| Literature DB >> 36009685 |
Shogo Higaki1, Yoshitaka Matsui2, Yosuke Sasaki3, Keiko Takahashi4, Kazuyuki Honkawa5, Yoichiro Horii5, Tomoya Minamino5, Tomoko Suda1, Koji Yoshioka6.
Abstract
In this study, we developed calving prediction models for 24-h and 6-h periods before calving using data on physiological (tail skin temperature) and behavioral (activity intensity, lying time, posture change, and tail raising) parameters obtained using a multimodal tail-attached device (tail sensor). The efficiencies of the models were validated under tethering (tie-stall) and untethering (free-stall and individual pen) conditions. Data were collected from 33 and 30 pregnant cattle under tethering and untethering conditions, respectively, from approximately 15 days before the expected calving date. Based on pre-calving changes, 40 features (8 physiological and 32 behavioral) were extracted from the sensor data, and one non-sensor-based feature (days to the expected calving date) was added to develop models using a support vector machine. Cross-validation showed that calving within the next 24 h under tethering and untethering conditions was predicted with a sensitivity of 97% and 93% and precision of 80% and 76%, respectively, while calving within the next 6 h was predicted with a sensitivity of 91% and 90% and precision of 88% and 90%, respectively. Calving prediction models based on the tail sensor data with supervised machine learning have the potential to achieve effective calving prediction, irrespective of the cattle housing conditions.Entities:
Keywords: acceleration; cow; parturition prediction; skin temperature; support vector machine; wearable device
Year: 2022 PMID: 36009685 PMCID: PMC9405147 DOI: 10.3390/ani12162095
Source DB: PubMed Journal: Animals (Basel) ISSN: 2076-2615 Impact factor: 3.231
Figure 1External appearance and usage of the multimodal tail-attached device (tail sensor). (a) External appearance of a tail sensor designed for fitting the ventral tail base of cattle. The sensor was attached so that the stainless steel plate for temperature measurement (the silver round part) was on the animal side. X, Y, and Z denote the axes of the 3-axis accelerometer. Roll indicates the rotation of the X- and Z-axes about the Y-axis. The sensor dimensions are 21.0 mm × 26.0 mm × 9.7 mm, and the sensor weight with the battery is 5.8 g. (b) Tail sensor in an attachment. The sensor was inserted into a pocket formed in a silicone rubber belt (orange part) and sealed with a urethane gel sheet. (c) Position of the tail sensor. The silicone rubber belt with the sensor was attached to the ventral tail base using double-sided adhesive tape, and its position was stabilized using a hook-and-loop fastener. The orientations of the X-, Y-, and Z-axes were lateral, proximal/distal, and dorsal/ventral to the tail, respectively. The bars in (a,b) are 1 cm and 5 cm, respectively.
Description of features used to build the calving prediction models for predicting 24-h and 6-h periods before calving through supervised machine learning.
| Feature Description |
|---|
| Features derived from sensor data |
| Smoothened rST and ratios of activity intensity, lying time, and posture change |
| Minimum value during the last 12 h (6 h) * |
| Maximum value during the last 12 h (6 h) |
| Minimum value during the last 24 h (12 h) |
| Maximum value during the last 24 h (12 h) |
| Difference between the current value and minimum value during the last 12 h (6 h) |
| Difference between the current value and maximum value during the last 12 h (6 h) |
| Difference between the current value and minimum value during the last 24 h (12 h) |
| Difference between the current value and maximum value during the last 24 h (12 h) |
| Ratio of tail raising index |
| Minimum value during the last 6 h (3 h) |
| Maximum value during the last 6 h (3 h) |
| Minimum value during the last 12 h (6 h) |
| Maximum value during the last 12 h (6 h) |
| Difference between the current value and minimum value during the last 6 h (3 h) |
| Difference between the current value and maximum value during the last 6 h (3 h) |
| Difference between the current value and minimum value during the last 12 h (6 h) |
| Difference between the current value and maximum value during the last 12 h (6 h) |
| Feature derived from non-sensor-based data |
| Days to the expected calving date |
The residual tail skin temperature (rST) was calculated as the actual ST − mean ST for the same time on the previous three days. The rST data were smoothened using the exponentially weighted moving average and used for feature extraction. Ratios of activity intensity and lying time were calculated as the total value during the last 24 h/total value during the last 25–48 h. The ratio of posture change was calculated as the average number during the last 6 h/average number during the last 7–30 h. The ratio of tail raising index was calculated as the average value during the last 3 h/average value during the last 4–27 h. * Times in parentheses are used to extract the features for developing the 6-h prediction models.
Figure 2Changes in residual tail skin temperature (rST) and ratios of activity intensity, lying time, posture change, and tail raising index around calving. The rST was calculated as the actual ST − mean ST for the same time on the previous three days. The ratios of activity intensity and lying time were calculated as the total value during the last 24 h/total value during the last 25–48 h. The ratio of posture change was calculated as the average number during the last 6 h/average number during the last 7–30 h. The ratio of tail raising index was calculated as the average value during the last 3 h/average value during the last 4–27 h. Data were standardized to actual calving time (0 h: dashed vertical line). Inverted triangles indicate the time points with significant differences between the mean values at the indicated time points and the mean values during the reference period (−240 h to −121 h from calving) (p < 0.05). Data are expressed as the mean ± standard error (n = 33 and 30 in tethered and untethered cattle, respectively).
Performance of the calving prediction models for predicting 24-h and 6-h periods before calving under tethering and untethering conditions.
| Housing | Prediction | True | False | False | Sensitivity | Precision | Average Time Interval (h) 3 |
|---|---|---|---|---|---|---|---|
| Tethering | |||||||
| (n = 33) | 24 h | 32 | 1 | 8 | 97.0 | 80.0 | 13.7 ± 1.0 |
| 6 h | 30 | 3 | 4 | 90.9 | 88.2 | 2.7 ± 0.4 | |
| Untethering | |||||||
| (n = 30) | 24 h | 28 | 2 | 9 | 93.3 | 75.7 | 10.2 ± 1.5 |
| 6 h | 27 | 3 | 3 | 90.0 | 90.0 | 2.3 ± 0.3 | |
| Total | |||||||
| (n = 63) | 24 h | 60 | 3 | 17 | 95.2 | 77.9 | 12.0 ± 0.9 |
| 6 h | 57 | 6 | 7 | 90.5 | 89.1 | 2.5 ± 0.3 |
1 Sensitivity was calculated as true positive/(true positive + false negative). The values of the calving prediction models developed under tethering and untethering conditions were not significantly different under the corresponding prediction periods (p > 0.05, Fisher’s exact test). 2 Precision was calculated as true positive/(true positive + false positive). The values of the calving prediction models developed under tethering and untethering conditions were not significantly different under the corresponding prediction periods (p > 0.05, generalized score statistic). 3 Average time intervals (mean ± standard error) from true-positive calving alerts to actual calving. The values of the calving prediction models developed under tethering and untethering conditions were not significantly different under the corresponding prediction periods (p > 0.05, two-tailed Student’s t-test).
Figure 3Permutation feature importance for predicting 24-h and 6-h periods before calving under tethering and untethering housing conditions (15 most important features out of 41 features used). Classification error loss function (loss: ce) was used to calculate the relative importance of each feature. Black circles denote median importance, and the horizontal lines denote the 90%-quantile of importance values. Abbreviations indicate as follows: Days, days to the expected calving date; minXh, minimum value during the last X h (X = 3, 6, 12, or 24); maxXh, maximum value during the last X h; diffminXh, difference between the current value and minimum value during the last X h; diffmaxXh, difference between the current value and maximum value during the last X h; rST, residual skin temperature; rAct, ratio of activity intensity; rLying, ratio of lying time; rPost, ratio of posture change; rTail, ratio of tail raising index.