Literature DB >> 24188017

Hydrogen-bond networks: strengths of different types of hydrogen bonds and an alternative to the low barrier hydrogen-bond proposal.

Alireza Shokri1, Yanping Wang, George A O'Doherty, Xue-Bin Wang, Steven R Kass.   

Abstract

We report quantifying the strengths of different types of hydrogen bonds in hydrogen-bond networks (HBNs) via measurement of the adiabatic electron detachment energy of the conjugate base of a small covalent polyol model compound (i.e., (HOCH2CH2CH(OH)CH2)2CHOH) in the gas phase and the pKa of the corresponding acid in DMSO. The latter result reveals that the hydrogen bonds to the charged center and those that are one solvation shell further away (i.e., primary and secondary) provide 5.3 and 2.5 pKa units of stabilization per hydrogen bond in DMSO. Computations indicate that these energies increase to 8.4 and 3.9 pKa units in benzene and that the total stabilizations are 16 (DMSO) and 25 (benzene) pKa units. Calculations on a larger linear heptaol (i.e., (HOCH2CH2CH(OH)CH2CH(OH)CH2)2CHOH) reveal that the terminal hydroxyl groups each contribute 0.6 pKa units of stabilization in DMSO and 1.1 pKa units in benzene. All of these results taken together indicate that the presence of a charged center can provide a powerful energetic driving force for enzyme catalysis and conformational changes such as in protein folding due to multiple hydrogen bonds in a HBN.

Entities:  

Year:  2013        PMID: 24188017     DOI: 10.1021/ja408762r

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  7 in total

1.  Hydrogen bond design principles.

Authors:  Lucas J Karas; Chia-Hua Wu; Ranjita Das; Judy I-Chia Wu
Journal:  Wiley Interdiscip Rev Comput Mol Sci       Date:  2020-05-16

2.  Halogen bonding organocatalysis enhanced through intramolecular hydrogen bonds.

Authors:  Asia Marie S Riel; Daniel A Decato; Jiyu Sun; Orion B Berryman
Journal:  Chem Commun (Camb)       Date:  2022-01-27       Impact factor: 6.222

3.  Quantification of electrophilic activation by hydrogen-bonding organocatalysts.

Authors:  Ryan R Walvoord; Phuong N H Huynh; Marisa C Kozlowski
Journal:  J Am Chem Soc       Date:  2014-11-04       Impact factor: 15.419

4.  Strong Short-Range Cooperativity in Hydrogen-Bond Chains.

Authors:  Nicholas Dominelli-Whiteley; James J Brown; Kamila B Muchowska; Ioulia K Mati; Catherine Adam; Thomas A Hubbard; Alex Elmi; Alisdair J Brown; Ian A W Bell; Scott L Cockroft
Journal:  Angew Chem Int Ed Engl       Date:  2017-06-01       Impact factor: 15.336

5.  Investigations of the Cobalt Hexamine Uranyl Carbonate System: Understanding the Influence of Charge and Hydrogen Bonding on the Modification of Vibrational Modes in Uranyl Compounds.

Authors:  Mikaela Mary F Pyrch; Jennifer L Bjorklund; James M Williams; Maguire Kasperski; Sara E Mason; Tori Z Forbes
Journal:  Inorg Chem       Date:  2022-09-13       Impact factor: 5.436

Review 6.  Chiral Diol-Based Organocatalysts in Enantioselective Reactions.

Authors:  Truong N Nguyen; Po-An Chen; Krit Setthakarn; Jeremy A May
Journal:  Molecules       Date:  2018-09-11       Impact factor: 4.411

7.  Development of copper-catalyzed enantioselective decarboxylative aldolization for the preparation of perfluorinated 1,3,5-triols featuring supramolecular recognition properties.

Authors:  Céline Sperandio; Jean Rodriguez; Adrien Quintard
Journal:  Chem Sci       Date:  2019-12-27       Impact factor: 9.825

  7 in total

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