| Literature DB >> 36016613 |
Jiaojiao Li1,2, Tianzhu Zhang3, Juanwei Ma1, Ningnannan Zhang3, Zhang Zhang3, Zhaoxiang Ye1.
Abstract
Objectives: This study aims to evaluate the diagnostic performance of machine-learning-based contrast-enhanced CT radiomic analysis for categorizing benign and malignant ovarian tumors.Entities:
Keywords: classification; computed tomography; machine learning; ovarian neoplasms; radiomics
Year: 2022 PMID: 36016613 PMCID: PMC9395674 DOI: 10.3389/fonc.2022.934735
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 5.738
Figure 1The patient selection workflow.
Histopathological characteristics of ovarian tumors included in the study.
| Variable | Patients of ovarian tumors ( |
|---|---|
| Benign | 719 (54.10%) |
| Malignant | 610 (45.90%) |
| Histological type of benign tumors: | |
| Serous cystoadenoma/cystoadenofibroma | 116 (16.13%) |
| Mucinous cystoadenoma | 110 (15.30%) |
| Teratoma | 198 (27.54%) |
| Fibroma/fibrothecoma | 105 (14.60%) |
| Endometriotic cyst/endometrioid tumor | 144 (20.03%) |
| Seromucinous cystadenoma | 13 (1.81%) |
| Brenner tumor | 1 (0.14%) |
| Other benign tumors | 32 (4.45%) |
| Histological type of malignant tumors: | |
| High grade serous ovarian cancer | 305 (50.00%) |
| Low grade serous ovarian cancer | 23 (3.77%) |
| Borderline tumor | 78 (12.79%) |
| Mucinous carcinoma | 18 (2.95%) |
| Endometrioid ovarian cancer | 60 (9.84%) |
| Clear cell ovarian cancer | 61 (10.00%) |
| Carcinosarcoma | 2 (0.33%) |
| Undifferentiated carcinoma | 1 (0.16%) |
| Ovarian metastases from other tumors | 25 (4.10%) |
| Granulosa cell ovarian tumor | 20 (3.28%) |
| Immature teratoma | 11 (1.80%) |
| Other malignant tumors | 6 (0.98%) |
Results are presented as N (%).
Patients characteristics.
| Characteristics | Training cohort ( | Validation cohort ( |
|
|---|---|---|---|
| Benign tumors, N (%) | 504 (54.19%) | 215 (53.88%) | – |
| Malignant tumors, N (%) | 426 (45.81%) | 184 (46.12%) | – |
| Age, median (IQR) | 51.00 (40.00,59.00) | 50.00 (41.00,59.00) | 0.701 |
| HE-4, median (IQR) | 58.90 (46.95,133.00) | 58.44 (45.39,138.78) | 0.761 |
| CA-125, median (IQR) | 51.48 (16.00,253.00) | 52.30 (17.53,258.05) | 0.561 |
| CT-reported margin, N (%) | |||
| Well defined | 624 (67.10%) | 261 (65.41%) | 0.552 |
| Ill defined | 306 (32.90%) | 138 (35.59%) | |
| CT-reported ascites, N (%) | |||
| Absent | 371 (39.89%) | 165 (41.35%) | 0.622 |
| Present | 559 (60.11%) | 234 (58.65%) | |
Results are presented as N (%).
IQR, interquartile range.
1Mann–Whitney U test.
2Chi-square test.
Results of univariate analysis and multivariate logistic regression analysis for clinical predictors in the training cohort.
| Clinical predictors | Univariate analysis | Multivariate regression analysis | |||
|---|---|---|---|---|---|
| Benign tumors | Malignant tumors |
| Odd ratio (95% CI) |
| |
| Age (IQR) | 47.00 (34.00–59.00) | 54.00 (47.00–60.00) | <0.00011 | 1.00 (0.99–1.02) | 0.8328 |
| HE-4 (IQR) | 49.55 (42.80–57.53) | 150.55 (69.96–372.00) | <0.00011 | 1.04 (1.03–1.05) | <0.0001 |
| CA-125 (IQR) | 19.98 (11.86–51.09) | 239.50 (68.50–715.00) | <0.00011 | 1.00 (1.00–1.00) | 0.4608 |
| Margin, N (%) | <0.00012 | 6.22 (3.92–9.86) | <0.0001 | ||
| Well defined | 461 (91.47%) | 163 (38.26%) | |||
| Ill defined | 43 (8.53%) | 263 (61.74%) | |||
| Ascites, N (%) | <0.00012 | 1.73 (1.15–2.59) | <0.0001 | ||
| Absent | 276 (54.76%) | 95 (22.30%) | |||
| Present | 228 (45.24%) | 331 (77.70%) | |||
Results are presented as N (%).
IQR interquartile range.
CI confidence interval.
1Mann–Whitney U test.
2chi-square test.
Figure 2Boxplot of ICCs of radiomic features extracted from nine feature groups. (A) Intra-observer ICCs. (B) Inter-observer ICCs. ICCs, intra-class correlation coefficients.
The RSD of classifiers for radiomics and mixed model in the training cohort.
| RSD | ||||||
|---|---|---|---|---|---|---|
| XGBoost | LR | RF | MLP | KNN | SVM | |
| Radiomics model | 1.64 | 1.98 | 1.75 | 1.21 | 1.92 | 1.32 |
| Mixed model | 1.51 | 0.75 | 0.95 | 0.53 | 1.28 | 0.64 |
RSD, relative standard deviation; XGBoost, eXtreme Gradient Boosting; LR, logistic regression; RF, random forest; MLP, multi-layer perceptron; KNN, k-nearest neighbor; SVM, support vector machines.
Figure 3The heatmap illustrating the predictive performance (AUC) for the six classifiers. AUC, area under the receiver-operating characteristic curve; R_model_train, radiomics model in the training cohort; M_model_train, mixed model in the training cohort; R_model_validation, radiomics model in the validation cohort; M_model_validation, mixed model in the validation cohort; XGBoost, eXtreme Gradient Boosting; LR, logistic regression; RF, random forest; MLP, multi-layer perceptron; KNN, k-nearest neighbor; SVM, support vector machines.
Diagnostic performances of the classifiers for radiomics and mixed model and the senior radiologist in the validation cohort.
| Classifiers/Models | AUC | ACC | Sens | Spec | PPV | NPV |
|---|---|---|---|---|---|---|
| XGBoost | ||||||
| Radiomics model | 0.91 | 0.82 | 0.79 | 0.84 | 0.83 | 0.81 |
| LR | ||||||
| Radiomics model | 0.91 | 0.82 | 0.84 | 0.81 | 0.85 | 0.79 |
| RF | ||||||
| Radiomics model | 0.90 | 0.82 | 0.83 | 0.81 | 0.85 | 0.79 |
| MLP | ||||||
| Radiomics model | 0.91 | 0.83 | 0.84 | 0.82 | 0.86 | 0.80 |
| KNN | ||||||
| Radiomics model | 0.88 | 0.82 | 0.73 | 0.90 | 0.80 | 0.86 |
| SVM | ||||||
| Radiomics model | 0.90 | 0.82 | 0.84 | 0.80 | 0.85 | 0.68 |
| Senior radiologist | 0.78 | 0.78 | 0.75 | 0.81 | 0.77 | 0.79 |
AUC, area under the receiver-operating characteristic curve; ACC, accuracy; Sens: sensitivity; Spec, specificity; PPV, positive predictive value; NPV, negative predictive value; XGBoost, eXtreme Gradient Boosting; LR, logistic regression; RF, random forest; MLP, multi-layer perceptron; KNN, k-nearest neighbor; SVM, support vector machines.
Figure 4Confusion matrix with MLP classifier in the validation cohort. (A) The radiomics model with MLP classifier. (B) The mixed model with MLP classifier. MLP, multi-layer perceptron.
Figure 5ROC curve of the optimal classifier (MLP). (A) The fivefold cross-validation ROC curve of radiomics model with MLP classifier in the training cohort. (B) The ROC curve of radiomics model with MLP classifier in the validation cohort. (C) The fivefold cross-validation ROC curve of mixed model with MLP classifier in the training cohort. (D) The ROC curve of mixed model with MLP classifier in the validation cohort. ROC, receiver-operating characteristic; MLP, multi-layer perceptron.