Literature DB >> 36036588

Metagenome-Assembled Genomes of Bacteria Associated with Massospora cicadina Fungal Plugs from Infected Brood VIII Periodical Cicadas.

Cassandra L Ettinger1,2, Brian Lovett3, Matt T Kasson3, Jason E Stajich1,2.   

Abstract

We report six metagenome-assembled genomes (MAGs) associated with Massospora cicadina strain MCPNR19 (ARSEF 14555), an obligate entomopathogenic fungus of periodical cicadas. The MAGs include representatives of Pantoea, Pseudomonas, Lactococcus, and one potential new Chryseobacterium species. Future research is needed to resolve the ecology of these MAGs and determine whether they represent symbionts or contaminants.

Entities:  

Year:  2022        PMID： 36036588      PMCID： PMC9584288          DOI： 10.1128/mra.00413-22

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  21 in total

1.  Advances in the Evolution and Ecology of 13- and 17-Year Periodical Cicadas.

Authors:  Chris Simon; John R Cooley; Richard Karban; Teiji Sota
Journal:  Annu Rev Entomol       Date:  2021-10-08       Impact factor: 19.686

2.  An Improved 1.5-Gigabase Draft Assembly of Massospora cicadina (Zoopagomycota), an Obligate Fungal Parasite of 13- and 17-Year Cicadas.

Authors:  Jason E Stajich; Brian Lovett; Cassandra L Ettinger; Derreck A Carter-House; Tania Kurbessoian; Matt T Kasson
Journal:  Microbiol Resour Announc       Date:  2022-08-29

3.  The Sequence Alignment/Map format and SAMtools.

Authors:  Heng Li; Bob Handsaker; Alec Wysoker; Tim Fennell; Jue Ruan; Nils Homer; Gabor Marth; Goncalo Abecasis; Richard Durbin
Journal:  Bioinformatics       Date:  2009-06-08       Impact factor: 6.937

4.  Prodigal: prokaryotic gene recognition and translation initiation site identification.

Authors:  Doug Hyatt; Gwo-Liang Chen; Philip F Locascio; Miriam L Land; Frank W Larimer; Loren J Hauser
Journal:  BMC Bioinformatics       Date:  2010-03-08       Impact factor: 3.169

5.  Evolutionary relationships among Massospora spp. (Entomophthorales), obligate pathogens of cicadas.

Authors:  Angie M Macias; David M Geiser; Jason E Stajich; Piotr Łukasik; Claudio Veloso; DeAnna C Bublitz; Matthew C Berger; Greg R Boyce; Kathie Hodge; Matt T Kasson
Journal:  Mycologia       Date:  2020-05-15       Impact factor: 2.696

6.  CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.

Authors:  Donovan H Parks; Michael Imelfort; Connor T Skennerton; Philip Hugenholtz; Gene W Tyson
Journal:  Genome Res       Date:  2015-05-14       Impact factor: 9.043

7.  GToTree: a user-friendly workflow for phylogenomics.

Authors:  Michael D Lee
Journal:  Bioinformatics       Date:  2019-10-15       Impact factor: 6.937

8.  BlobToolKit - Interactive Quality Assessment of Genome Assemblies.

Authors:  Richard Challis; Edward Richards; Jeena Rajan; Guy Cochrane; Mark Blaxter
Journal:  G3 (Bethesda)       Date:  2020-04-09       Impact factor: 3.154

9.  Psychoactive plant- and mushroom-associated alkaloids from two behavior modifying cicada pathogens.

Authors:  Greg R Boyce; Emile Gluck-Thaler; Jason C Slot; Jason E Stajich; William J Davis; Tim Y James; John R Cooley; Daniel G Panaccione; Jørgen Eilenberg; Henrik H De Fine Licht; Angie M Macias; Matthew C Berger; Kristen L Wickert; Cameron M Stauder; Ellie J Spahr; Matthew D Maust; Amy M Metheny; Chris Simon; Gene Kritsky; Kathie T Hodge; Richard A Humber; Terry Gullion; Dylan P G Short; Teiya Kijimoto; Dan Mozgai; Nidia Arguedas; Matt T Kasson
Journal:  Fungal Ecol       Date:  2019-06-24       Impact factor: 3.404

10.  GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database.

Authors:  Pierre-Alain Chaumeil; Aaron J Mussig; Philip Hugenholtz; Donovan H Parks
Journal:  Bioinformatics       Date:  2019-11-15       Impact factor: 6.937
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  1 in total

1.  An Improved 1.5-Gigabase Draft Assembly of Massospora cicadina (Zoopagomycota), an Obligate Fungal Parasite of 13- and 17-Year Cicadas.

Authors:  Jason E Stajich; Brian Lovett; Cassandra L Ettinger; Derreck A Carter-House; Tania Kurbessoian; Matt T Kasson
Journal:  Microbiol Resour Announc       Date:  2022-08-29
  1 in total

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