| Literature DB >> 36081060 |
Elodie Múrias Lopes1, Ricardo Rego2, Manuel Rito3, Clara Chamadoira3, Duarte Dias1, João Paulo Silva Cunha1.
Abstract
Deep brain stimulation of the Anterior Nucleus of the Thalamus (ANT-DBS) is an effective therapy in epilepsy. Poorer surgical outcomes are related to deviations of the lead from the ANT-target. The target identification relies on the visualization of anatomical structures by medical imaging, which presents some disadvantages. This study aims to research whether ANT-LFPs recorded with the PerceptTM PC neurostimulator can be an asset in the identification of the DBS-target. For this purpose, 17 features were extracted from LFPs recorded from a single patient, who stayed at an Epilepsy Monitoring Unit for a 5-day period. Features were then integrated into two machine learning (ML)-based methodologies, according to different LFP bipolar montages: Pass1 (nonadjacent channels) and Pass2 (adjacent channels). We obtained an accuracy of 76.6% for the Pass1-classifier and 83.33% for the Pass2-classifier in distinguishing locations completely inserted in the target and completely outside. Then, both classifiers were used to predict the target percentage of all combinations, and we found that contacts 3 (left hemisphere) and 2 and 3 (right hemisphere) presented higher signatures of the ANT-target, which agreed with the medical images. This result opens a new window of opportunity for the use of LFPs in the guidance of DBS target identification.Entities:
Keywords: ANT-DBS; LFPs; closed-loop stimulation; epilepsy; target localization
Mesh:
Year: 2022 PMID: 36081060 PMCID: PMC9460540 DOI: 10.3390/s22176601
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.847
Local field potential studies. Abbreviations: x—not applicable; STN—subthalamic nucleus; ACC—anterior cingulate cortex.
| Reference | Description | Neurostimulator | Anatomical Target | Number of Patients |
|---|---|---|---|---|
| Jimenz-Shahed et al. (2021) [ | Description of the sensing capabilities of the neurostimulator | Percept PC | x | x |
| Goyal et al. (2021) [ | Description of the sensing capabilities of the neurostimulator | Percept PC | x | x |
| Yang et al. (2020) [ | Study of which stimulation parameters provide pain relief without triggering after discharges | Activa PC+S | ACC | 3 |
| Passos et al. (2019) [ | Study the impact of dopaminergic state and movement of beta functional connectivity between basal ganglia and lower motor neurons | Activa PC+S | STN | 8 |
| Anidi et al. (2019) [ | Study whether STN-DBS affects beta burst dynamics and gait impairments differentially in freezers and non-freezers | Activa PC+S | STN | 12 |
| Hell et al. (2018) [ | Study of the STN function during gait | Activa PC+S | STN | 10 |
| Maling et al. (2018) [ | Development of a patient-specific computational framework to analyze LFP recordings | Activa PC+S | STN | 1 |
| Swann et al. (2018) [ | Study of the disfunction of disturbed neural networks in FLPs | Activa PC+S | STN | 5 |
| Neumann et al. (2017) [ | Study of long-term association of STN beta activity with parkinsonian motor signs | Activa PC+S | STN | 15 |
| Syrkin-Nikolau et al. (2017) [ | Study of STN neural features of freezers and non-freezers | Activa PC+S | STN | 14 |
| Blumenfeld et al. (2016) [ | Study whether the STN alpha/beta oscillation attenuation is causal to the bradykinesia improvement | Activa PC+S | STN | 9 |
| Quinn et al. (2015) [ | Study whether beta power is similar in different resting postures during forward walking | Activa PC+S | STN | 15 |
Figure 1DBS lead localization performed by the BrainLab Elements. Images above show the perspective where the electrodes have a higher level of contact with the brain structures.
Figure 2(A) Medtronic 3389 lead DBS model: each contact has a length of 1.5 mm, and the distance between two adjacent contacts is 0.5 mm; (B) LFP spatial locations of bipolar signals. Each spatial location corresponds to the midpoint between the considered channels.
Correspondence between bipolar LFP signal contacts, their spatial locations and the proportion of ANT target underlying each contact. Abbreviations—RH: right hemisphere; LH: left hemisphere; −: completely outside to the target; +: marginally in the target; ++: partially but not completely inserted in the target; +++: completely inserted in the target.
| Contacts | Physical Location | Montage | Target % (LH) | Target % (RH) |
|---|---|---|---|---|
| 0–1 | A | Pass2 | − | + |
| 0–2 | B | Pass1 | − | + |
| 1–2 | CPass2 | Pass2 | − | ++ |
| 0–3 | CPass1 | Pass1 | − | ++ |
| 1–3 | D | Pass1 | + | +++ |
| 2–3 | E | Pass2 | ++ | +++ |
Figure 3Schematic representation of the general methodology used.
List of extracted features.
| Feature Type | Feature | Description |
|---|---|---|
| Statistical | Variance (var) | Difference (spread) between the normalized squared sum of instantaneous values with the mean value |
| Skewness (skew) | Distortion or asymmetry of the probability density function of the amplitude of time-series | |
| Kurtosis (kurt) | Sharpness of the probability density function of the amplitude of time-series | |
| Median (md) | Value separating the higher half from the lower half of a data sample | |
| Spectral | Band power delta (bpd) | Power spectral density in the delta frequency band (1–3 Hz) |
| Band power theta (pbt) | Power spectral density in the theta frequency band (4–7 Hz) | |
| Band power alpha (pba) | Power spectral density in the alpha frequency band (8–12 Hz) | |
| Band power beta (bpb) | Power spectral density in the beta frequency band (13–30 Hz) | |
| Band power gamma (bpg) | Power spectral density in the gamma frequency band (3–100 Hz) | |
| Morphological | Absolute mean (am) | Absolute average value of a data sample |
| Mean peaks (mp) | Absolute average of the maximum values of a data sample | |
| Maximum (max) | Maximum value of a data sample | |
| Minimum (min) | Minimum value of a data sample | |
| Multivariate | Cross-correlation (crosscorr) | Measure of similarity of two time-series |
| Coherence (coh) | Measures the causal relationship between two signals | |
| Phase locking value (plv) | Measure of the phase synchrony between two time-series | |
| Phase lag index (pli) | Evaluates the phase difference distribution across observations |
Figure 4Ranking features results. Abbreviations—Spectral features: bpd (band power delta), bpt (band power theta), bpa (band power alpha), bpb (band power beta), bpg (band power gamma); Morphological features: am (absolute mean), mp (mean peaks), max (maximum), min (minimum); Multivariate features: crosscorr (cross-correlation), coh (coherence), plv (phase locking value), pli (phase lag index); Statistical features: var (variance), kurt (kurtosis), md (median), skew (skewness).
Classifiers and respective varying and standard model parameters.
| Classifier | Model Parameters | Standard |
|---|---|---|
| SVM | Kernel function: linear, radial, basis function (rbf), polynomial | rbf |
| kNN | Distance metrics: squared Euclidean (seuclidean), Euclidean, correlation, Spearman | seuclidean |
| NN | Hidden layer size (1:10) | 5 |
Prediction of the target-% of lead DBS physical locations.
| Model | Spatial Locations to Predict |
|---|---|
| Pass1 | CPass1-Left, CPass1-Right, BRight, DLeft, ALeft and ERight |
| Pass2 | CPass2-Left, CPass2-Right, ARight, ELeft, BLeft and DRight |
Pass1 and Pass2 classifiers ANT target percentage predictions. Pass1 classifier predicted ANT target percentages of Pass1 spatial locations (BRight, CPass1-Left and CPass1-Right and DLeft) and Pass2 spatial locations used as a Pass2 classifier class labels (ALeft and ERight); Pass2 classifier predicted ANT target percentages of Pass2 spatial locations (ARight, CPass2-Left and CPass2-Right and ELeft) and Pass1 spatial locations used as a Pass1-classifier class labels (BLeft and DRight). Gray cells indicate the predictions made by the opposite classifier. High prediction values for both hemispheres are written in bold. Abbreviations—LH: left hemisphere; RH: right hemisphere: completely outside the target; +: marginally in the target; ++: partially but not completely inserted in the target; +++: completely inserted in the target.
| Spatial Location | Target (LH) | Predictions (LH) | Target (RH) | Predictions (RH) |
|---|---|---|---|---|
| A | − | 54.35% | + | 50.00% |
| B | − | 63.04% | + | 56.52% |
| CPass1 | − | 41.30% | ++ | 52.17% |
| CPass2 | - | 52.17% | ++ | 54.35% |
| D | + | 40.87% | +++ |
|
| E | ++ |
| +++ |
|