| Literature DB >> 35999222 |
Sai Ma1, Taicheng Huang2, Yukun Qu2, Xiayu Chen1, Yajie Zhang1, Zonglei Zhen3,4.
Abstract
The somatotopic representation of the body is a well-established organizational principle in the human brain. Classic invasive direct electrical stimulation for somatotopic mapping cannot be used to map the whole-body topographical representation of healthy individuals. Functional magnetic resonance imaging (fMRI) has become an indispensable tool for the noninvasive investigation of somatotopic organization of the human brain using voluntary movement tasks. Unfortunately, body movements during fMRI scanning often cause large head motion artifacts. Consequently, there remains a lack of publicly accessible fMRI datasets for whole-body somatotopic mapping. Here, we present public high-resolution fMRI data to map the somatotopic organization based on motor movements in a large cohort of healthy adults (N = 62). In contrast to previous studies that were mostly designed to distinguish few body representations, most body parts are considered, including toe, ankle, leg, finger, wrist, forearm, upper arm, jaw, lip, tongue, and eyes. Moreover, the fMRI data are denoised by combining spatial independent component analysis with manual identification to clean artifacts from head motion associated with body movements.Entities:
Mesh:
Year: 2022 PMID: 35999222 PMCID: PMC9399117 DOI: 10.1038/s41597-022-01644-4
Source DB: PubMed Journal: Sci Data ISSN: 2052-4463 Impact factor: 8.501
The experimental conditions and associated movement patterns for each condition (i.e., body part).
| Experimental conditions | Movement patterns for each condition |
|---|---|
| Toe movements | Flex and extend the toes from both feet. |
| Ankle movements | Dorsiflex and release both ankles. |
| Left leg movements | Lift and lower the left leg (maximum 10°) with the leg, ankle, and toes straight. |
| Right leg movements | Lift and lower the right leg (maximum 10°) with the leg, ankle, and toes straight. |
| Finger movements | Clench and loose both fists. |
| Wrist movements | Pitch and roll both wrists with clenched fists. |
| Forearm movements | Flex and release both forearms at the elbow (maximum 20°) with the wrists and fingers straight. |
| Upper arm movements | Lift and lower the upper arms (maximum 20°) with the upper arms, forearms, wrist, and fingers straight. |
| Jaw movements | Bite or twist jaws. |
| Lip movements | Expand and contract the lips with the teeth being bitten and tongue still. |
| Tongue movements | Circular tongue with the teeth being bitten and lips closed. |
| Eye movements | Blink or saccade eyes. |
| Rest | Fixate on the dot presented in the center of the screen. |
Fig. 1The blocked-design body movement task for mapping the topographical representations of human body. (a) The 12 body parts (i.e., conditions) were grouped into two sets to make the adjacent body parts into different groups as possible. (b) Each set was repeated twice in a run. The order of the set was counterbalanced, and the order of six movement conditions within each set was randomized.
Spatial, temporal, and power characteristics of different categories of ICs.
| Category | Spatial map | Time series | Power spectrum |
|---|---|---|---|
| Signal | Small number of contiguous clusters of voxels in gray matter | Correlated with some movement conditions | Predominantly in low frequencies (<0.1 Hz) |
| Head motion | Ring-like shape or stripes around the edge of the brain | Sudden jumps or gradual drifts (correlated with realignment parameters) | Broadband, but dominated by low-frequency content |
| Susceptibility motion | Areas near air cavities or blood vessels | Sudden jumps and correlated with realignment parameters | Predominantly in low frequencies (<0.1 Hz) |
| Non-brain | Eyeball, tongue, and throat | Regular oscillatory patterns | Predominantly in low frequencies (<0.1 Hz) |
| Cardiac | Contiguous clusters of voxels overlapped with the known anatomical structures | Regular oscillatory patterns, no sudden jumps or gradual change | Usually dominated by high frequencies (>0.1 Hz), sometimes aliased into low frequencies (<0.1 Hz) |
| Respiratory | |||
| Sagittal sinus | |||
| White matter | |||
| MRI related | Abrupt intensity changes in slice direction | Sudden jumps and/or oscillation patterns | Predominantly in high frequencies (>0.1 Hz) |
| Unclassified noise | Mixture of multiple types of artifacts | Sudden jumps and/or oscillation patterns | Broadband |
| Unknown signal | Usually a mixture of signal and noise, hard to be identified as signal or noise unambiguously. | ||
Fig. 2The coverage probabilistic map provided a voxelwise description for the brain coverage, indicating all brain structures were covered in each individual.
Fig. 3The distribution of head motion magnitude measured by framewise displacement (FD). (a) The histogram of FD calculated from all runs and participants. The long tail of the distribution indicates that instantaneous head motion is small. (b) The histogram of FD for different movement conditions displayed as violin plots.
Fig. 4The functional magnetic resonance imaging (fMRI) data showed high temporal signal-to-noise ratio (tSNR) within somatotopic cortices. The tSNR was calculated for each vertex within the somatotopic region of interest on the fsLR surface and averaged across all runs and participants. (a) The tSNR map for the preprocessed fMRI data before independent component analysis (ICA)-based denoising. (b) Cohen’s d effect size of the tSNR improvement. Cohen’s d was calculated by dividing the mean difference by the standard deviation of the difference between the tSNR from the fMRI data before and after ICA-based denoising. (c) Left: The group-averaged representational dissimilarity matrix for the 12 body movement conditions, calculated from the data before (lower triangular part) and after (upper triangular part) ICA-based denoising. Right: The scatterplot of the mean representational dissimilarities (MRD) across all pairs of conditions calculated on each individual. Almost all of the participants show improved representational dissimilarities after the data were denoised.
Fig. 5The activation maps from two example contrasts. The group-level analysis was performed for two contrasts of interest using a one-sample t-test with the beta images from all participants as inputs. The analysis was constrained within the primary somatotopic region. To reveal the continuous changes of topographical activations within the region, no threshold was used in displaying the activation maps. (a) Group-level z-statistical parametric maps for the contrast fingers vs. tongue. Red indicates fingers > tongue, whereas green indicates tongue > fingers. (b) Group-level z-statistical parametric maps for the contrast fingers vs. wrists. Red indicates fingers > wrists, whereas green indicates wrists > fingers.
| Measurement(s) | Functional brain measurement |
| Technology Type(s) | Blood Oxygen Level-Dependent Functional MRI |
| Factor Type(s) | Motor movements |
| Sample Characteristic - Organism | Homo sapiens |
| Sample Characteristic - Environment | Anthropogenic environment |
| Sample Characteristic - Location | China |