 ≤ l ≤ 29
–16 ≤ l ≤ 16
–17 ≤ l ≤ 17
–8 ≤ l ≤ 8
refl. collected/unique
34,609/637
87,272/6222
123,734/2707
32,224/4535
20,496/1969
Rint
0.0521
0.0658
0.0513
0.0384
0.0568
data/restraints/parameters
650/6/39
6222/12/479
2707/148/0
4708/0/331
1969/3/122
GOF on F2
1.190
1.059
1.089
1.115
1.253
final R indices
R1 = 0.0182
R1 = 0.0227
R1 = 0.0543
R1 = 0.0242
R1 = 0.0345
[I > 2σ(I)]
wR2 = 0.0477
wR2 = 0.0555
wR2 = 0.1635
wR2 = 0.0579
wR2 = 0.1007
R indices (all data)
R1 = 0.0192
R1 = 0.0273
R1 = 0.0568
R1 = 0.0257
R1 = 0.0361
wR2 = 0.0488
wR2 = 0.0576
wR2 = 0.1671
wR2 = 0.0579
wR2 = 0.1014
largest peak and hole
0.220 to −0.454
1.286 to −0.782
2.965 to −5.237
2.209 to −2.058
2.538 to −1.154
Powder X-ray Diffraction
Purity of the bulk crystalline
material was confirmed by powder X-ray diffraction using a Bruker
D-5000 Advanced Powder Diffractometer equipped with Cu Kα radiation
(λ = 1.5418 Å) and a LynxEye solid-state detector. Data
were collected from 2 to 40° 2θ with a step size of 0.02°
2θ and a count time of 0.5 s/step. Predicted X-ray diffraction
patterns were plotted using the Mercury Software version 3.1 and compared
to the experimental data. Diffractograms of the experimental and calculated
patterns can be found in the Supporting Information (Figures S6–S10).
Vibrational Spectroscopy
Solid-state compounds were
analyzed by Fourier transform infrared (FTIR) and Raman spectroscopy.
After confirming the bulk purity of the material, approximately 5
mg of the sample was mixed with KBr and pressed into translucent disks
for analysis on a Nicolet Nexus 760 FTIR Spectrometer. Infrared spectra
were collected from 500 to 4000 cm–1 with a resolution
of 2 cm–1. Solid-state Raman spectra were collected
on a SnRI High-Resolution Sierra 2.0 Raman spectrometer equipped with
785 nm laser energy and 2048 pixels TE-cooled CCD. Laser power was
set to the maximum output value of 15 mW, and the system was configured
to acquire data by the Orbital Raster Scanning mode, giving the highest
achievable spectral resolution of 2 cm–1. Each sample
was irradiated for an integration time of 60 s and automatically reiterated
six times in multiacquisition mode. The average of the six Raman spectra
collected for a sample is reported as the final Raman spectrum. Because
of smaller yields, the solid-state Raman spectra for Co4U3 and Co2U1 were collected on a Renishaw inVia confocal
Raman microscope with a Leica DM2700 series microscope using a 785
nm laser and a CCD detector. Each sample was isolated, mounted to
a glass slide using double-sided tape, and loaded onto the sample
stage. Laser focusing was performed by utilizing the confocal microscope,
and the spectra were collected from 200 to 3000 cm–1. To accurately process the vibrational spectra, the background was
subtracted, multiple peaks were fit using the peak analysis protocol
with Gaussian functions, and all the fitting parameters converged
with a chi-squared tolerance value of 10–14 in the
OriginPro 9.1.0 (OriginLab, Northampton, MA) 64-bit software.[29]
DFT Methods
DFT calculations were used to gain a deeper
understanding of the hydrogen bonding interactions that occur within
these systems. Initial geometries for the DFT calculations were isolated
molecular models generated based on the experimental crystal information
files (CIFs) obtained from the structural analysis of the CoU compounds. Because of the disorder present in Co3U2_Cl, only the
distances and geometries of central atoms were considered. This molecular
approach allows us to systematically induce subtle structural changes
in the coordination environment of the uranyl cation and incrementally
increase the H-bonding present, which affords for a methodical analysis
of the roles these features have on the vibrational spectroscopy.
Full geometry optimization and vibrational analysis calculations were
conducted using the Becke 3-parameter Lee-Yang-Par (B3-LYP) hybrid
functional within the TURBOMOLE 7.2 software package and the default
triple-zeta valence polarized (def-TZVP) basis set for U, Co, C, O,
and N atoms.[30−33] SCF energy converged to at least 0.3 meV, and forces were converged
to a minimum of 5 meV Å–1. The potential between
system electros and U is accounted for using the small-core (60 core
electrons) relativistic effective core potential (RECP) by Dolg and
co-workers.[34] The isolated molecular models
were embedded in the continuum solvent model COSMO with a dielectric
constant (ε) of 78.54 to simulate aqueous solvent contributions
to the electrostatics.[35]To systematically
explore how the ν1 and ν3 uranyl
stretching modes are influenced by perturbations to the bonding environment,
two DFT studies utilized fixed geometries paired with vibrational
analysis. Both the free UO22+ cation and then
the [UO2(CO3)3]4– complex were isolated from the Uco compounds and then
allowed to relax to the energy minimized form. Then the U=O
bonds in both complexes were varied in step sizes of 0.02 Å,
and the vibrational analysis was performed to explore the impact on
the position of the stretching modes. A second series of calculations
evaluated the effects of counter-cation interactions on the U=O
stretching bands by fixing the [Co(NH3)6]3+ positions relative to the [UO2(CO3)3]4–. Jaquet and Haeuseler
reported similar methodologies as a means to evaluate simulate coordination
environments that were associated with the crystallographic positions.[36] Unconstrained [UO2(CO3)3]4– + [Co(NH3)6]3+ calculations were first fully optimized, and subsequent
molecular models fixed the positions of the [Co(NH3)6]3+ cations according to data obtained from the
structural characterization of the solid UCo compounds. Vibrational
modes were calculated in these specific environments to evaluate changes
in the expected spectral features. For all calculations, SCF energy
was converged to at least 0.3 meV, and forces were converged to at
least 5 meV Å–1.
Results and Discussion
Structural Analysis
The first reported compound (Co_Cl_CO) does not contain U(VI) within the crystalline
lattice but serves as a model compound for the spectral signals associated
with [Co(NH3)6]3+ and CO32– ions within the solid phase (Figure SI1). This
cobalt hexamine complex contains six Co–N bonds at distances
of 1.963(2) to 1.964(2) Å, and the crystalline lattice contains
a single chloride anion and a carbonate anion with C–O bond
distances of 1.287(2) Å. Hydrogen bonding occurs between the
H atoms on the amine groups and oxygen atoms on the carbonate anion
with donor to acceptor (D-H···A) distances ranging
from 2.848 to 3.004 Å.Each of the other four compounds
reported in this study contains the [UO2(CO3)3]4– coordination complex and exhibits
subtle differences in U=O bond distances (Table ). In all cases, the U(VI) cation
is strongly bound to two oxygen atoms to create the nearly linear
dioxo cation (UO22+) with bond lengths ranging
from 1.757(11) to 1.801(4) Å. Three of the four compounds contain
symmetric U=O bond lengths within the uranyl moiety, and only
in the case of Co3U2_Cl do we notice a slight asymmetry
in the uranyl bonds, with a difference of 0.02 Å. Therefore,
we did not observe significant asymmetry in the uranyl bond within
any of the compounds presented herein. In all cases, three carbonate
anions surround the uranyl cation through the equatorial plane in
a bidentate coordination mode. Equatorial bond distances within this
metal complex range from 2.393(4) to 2.461(6) Å among the four
compounds. This leads to an overall hexagonal bipyramidal coordination
geometry and results in the [UO2(CO3)3]4– species.
Table 2
Summary of Bond Distances for the
[UO2(CO3)3]4– Complex
in Co4U3, Co3U2_Cl, Co2U1_Cl, and Co2U1_CO and Literature Values for
Bond Distances and Reported Vibrational Bands for the Uranyl Cation
within Coordination Compounds Containing [UO2(CO3)3]4–
compound
U=O axial (Å)
U–O equatorial (Å)
reported UO22+ spectral modes (cm–1)
reference
Co4U3
1.796(3), 1.798(3)
2.412(3)–2.434(3)
805a
this work
1.781(5), 1.793(5)
2.409(6)–2.461(6)
Co3U2_Cl
1.76(1), 1.78(1)
2.415(9)–2.423(7)
809a
this work
Co2U1_Cl
1.798(4), 1.801(4)
2.393(4)- 2.438(4)
807a
this work
Co2U1_CO3
1.771(8), 1.776(8)
2.435(5)–2.439(5)
806a
this work
NH4[(UO3)(CO3)3]
1.79(1)
2.44(1)–2.46(1)
831, 883
Graziani et al.,[37] Čejka,
Novitskiy et al.[38,48]
[C(NH2)3]4[(UO2)(CO3)3]
1.78(1), 1.80(2)
2.440
(6)–2.451(2)
831(ν1), 892(ν3)
Fedoseev et al.,[58] Allen et al.[39]
[N(CH3)4]4[(UO3)(CO3)3] (H2O)8
1.803(3), 1.814(3)
2.418(3)–2.450(3)
Reed et al.[40]
Na4[UO2(CO3)3]
1.807(5), 1.814(5)
2.385(4)–2.427(3)
810, 816(ν1), 843(ν3)
Li et al.,[79] Čejka[38,41]
Na2Ca[(UO2)(CO3)3](H2O)6
1.81(2),
1.78(2)
2.41(1)–2.46(1)
833(ν1), 919 (ν3)
Coda et al.,[43] Driscoll et al.[80]
Na2Rb2[UO2(CO3)3]
1.779(8)
2.418(8)–2.433(6)
Kubatko and
Burns[44]
Na6Mg[UO2(CO3)3]2(H2O)6
1.792(6)
2.392(7)–2.486(7)
Olds et al.[45]
Mg2[(UO2)(CO3)3](H2O)18
1.788(4), 1.785(4)
2.419(4)–2.457(4)
822, 875
Mayer and Mereiter,[42] Colmenero
et al.,[46] Amayri et al.[47]
K4[(UO2)(CO3)3]
1.802
2.425(4)–2.434 (4)
815, 881
Anderson et al.,[81] Novitskiy et
al.[48]
K2Ca3[(UO2)(CO3)3]2(H2O)8
1.781(4), 1.769(4)
2.423(4)–2.444(4)
Plášil
et al.[49]
1.791(4)
2.400(4)–2.454(4)
1.775(4),
1.798(4)
2.404(4)–2.441(4)
Rb4[(UO2)(CO3)3]
1.79(1)
2.43(1)–2.45(1)
828, 877
Chernorukov et al.,[50] Gorbenko-Germanov
and Zenkova[51]
Cs4[(UO2)(CO3)3]
1.806(4)
2.420(4) -2.435(4)
808,
877
Krivovichev, Burns, Gorbenko-Germanov and Zenkova[51,52]
Ca2[(UO2)(CO3)3](H2O)11
1.784(7), 1.774(7)
2.417(6)–2.448(7)
822, 902, 885, 883
Mereiter[53]
Ca9[(UO2)(CO3)3]4(CO3)(H2O)28
1.773(9), 1.779(9)
2.411(5)–2.481(5)
Kampf et al.[54]
1.76(9), 1.773(9)
2.416(6)–2.457(5)
CaMg[(UO2)(CO3)3](H2O)12
1.777(3), 1.788(3)
2.412(3)–2.457(3)
Mereiter[55]
See Table for additional information on the uranyl
stretching modes associated with these compounds.
See Table for additional information on the uranyl
stretching modes associated with these compounds.
Table 3
Observed Raman Frequencies for Solid-State
Raman Spectra and the IR Frequencies of [Co(NH3)6]Cl(CO3) (Co_Cl_CO), [Co(NH3)6]4[UO2(CO3)3]3(H2O)11.67 (Co4U3), [Co(NH3)6]3[UO2(CO3)3]2Cl(H2O)7.5 (Co3U2_Cl), Co(NH3)6]2[UO2(CO3)3]Cl2 (Co2U1_Cl), and [Co(NH3)6]2[UO2(CO3)3]CO3(H2O)3 (Co2U1_CO) within
the Spectral Window of Interest (500–1100 cm–1)
Co_Cl_CO3
Co4U3
Co3U2_Cl
Co2U1_Cl
Co2U1_CO3
assignment
R
IR
R
IR
R
IR
R
IR
R
IR
1070
NH3 breathing
1053
1058
1065
1057
1056
ν4CO32– breathing
1052
1054
1049
1051
ν4CO32– breathing + NH3 twist
1041
1008
1041
1044
1043
ν4CO32– breathing
+ NH3 twist
957
ν3UO22+ + NH3 twist
950
948
ν3UO22+ + NH3 twist
940
NH3 twist + ν3UO22+
922
NH3 twist
+ ν3UO22+
888
896
889
881
888
NH3 twist + ν3UO22+
869
876
871
NH3 twist + ν3UO22+
854
856
859
NH3 rocking
832
845
832
833
NH3 rocking
827
CO32–
805
809
807
806
ν1UO22+ + CO3 wag
753
NH3 breathing + ν1UO22+
727
734
728
726
ν1UO22+ + ν2CO3
719
721
720
719
720
722
ν2CO32–
704
H2O libration
684
690
692
696
693
691
ν2CO32– + NH3 twist
685
668
H2O libration
Notable differences in the structural arrangement
within the CoU compounds are variations in the molar
ratio of the cobalt
hexamine cation and the uranyl tricarbonate anion. In the case of Co4U3, we observe a Co:U ratio of 1.33 to give a formula of
[Co(NH3)6]4[UO2(CO3)3]3, and no additional charge balancing
anions or cations are necessary to neutralize the overall charge of
the compound. Water molecules are located throughout the crystalline
lattice of Co4U3 that results in the overall structural
formula of [Co(NH3)6]4[UO2(CO3)3]3H2O11.67. Increasing the Co:U ratio to 1.5 in Co3U2_Cl results
in the need to include additional charge balancing anions within the
lattice, and we determined that the structure contained an additional
Cl– anion located within four partially occupied
sites. The Cl– anion is present in significant quantities
because of the addition of the cobalt hexamine chloride reagent. Additional
water molecules are again present, and the overall formula for Co3U2_Cl is [Co(NH3)6]3[UO2(CO3)3]2Cl(H2O)7.5. Both Co2U1_Cl and Co2U1_CO possessed a Co:U ratio of 2:1 and required an additional
−2 charge compensation to create neutrality. The negative charge
is achieved through the incorporation of either two Cl– (Co2U1_Cl) or one CO32– anion (Co2U1_CO) and results in overall
formulas of [Co(NH3)6]2[UO2(CO3)3]Cl2 and [Co(NH3)6]2[UO2(CO3)3]CO3(H2O)3, respectively.Comparisons between the CoU compounds and other uranyl
tricarbonate phases reported in the literature indicated similarities
in relative ratios of charge balancing constituents and bond distances
(Table ). The uranyl
(U=O) bond lengths in this class of compounds ranged from 1.73(4)
to 1.85(4) Å, and the U–O equatorial distances occurred
between 2.38(4) to 2.48(4) Å. All CoU compounds
exhibit bond distances within this range. A majority of the uranyl
tricarbonate compounds exhibited symmetric U=O bond lengths
within the uranyl moiety, except in the case of the mineral Paddlewheelite
(MgCa5Cu2[(UO2)(CO3)3]4(H2O)33).[45] In this case, there is significant asymmetry in the uranyl
bond that ranges from 0.02 to 0.07 Å. The largest asymmetry in
the U=O bond (0.07 Å) within Paddlewheelite occurs in
the region where there are significant differences in the intermolecular
interactions that occur between the oxo groups and neighboring cations
and hydrogen bond donors. However, most of the previously reported
uranyl bond asymmetry is similar to the value observed within the Co3U2_Cl coordination compound (0.02 Å).Intermolecular
interactions within the CoU compounds
occur through charge-assisted hydrogen bonding that takes place between
the cobalt hexamine donors and the uranyl oxo acceptor groups. An
extensive hydrogen bonding network is noted within the solid-state
compounds, and significant differences are observed based upon the
arrangement of the [Co(NH3)6]3+ cations
(Figure ). Co4U3 displays symmetric bifurcated hydrogen bonding between the uranyl
oxo groups and the [Co(NH3)6]3+ cations
(Figure a). Hydrogen
bonding distances are relatively long, with distances ranging from
2.96 to 3.01 Å. Stronger interactions occur between the carbonate
anions and water molecules located in the interstitial region (2.734–2.809
Å). The uranyl oxo groups in compound Co3U2_Cl engage
in asymmetric H-bonding interactions because of the arrangement of
the counterions within the layers. We note that in this compound,
the O1 atom acts as a H bond acceptor to two different donors (N6)
at a donor to acceptor distance (D–H···A) of
2.96 Å (Figure b). Donor (N5) to acceptor (O2) distances for the hydrogen bonding
interactions occurring at the second oxo group are similar in distance
(2.94 Å), but again the uranyl bond distance is asymmetric. Hydrogen
bonding in compound Co2U1_CO follows the
symmetric nature of the [Co(NH3)6]3+ cations and exhibits interactions to oxygen acceptors on the uranyl
moiety and carbonate anion (Figure d). Each oxo group (O1 and O2) interacts in a symmetric
fashion to hydrogen atoms on the cobalt hexamine cation with D–H···A
distances of 2.97 and 3.01 Å, respectively. The arrangement of
the [Co(NH3)6]3+ cations around the
oxo groups leads to trifurcated H-bonding to each layer of [UO2(CO3)3]4–. In addition,
the carbonate anions also participate in H-bonding with the oxygen
atoms (O3, O4, and O5) linked to the U(VI) metal center. Again, the
uranyl bond distance is symmetric, and each O atom can interact with
H atoms located above and below the uranyl tricarbonate complex with
D–H···A distances ranging from 2.95 to 3.00
Å. Co2U1_Cl (Figure c) shows a similar hydrogen bonding network to Co2U1_CO, with slight differences in the donor
to acceptor distances (2.893–3.28 Å).
Figure 2
Hydrogen bonding for
the cobalt hexamine to the uranyl tricarbonate
compounds, showing differences in the arrangement of the [Co(NH3)6]3+ counterions and hydrogen bonding
networks for Co4U3, Co3U2_Cl, Co2U1_Cl, and Co2U1_CO3. The U, Co, Cl, O, N, and C atoms are
depicted as yellow, dark blue, green, red, light blue, and black spheres,
respectively. The H atoms have been removed for clarity. Hydrogen
bonding is illustrated using dashed red lines.
Hydrogen bonding for
the cobalt hexamine to the uranyl tricarbonate
compounds, showing differences in the arrangement of the [Co(NH3)6]3+ counterions and hydrogen bonding
networks for Co4U3, Co3U2_Cl, Co2U1_Cl, and Co2U1_CO3. The U, Co, Cl, O, N, and C atoms are
depicted as yellow, dark blue, green, red, light blue, and black spheres,
respectively. The H atoms have been removed for clarity. Hydrogen
bonding is illustrated using dashed red lines.Synthetic compounds containing the uranyl tricarbonate
anion and
hydrogen bond donors have been previously reported, but there is little
evidence of this type of interaction occurring with the uranyl oxo
groups in these materials. The ammonium cation can cocrystallize with
the [UO2(CO3)3]4– complex and engages in medium strength H-bonding based upon Jeffrey’s
classification (D–H···A = 2.85–3.22 Å).[37,56] All the NH4+ cations were located either below
and above the equatorial plane of the uranyl cation but only participate
in H-bonding with the O atoms of the bound CO3– anions. A H-bonding network within the tetramethylammonium uranyl
tricarbonate compound has also been delineated, and again the uranyl
oxo groups do not participate in additional intermolecular interactions
with the hydrogen bond donors.[57] Within
the guanidinium system, the trimeric species [(UO2)3(CO3)6]6– was the
major species isolated, but [C(NH2)3]4[(UO2)(CO3)3] has also been reported
by Fedosseev and co-workers.[58] In both
cases, no hydrogen bonds were observed between the guanidinium cations
and the uranyl oxo groups.Evaluation of the uranyl carbonate
literature suggests that the CoU compounds are unique
in that the uranyl oxo groups do
participate in the hydrogen bonding network created by the cobalt
hexamine cation. As mentioned in the Introduction section, the cobalt hexamine cation was chosen specifically to engage
the uranyl oxo groups because of the high charge density associated
with the complex. We observe this to occur within the compounds presented
herein, and the H-bonds can all be classified using the categories
delineated by Jeffrey as medium strength.[59,60] The [Co(NH3)6]3+ cation has also
been previously reported to crystallize other uranyl coordination
complexes, including substituted malonato and tetrahydroxide complexes.[61−63] Extensive hydrogen bonding networks occur within both systems that
include interactions between the amine and uranyl oxo groups; however,
the hydrogen bonding strength is much weaker for the malonato and
tetrahydroxide complexes (average D–H···A distances
= 3.2(1) Å). Clark et al. discussed the H-bonding interactions
in relation to the uranyl oxo distances, pointing out that the shortest
bond (1.802(6) Å) showed only one interaction to the [Co(NH3)6]3+ unit and the longest U=O
bond at 1.835(5) Å possessed multiple hydrogen bonds.[63]Within the evaluation of [Co(NH3)6]2[UO2(OH)4)]3H2O, Clark
et al. also noted that there was a 10 cm–1 difference
between uranyl symmetric stretching (ν1) mode of
the solid and that of the related solution phase. It was suggested
that this difference could be due to variability in the number of
hydro ligands attached the uranyl cation or the impact of hydrogen
bonding within the solid-state material. Additional experimental and
computational analysis has indicated that the uranyl tetrahydroxide
is the dominant species under alkaline conditions, so the impact of
hydrogen bonding is the likely explanation of this spectral variability.[64,65] Thus, we turn to vibrational analysis to further identify the impact
of hydrogen bonding within the CoU materials.For this work, we will focus
specifically on the uranyl symmetric stretch (ν1)
and asymmetric stretch (ν3) associated with the uranyl
cation. If one considers the uranyl point group symmetry to be D∞, then the symmetric
and asymmetric stretches are predicted to be Raman- and IR-active,
respectively. However, U=O bond perturbation can result in
lower symmetry of the uranyl cation through either bond asymmetry
(C∞) or bending
(C2) that would result
in activation of both the ν1 and ν3 bands in the Raman and IR spectra. Additional combination modes
with the carbonate ligands and the cooperative nature of the hydrogen
bonding network can also influence the spectral signals.[46] To focus specifically on these issues, we evaluated
the spectral window 700–1100 cm–1 to capture
major features of the uranyl, carbonate, and cobalt hexamine components
(Figure and Table ). Assignments were determined based upon the DFT spectral
band analysis. Additional spectral features associated with the [Co(NH3)6]3+ are observed between 300 and 500
cm–1, and full spectra are provided in the Supporting
Information (Figure S8).
Figure 3
Solid-state vibrational
spectra of (a) Co4U3, (b) Co3U2_Cl, (c) Co, and (d) Co2U1_CO. IR spectra are on top, while Raman spectra
are located on the bottom for each sample.
Solid-state vibrational
spectra of (a) Co4U3, (b) Co3U2_Cl, (c) Co, and (d) Co2U1_CO. IR spectra are on top, while Raman spectra
are located on the bottom for each sample.Variability in the spectral signals is observed in
the CoU compounds
that are associated with differences in the hydrogen bonding network. Co_Cl_CO only exhibits one band in the spectral
window of interest (1053 cm–1) that corresponds
to the ν4 CO32– breathing
mode. In the presence of UO22+, multiple bands
are observed which correspond to concerted motion. Some of these bands
(726–734 cm–1) are associated with concerted
motions between the uranyl cation and the bound carbonate anion. In
addition, the hydrogen bonding interactions between the uranyl oxo
groups and the cobalt hexamine cation lead to a concerted uranyl stretching
with NH3 twisting motions (753, ∼805, 856, 881,
and 891 cm–1). Similar hydrogen bonding interactions
the amine group and the carbonate anion also exist and lead to multiple
bands associated with the CO32– breathing
modes between 1041 and 1065 cm–1.One notable
band in Co3U2_Cl is located at 950 cm–1 and could be assigned to the activated ν3 asymmetric
stretching vibration for the uranyl cation, twisting
of the amine group associated with the [Co(NH3)6]3+ cation, or a combination of the two modes together.
This modified vibrational signal does pair with the subtle asymmetry
of the uranyl bond length noted in this compound that may lower the
overall point group symmetry and lead to an observable peak in the
Raman spectra. However, a difference of only 0.02 Å is quite
small, and this asymmetry alone may not account for this specific
band. Thus, it is more likely that it is associated with the concerted
NH3 twisting and asymmetric stretching of the uranyl that
gives rise to the band in the spectra.Infrared spectroscopy
was also performed for all compounds and
allows us to confirm the position of the ν3 bands.
Multiple bands are present in the 870–960 cm–1 region that correspond to concerted motions between the amine and
the uranyl oxo groups. Both Co2U1 compounds contain fewer
bands in this region and may be related to the trifurcated, symmetric
bonding that exists between the cobalt hexamine and uranyl oxo groups. Co4U3 and Co3U2_Cl contain six and five modes
within that region, respectively, that are related to NH3 twisting and the asymmetric stretch of the uranyl cation. It is
notable that there is a band within the IR spectra of Co3U2_Cl at 948 cm–1 that corresponds to the band at 950
cm–1 within the Raman spectrum; however, there is
no evidence of activation of the ν1 band within the
IR spectrum at 809 cm–1. This suggests that it is
not bond asymmetry driving the resulting spectral bands, but the interaction
between the hydrogen donor and the uranyl oxo acceptor.Comparing
these values to previous literature results is difficult
because the ν1 and ν3 bands reported
may not be assigned correctly. The uranyl symmetric stretching bands
for Cs4[UO2(CO3)3] and
Na4[UO2(CO3)3] possess
similar values to the CoU compounds, but other compounds
range from 815 to 831 cm–1 (Table ).[38,41,51,52] Similarly, the ν3 band has been reported with values ranging from 843 to 912 cm–1 for uranyl tricarbonate species. Colmenero et al.
performed DFT calculations to assess the infrared active modes of
the mineral Bayerite (Mg2[UO2(CO3)3] • 18 H2O) and found that the band
at 872 cm–1 could be assigned to a combination of
the uranyl antisymmetric stretching vibration and water rocking modes.[46] In addition, theoretical bands at 837 and 827
cm–1 are ascribed to ν3 stretching
vibrations, carbonate out of plane bending vibrations, and twisting
motions. Thus, even the presence of water within the tricarbonate
system can lead to difficulties in identifying the spectral modes
in these materials.Evidence of vibrational coupling or combination
modes, including
the uranyl O=U=O stretch, is not without precedent,
particularly with solids that contain strong intermolecular interactions.
Cahill and co-workers suggested a combination mode of anharmonic resonance
coupling between the benzoate ligands and the uranyl “yl”
stretch of their halogenated benzoic acid and uranyl crystalline materials.[66] In addition, Anderson and co-workers evaluated
the impact on interstitial water content within the schoepite mineral
phases (UO3•nH2O) on
the resulting spectral features.[67] Hydrogen
bonding effects were found to strongly influence the symmetric stretch
of each unique uranyl moiety enough to give rise to multiple stretching
modes in the Raman spectra within a relatively large spectral window
(810–880 cm–1). As noted earlier, Colmenero
et al. observed that multiple uranyl features in Bayerite are coupled
with water librations, water twists, and carbonate bending modes.[46]Because our systems display significant
differences in the vibrational
spectra, we considered many approaches in evaluating the signals.
When we base our vibrational analysis on the simple D analysis of the uranyl cation, this change
in the spectra could be related to lowering of the symmetry and inducing
activation. We can also consider coupled vibrational motions that
can occur with the specific hydrogen bonding networks in the material
as a source of the varied spectral signals. In a reductionist approach
to understand the real system, we can first evaluate the simpler models
and then build up the complexity to include the additional interactions,
DFT calculations are well suited for this approach, and in the next
section, we utilize this methodology to explore bond asymmetry without
additional structural contributions and in varied coordination environments
to evaluate the impacts on the vibrational modes. The first simplified
set of calculations is used to delineate the impact of uranyl bond
asymmetry on the vibrational features for a free uranyl cation and
then for a uranyl tricarbonate species. Following those studies, we
further add hydrogen bonding to the system to compare the influence
of these intermolecular interactions on the resulting spectral features.
DFT Analysis
Forced UO2 Bond Asymmetry
DFT calculations
are used to further evaluate the extent that uranyl bond asymmetry
can impact the position of the symmetric and asymmetric stretching
of the uranyl cation. To begin, we optimized the structure of a single
UO22+ cation in the absence of additional counterions.
This resulted in two equivalent U=O bond lengths of 1.76 Å
and ν1 and ν3 modes of 876 and 937
cm–1, respectively, which are within range of the
previously reported computational results for the uranyl cation.[68,69] We then varied the length of one U=O bond by 0.02 Å
increments from 1.66 to 1.86 Å and fixed the second U=O
bond to the optimized length of 1.76 Å. For each of the UO22+ structures described above, a set of single-point
energy calculations are performed in which the vibrational modes were
calculated. The calculated values for the resulting symmetric and
asymmetric stretching vibrations are listed in Table .
Table 4
DFT-Computed Vibrational Modes for
the UO22+ Unit, Where One U=O Bond Length
Is Systematically Increased by 0.02 Å from 1.66 to 1.86 Å,
While the Other Is Held Constant at 1.76 Åa
ΔU=O length (Å)
ν1 (cm–1)
ν3 (cm–1)
ν1/ν3
kF (mdyn/Å)
k12 (mdyn/Å)
–0.10
908
1177
1.30
9.64
–1.89
–0.08
906
1120
1.24
9.08
–1.34
–0.06
903
1066
1.18
8.56
–0.88
–0.04
900
1017
1.13
8.11
–0.48
–0.02
893
973
1.09
7.69
–0.17
0 (1.76 Å)
876
937
1.07
7.26
–0.03
+0.02
844
922
1.09
6.89
–0.17
+0.04
814
948
1.16
6.85
–0.61
+0.06
761
913
1.19
6.19
–0.73
+0.08
720
911
1.27
5.89
–1.00
+0.10
681
910
1.33
5.62
–1.25
Boldface is used to highlight the
structure where the U=O bond lengths are equal at 1.76 Å.
Boldface is used to highlight the
structure where the U=O bond lengths are equal at 1.76 Å.We compare how the computed vibrational modes change
as a function
of bond elongation and contraction, bringing the uranyl oxo atoms
closer together or further apart. When one U=O bond is elongated
by 0.10 Å, the change in the ν3 (+195 cm–1) is much greater than the change in the ν1 (+32 cm–1). For both vibrational modes,
there is an observed red shift. Alternatively, the contraction of
one U=O bond results in a more significant change in the ν1 (−195 cm–1) compared to the ν3 (−27 cm–1); both vibrational modes
exhibit a red shift as a result of asymmetric bond contraction. In
general, asymmetric bond elongation results in an increase in the
value of the vibrational frequencies, while bond contraction results
in a decrease in the value of the vibrational frequency. When the
U=O bond lengths are equivalent at 1.76 Å, the difference
between the ν1 and ν3 vibrational
frequencies is at a minimum. As the U=O bond length difference
increases, the difference between the ν1 and ν3 vibrational frequencies increases.The ν1/ν3 ratio
is reported and compared to previous results where it is used to evaluate
the impact of the interaction force constant within the uranyl bond.[19,20,38,70] Vibrational modes associated with the uranyl cation are also related
to the force constant (k1) and the interaction
force constant (k12). If we consider a
simple valence force field and assume harmonic vibrational for the
linear ion, then the interaction force constant can be omitted and
the relationship between ν1 and ν3 can be written as:where MO and MU represent the mass of
the O and U atoms, respectively. This leads to a ν3/ν1 of 1.065, which is identical to
that calculated for our symmetric uranyl bond (1.07). When the interaction
force constant is included, then the ν3/ν1 ratio will increase or decrease depending on
the overall sign of the k12. In the case
of our bond asymmetry, we note that ν3/ν1 increases, which indicates that the interaction
force constant decreases. This can be observed in the calculated k12 values, where more negative values are obtained
when one bond is either lengthened or shorted to induce asymmetry.
The trend is different for k1, where the value is dependent
on the length of the bond, with shorter distances related to stronger
force constants.Schnaars and Wilson evaluated force constants
for a series of uranyl
tetrachloride compounds, and these compare well to the results associated
with our computed uranyl cation.[71,72] At a symmetric
bond distance of 1.76 Å, the theoretical k1 was calculated at 7.26 mdyn/Å and decreased to 5.62
mdyn/Å with a bond elongation of 0.1 Å. This is well within
the range that has been experimentally observed within the tetrachloride
system (6.39–6.74 mdyn/Å).[73] Additionally, the k12 was observed between
−0.10 and −0.53 mdyn/Å, and this matches well with
a small negative value that was obtained from DFT analysis. It is
interesting to note that the ν3/ν1 ratio for the uranyl tetrachloride compounds ranges from 1.08 to
1.10, which is slightly higher than the value assumed for minimal
contribution of the k12 (1.065). This
suggests that the small contribution from the interaction force can
be observed by utilizing the vibrational band ratios.A similar
approach was followed for the [UO2(CO3)3]4– structure. The initial
coordinates were obtained from the experimental crystal structure.
The [UO2(CO3)3]4– was first subjected to geometry optimization, where the U=O
bonds optimized to equivalent lengths of 1.82 Å. Visualization
of the vibrational modes for the optimized [UO2(CO3)3]4– structure displayed two
ν1 modes at 789 (ν1a) and 717 (ν1b) cm–1 and a ν3 mode at
830 cm–1. The two ν1 modes display
coupling of the UO2 symmetric stretch and the ν2 wagging motion of the bound CO32– group. The ν1a band displays symmetric uranyl contraction
coupled to an inward ν2 CO2 wag, whereas
ν1b consists of a uranyl contraction coinciding with
an outward ν2 wag motion of the bound CO32– ligands.To investigate the effects of
U=O bond asymmetry on the
vibrational modes in [UO2(CO3)3]4–, a series of calculations at fixed geometry was carried
out. The interatomic separation of one of the U=O was varied
by 0.02 Å from 1.82 to 1.72 Å. We chose 1.82 Å as the
longest distance that is observed for the [UO2(CO3)3]4– with symmetric U=O bond
lengths. These calculations allow for the comparison of the change
in the vibrational modes with the presence of ligands in the equatorial
plane, but without the interaction of additional species.The
ν1 and ν3 vibrational frequencies
were monitored as the extent of the bond asymmetry increased along
the series (Table ). Comparing the ν1a and ν1b modes,
we observe an overall red shift of 9 or 11 cm–1,
respectively, when the U=O lengths differ by 0.1 Å. When
the asymmetric U=O bond contraction for the [UO2(CO3)3]4– complex differs
by 0.10 Å, there is a more significant red shift in the ν3 (+188 cm–1) than for the ν1 (+9 cm–1), which is similar to the free UO22+ system.We evaluated the ratio of the
symmetric and asymmetric bands to
provide further insight into the system (Table ). Inducing U=O bond asymmetry of
the uranyl tricarbonate complex does not change the ν1a/ν1b ratio, which remains constant at 1.10 throughout
the entire range of tested asymmetry values. Both the ν3/ν1a and ν3/ν1b ratios increase with increasing U=O bond asymmetry.
For ν3/ν1a, the ratio is similar
to the harmonic model (1.05) when the bonds are both at 1.82 Å
and increase to 1.26 when the bond difference is −0.1 Å.
For the ν3/ν1b ratio, it begins
with a larger value (1.16) because of a larger energy difference between
the modes and increases to 1.40 with induced asymmetry.
Table 5
DFT-Computed Vibrational Modes for
the [UO2(CO3)3]4– Unit, Where One U=O Bond Length Is Systematically Decreased
by 0.02 Å and the Other Is Held Constant at 1.82 Åa
ΔU=O length (Å)
ν1-a, ν1-b (cm–1)
Δν1
ν1-a/ν1-b
ν3 (cm–1)
ν3/ν1-a
ν3/ν1-b
–0.10
802, 726
76
1.10
1018
1.26
1.40
–0.08
801, 725
76
1.10
973
1.21
1.34
–0.06
800, 724
76
1.11
930
1.16
1.28
–0.04
803,
733
70
1.10
914
1.14
1.24
–0.02
795, 720
75
1.10
855
1.08
1.19
0 (1.82 Å)
789, 717
72
1.10
830
1.05
1.16
Boldface is used to highlight the
structure where the U=O bond lengths are equal at 1.82 Å.
Boldface is used to highlight the
structure where the U=O bond lengths are equal at 1.82 Å.
Counter-Cation Interactions
The next series of DFT
calculations were performed on systems that varied the position and
number of the [Co(NH3)6]3+ cation
around the uranyl carbonate complex. Isolated uranyl carbonate (UC)
was optimized, and then either one (UC1-A, UC1-B, or UC1-C) or two
(UC2-D and UC2-E) [Co(NH3)6]3+ cations
were placed around the uranyl tricarbonate anions in locations obtained
from the crystallographic information files (Figure ). The geometry of the isolated [UO2(CO3)3]4– complex (denoted
as UC) was optimized and included here for comparison to the models
that contained the cobalt hexamine counterion. As previously mentioned,
bond lengths in the isolated [UO2(CO3)3]4– molecular complex are symmetric, with U=O
bonds of 1.82 Å. Bonding to the carbonate anions leads to U–Oc equatorial distances of 2.45 Å and U–C interatomic
values of 2.91 Å. These theoretical bond distance values agree
well with other values observed by Reeder et al. and Ikeda et al.[74,75]Figure also depicts
the interactions between the [Co(NH3)6]3+ cation with asymmetric uranyl bonds. In UC1-A, the cobalt
hexamine interacts with the O atoms associated with the shorter U=O
bond (1.75 Å) with a D–H···A distance of
2.91 Å. Alternatively, UC-B shows the interaction of the [Co(NH3)6]3+ cation with the oxo group of the
longer U=O distance (1.80 Å) and D–H···A
distance of 3.51 Å. Geometry optimization of either UC1-A or
UC1-B results in the structure shown in UC1-C, where the cobalt hexamine
has moved from its position near the axial oxo groups to the equatorial
plane, where it can engage in H-bonding interactions with the carbonate
anions. The optimized structure has identical bond U=O bond
lengths (1.82 Å) to that observed for the isolated uranyl tricarbonate
anion. UC2-D and UC2-E depict the interaction between the uranyl tricarbonate
and two [Co(NH3)6]3+ cations at different
positions around the metal complex. In both cases, the uranyl bond
is modeled as asymmetric to further understand the impact of the intermolecular
H-bonding on the vibrational modes within these complexes. UC2-D is
modeled with the two cobalt hexamine cations engaged in interactions
with the longer U=O (1.80 Å), with D–H···A
distances of 3.63 Å. UC2-E is modeled with the one cobalt hexamine
cations engaged in interactions with each uranyl oxo, with D–H···A
distances of 3.63 Å to the longer U=O (1.80 Å) and
D–H···A of 2.91 Å to the shorter U=O
(1.75 Å).
Figure 4
Ball and stick representations of the molecular models
used in
the DFT calculations of UO2(CO3)34– interacting with [Co(NH3)6]3+ cations, where the number and position of the cation
are altered. Models UC1-A, -B, and -C contain one [Co(NH3)6]3+ cation, whereas UC2-D and -E contain
two counter cations. Uranium, oxygen, carbon, nitrogen, cobalt, and
hydrogen are depicted as yellow, red, gray, dark blue, light blue,
and white spheres, respectively.
Ball and stick representations of the molecular models
used in
the DFT calculations of UO2(CO3)34– interacting with [Co(NH3)6]3+ cations, where the number and position of the cation
are altered. Models UC1-A, -B, and -C contain one [Co(NH3)6]3+ cation, whereas UC2-D and -E contain
two counter cations. Uranium, oxygen, carbon, nitrogen, cobalt, and
hydrogen are depicted as yellow, red, gray, dark blue, light blue,
and white spheres, respectively.The symmetric and asymmetric uranyl stretching
modes were identified
in all three structures, and associated frequency values are reported
in Table . Only the
symmetric/asymmetric modes obtained from structures that exhibit atomic
displacements greater than 0.01 Å for the uranyl are reported
herein. As mentioned previously, the isolated [UO2(CO3)3]4– unit (UC) has two ν1 modes at 717 and 789 cm–1 and a ν3 mode at 830 cm–1, where the presence of
multiple ν1 modes is related to coupling between
the uranyl stretching modes and the carbonate motions. Each mode will
be described in detail for a given structure to show how the uranyl
modes shift as a function of counter cation position and number.
Table 6
DFT-Calculated Uranyl Active Vibrational
Modes for UC Structures Containing Cobalt Hexamine Cation(s) and an
Isolated Molecular Complex for Comparisona
structure
U=O lengths (Å)
ν1-a, ν1-b (cm–1)
Δν1
ν3 (cm–1)
ν1-a/ν1-b
ν3/ν1-a
ν3/ν1-b
isolated UC
1.82, 1.82
789, 717
72
830
1.10
1.05
1.15
isolated UC/asymmetric
1.82, 1.78
800, 724
76
930
1.11
1.16
1.28
UC1-A
1.80, 1.75(O···H)
861, 738
123
960
1.17
1.15
1.30
UC1-B
1.80(O···H), 1.75
868, 716
145
986
1.21
1.13
1.37
UC1-C
1.82, 1.82
803, 724
79
835
1.11
1.04
1.15
UC2-D
1.80(O···H),
1.75
871, 738
133
960
1.18
1.10
1.30
UC2-E
1.80(O···H),
1.75(O···H)
864, 736
128
961
1.17
1.11
1.30
Uranyl bond lengths engaged in a
H-bond are denoted with (O···H) following the value.
Uranyl bond lengths engaged in a
H-bond are denoted with (O···H) following the value.With the presence of hydrogen bonding, all ν1 and
ν3 uranyl symmetric stretching features are shifted
to higher wavenumbers compared to the isolated forms. The UC1-A interaction
geometry has ν1a and ν1b modes located
at 738 and 861 cm–1 and one major ν3 mode at 960 cm–1. With the presence of the [Co(NH3)6]3+ cation, additional concerted motions
are noted as the mode at 861 cm–1 shows coupling
between the uranyl stretching mode, inward ν2 CO32– wag, and the twisting of the cobalt hexamine
cation. Similarly, the band at 960 cm–1 exhibits
coupled uranyl and cobalt hexamine motions. Structure UC1-B indicates
that the ν1b mode is predicted to be at 716 cm–1 and ν1a band located at 868 cm–1 is coupled to the cobalt hexamine through hydrogen
bonding.Structure UC1-C has equivalent U=O bond lengths,
and the
vibrational modes can be compared to the [(UO2)(CO3)3]4– complex. Like the isolated
molecule, the symmetric ν1 modes in UC1-C occur at
724 and 803 cm–1. Both modes exhibit identical motions
of coupled uranyl ν1 and carbonate ν2 modes with minimal hydrogen-bonding contributions between the Oyl atoms and the cobalt hexamine that are now located along
the equatorial plane. The asymmetric ν3 uranyl mode
occurs at 835 cm–1 and contributions from the carbonate
ν3 mode.Comparatively, structures UC1-A and
UC1-B have more similar vibrational
modes to one another than to either structure UC1-C or the isolated
UC. These two structures share the same unequal uranyl axial bond
lengths (1.75 and 1.80 Å) and partake in hydrogen-bonding interactions
with the counter cation. Structures UC1-A and UC1-B have ν1 modes at 861 and 868 cm–1, respectively,
which are not present in the Isolated UC or Structure UC1-C. Alternatively,
both optimized geometries of structure UC1-C and the isolated UC model
have the same uranyl axial bond lengths (1.82 Å) and similar
vibrational modes. For example, both structure UC1-C and the isolated
UC models have a symmetric mode near or at 717 cm–1. Additionally, the isolated UC complex has an asymmetric ν3 mode at 830 cm–1, which resemble the mode
for structure UC1-C at 835 cm–1. The asymmetric
modes for structures UC1-A and UC1-B are blue-shifted to frequencies
greater than 960 cm–1 and are not present in the
830–850 cm–1 range.The ν1 modes vibrational modes for structures
UC2-D and E are analogous to the bands associated with the UC1-A.
Both the ν 1b modes (738 and 736 cm–1) can be linked to uranyl bond displacements coupled to carbonate
ν2 motions, with minor hydrogen breathing motions
from the cobalt hexamine cations. UC2-D has a second ν1 mode at 871 cm–1, which is blue-shifted relative
to the same band in UC2-E at 864 cm–1. Both structures
display ν3 modes at 960/961 cm–1, in which the uranyl oxo engages in hydrogen-bonding interactions
with cobalt hexamine groups.From the vibrational bands, we
can evaluate the impact of hydrogen
bonding on the ν1 and ν3 ratios.
Unlike the isolated system where the ν1a/ν1b ratio was constant at 1.10, the series including the cobalt
hexamine shows a range of higher values 1.17–1.21. This may
be caused by an inequivalent hydrogen bonding network that contributes
to the combination mode (oxo groups and carbonate anions), which impacts
these bands differently, manifesting in nonmonatomic changes in the
ratio. The ν3/ν1a and the ν3/ν1b ratios are larger than those observed
for the isolated system with symmetric U=O bonds, but these
values are within the region for isolated [UO2(CO3)]4– complexes with induced bond asymmetry. This
suggests that the impact of the hydrogen bonding network combined
with the asymmetry can lead to larger values for this ratio which
would need to be considered if using ratios to confirm vibrational
assignment of uranyl modes.
Comparison of Theoretical and Experimental Results
If we compare the DFT vibrational analysis to the spectroscopic measurements
of the CoU compounds, we find that we can utilize band
ratios to help confirm our spectral assignment. Previous combined
experimental studies with computational efforts found similar success
in assignments of challenging vibrational spectra.[76−78] The ν1-a/ν1-b ratios for all CoU
compounds were calculated to be 1.10–1.11, which is the same
as what is expected for a symmetric uranyl bond. There are multiple
concerted motions that contain the ν1-a or
ν3 bands, so determining the accurate ratio is not
straightforward. This speaks to the impact that the hydrogen bonding
network has on the asymmetric stretch (ν3). DFT calculations
demonstrated that hydrogen bonding between the uranyl oxo and a hydrogen
donor can cause a blue shift in the ν1 and ν3 uranyl stretching bands. We do not see evidence of this perturbation
for the symmetric ν1 stretching bands but do see
significant concerted motions of the NH3 and uranyl oxo
groups to create multiple ν3 asymmetric modes that
are shifted to higher wavenumbers, with respect to the isolated complex.
This demonstrates that the Raman spectra are less impacted by the
hydrogen bonding network than the infrared spectra in our system.
Conclusions
The uranyl tricarbonate anion was crystallized
with the cobalt
hexamine cation to form four different solid-state materials ([Co(NH3)6]4[UO2(CO3)3]3H2O11.67 (Co4U3), [Co(NH3)6]3[UO2(CO3)3]2Cl H2O7.5 (Co3U2_Cl), [Co(NH3)6]2[UO2(CO3)3]Cl2 (Co2U_Cl), and [Co(NH3)6]2[UO2(CO3)3]CO3 (Co2U_CO). Structural analysis of the compounds revealed no significant
perturbation of the uranyl bonds but displayed differences in the
hydrogen bonding network within these compounds. Raman and infrared
spectroscopy revealed different spectral features that were related
to combination modes associated with the hydrogen bonding networks.
DFT calculations were performed to evaluate the impacts of bond perturbation
compared to changes in the hydrogen bonding network. Overall, bond
perturbation led to an increased ν3/ν1 ratio, indicating that the interaction force constant (k12) should be considered for this system. Addition of
hydrogen bonding to the uranyl oxo groups led to a blue shift in the
vibrational features, and these interactions impact the ν3 band more significantly than the ν1.Understanding the complex spectral features related to hydrogen
bonding networks in solid and solution U(VI) phases will provide insights
into uranyl bond modification, improve our knowledge of uranyl speciation
in aqueous solutions, and enhance the use of these methodologies in
sensing and nuclear forensics capabilities. This study demonstrates
that combination bands within uranyl solids can lead to significant
complexity within the vibrational spectra and should be further evaluated
to provide a detailed understanding of these features. Additional
studies should also focus on providing relationships between spectral
bands that can be further utilized to identify specific U(VI) phases
and a more descriptive understanding of the interactions that take
place between the actinyl oxo groups and neighboring molecules and
ions.
Authors: Walter D Guerra; Emmanuel Odella; Maxim Secor; Joshua J Goings; María N Urrutia; Brian L Wadsworth; Miguel Gervaldo; Leónides E Sereno; Thomas A Moore; Gary F Moore; Sharon Hammes-Schiffer; Ana L Moore Journal: J Am Chem Soc Date: 2020-12-18 Impact factor: 15.419
Authors: Vitalii I Mishkevich; Mikhail S Grigoriev; Alexandre M Fedosseev; Philippe Moisy Journal: Acta Crystallogr Sect E Struct Rep Online Date: 2012-09-05