| Literature DB >> 35985159 |
Shahenda Mahgoub1, Samar S Fatahala2, Amira I Sayed3, Hanaa B Atya4, Mohamed F El-Shehry5, Hala Afifi6, Samir M Awad3, Rania H Abd El-Hameed3, Heba Taha4.
Abstract
DPP-4Is are well recognized therapy for type 2 diabetes. In spite of sharing a common mode of action, the chemical diversity among members of DPP-4Is raised the question whether structural differences may result in distinguished activities. DPP-4Is were recently explored as drug repurposing means for treatment of SARS-CoV-2 due to the urgent need for small molecule drugs for controlling infections. The use of DPP-4Is was not correlated with adverse COVID-19-related consequences among patients with type 2 diabetes. Inspired by these reasons and the importance of pyrimidinone ring as DPP-4I with both antioxidant and anti-inflammatory activities, we succeeded to prepare some novel pyrimidinone and thio-pyrimidinone derivatives, which were then screened for their antidiabetic activity and DPP-4 inhibition. In addition, their anti-inflammatory effect on LPS-stimulated RAW 264.7 cells were evaluated. Furthermore, their antioxidant activities were also tested.Entities:
Keywords: CRP; Co-receptor; DPPH; IL-6; Molecular Docking; OGT; Pyrimidinones
Mesh:
Substances:
Year: 2022 PMID: 35985159 PMCID: PMC9364673 DOI: 10.1016/j.bioorg.2022.106092
Source DB: PubMed Journal: Bioorg Chem ISSN: 0045-2068 Impact factor: 5.307
Fig. 1Approved DPP-4Is classified according to the main structures.
Fig. 2Schematic representation for DPP-4/Substrate complex.
Fig. 3Naturally occurring phenolic compounds having DPP-4 inhibition potent activity.
Fig. 4Aim of our work.
Scheme 1Preparation of compounds (1–8).
Screening the effect of various compounds oral administration on blood glucose levels in normal rats during an OGTT.
| Compound | AUC (mg.min/dl) | % Reduction in BGL compared to control |
|---|---|---|
| 3a | 194.50 ± 23.83 | NA |
| 3b | 242.50 ± 17.60 | NA |
| 3c | 226.96 ± 15.08 | NA |
| 3d | 215.95 ± 14.32 | NA |
| 4a | 236.00 ± 21.56 | NA |
| 4b | 173.71 ± 11.61 *** | 22.75 |
| 4c | 168.00 ± 29.14 *** | 25.29 |
| 4d | 181.50 ± 9.71 ** | 19.90 |
| 5a | 176.04 ± 14.50 *** | 21.58 |
| 5b | 189.14 ± 14.87 * | 15.89 |
| 5c | 181.75 ± 13.24 ** | 19.97 |
| 5d | 193.83 ± 14.46 | NA |
| 6a | 185.08 ± 20.62* | 17.70 |
| 6b | 182.75 ± 13.43** | 18.73 |
| 6c | 185.83 ± 8.16* | 17.36 |
| 6d | 195.67 ± 19.52 | NA |
| 7a | 185.42 ± 19.64* | 17.55 |
| 7b | 191.79 ± 13.77 | NA |
| 7c | 186.17 ± 8.62* | 17.21 |
| 7d | 186.29 ± 17.82* | 17.16 |
| 8a | 186.92 ± 16.21* | 16.88 |
| 8b | 182.00 ± 13.52** | 19.07 |
| 8c | 178.04 ± 14.15*** | 20.83 |
| 8d | 221.63 ± 9.18 | NA |
| Diamicron | 189.21 ± 10.45* | 15.86 |
Data is presented as mean AUC ± SD. * Significant (P < 0.05), ** (P < 0.01) or *** (P < 0.001) compared to control group. NA: Not active. N = 6. OGTT: oral glucose tolerance test.
In vitro DPP-4 inhibitory activities of the selected test compounds.
| Compound | DPP-4 IC50 (µM) |
|---|---|
| 4b | 0.063 ± 0.003 |
| 4c | 0.418 ± 0.020 |
| 4d | 1.324 ± 0.065 |
| 5a | 0.577 ± 0.028 |
| 5b | 0.634 ± 0.031 |
| 5c | 0.290 ± 0.018 |
| 6a | 0.047 ± 0.002 |
| 6b | 0.071 ± 0.004 |
| 6c | 0.264 ± 0.013 |
| 7a | 0.153 ± 0.008 |
| 7c | 0.277 ± 0.014 |
| 7d | 0.057 ± 0.003 |
| 8a | 0.104 ± 0.005 |
| 8b | 0.075 ± 0.003 |
| 8c | 0.468 ± 0.023 |
| Linagliptin | 0.023 ± 0.001 |
Data is displayed as mean ± SD.
Screening the effect of active compounds on BGLs during an OGTT in type2 diabetic rats.
| Compound | AUC (mg.min/dl) | % Reduction in BGL compared to control |
|---|---|---|
| 496.33 ± 40.87*** | 36.59 | |
| NA | NA | |
| NA | NA | |
| NA | NA | |
| NA | NA | |
| 600.80 ± 71.47*** | 23.24 | |
| 461.79 ± 35.63*** | 41.00 | |
| NA | NA | |
| NA | NA | |
| NA | NA | |
| NA | NA | |
| 509.29 ± 54.66*** | 34.94 | |
| NA | NA | |
| 595.38 ± 50.23*** | 23.94 | |
| NA | NA | |
| 497.65 ± 55.15*** | 36.42 |
Data is presented as mean AUC ± SD. * Significant (P < 0.05), ** (P < 0.01) or *** (P < 0.001) compared to control group. OGTT: oral glucose tolerance test, NA: Not active. (N = 6).
Fig. 5Values are mean ± SD (n = 3). ***significant (P < 0.001) compared to control diabetic group.
Effect of the selected compounds against RAW264.7 cells viability.
| Compound | IC50 (µM) |
|---|---|
| 4b | 241.30 ± 69.20 |
| 6a | 175.20 ± 24.70 |
| 6b | 188.90 ± 26.00 |
| 7d | 101.60 ± 16.60 |
| 8b | 154.60 ± 24.20 |
Data is displayed as mean ± SD.
Fig. 6The effect of selected compounds on . Cells were treated with LPS (1 µg/mL). mRNA expression data are presented as mean ± SD fold changes of three assays referenced to Actb. ***: Significant (p < 0.001) compared to the mRNA levels of the LPS control group. Actb: β-actin; the housekeeping gene.
Fig. 7Effect of the selected compounds on the release of CRP and IL-6 by LPS (1 μg/mL) stimulated RAW264.7 macrophages. Data are presented as mean ± SD of three assays. ***: Significant (p < 0.001) compared to LPS.
Antioxidant activity of the most active compounds using the DPPH scavenging method.
| Compound | IC50 (µM) |
|---|---|
| 65.93 ± 3.4 | |
| 138.71 ± 7.1 | |
| 123.02 ± 6.3 | |
| 155.14 ± 7.9 | |
| 60.79 ± 3.1 | |
| 55.18 ± 2.8 |
Data is displayed as mean ± SD.
Fig. 8% Radical scavenging activity of the test compounds in DPPH assay.
Results of molecular docking of the most active compounds* versus DPP-4 (PDB ID: 2RGU).
| Compound | (S) Kcal/mol | E score1 Kcal/mol | E score 2 Kcal/mol | Binding interaction (Receptor-Ligand) |
|---|---|---|---|---|
| 4b | −6.1787 | −10.9107 | −6.1787 | Glu206-(Thiazole) (H-b, 4.10 Ao), |
| 4c | −5.4205 | −11.5807 | −5.4205 | Tyr547-(*NH-C |
| 6a | −6.9885 | −11.3901 | −6.9885 | Glu205-(*NH-NH2) (H-b, 3.40 Ao), |
| 6b | −6.2857 | −11.1729 | −6.2857 | Glu206-(*NH-NH2) (H-b, 3.03 Ao), |
| 7d | −5.6598 | −10.6269 | −5.6598 | Glu205-(NH-Phenyl) (H-b, 3.08 Ao), |
| 8b | −6.7936 | −11.2189 | −6.7936 | Tyr631-(Pyrimidine) (H-π, 4.70 Ao), |
| Linagliptin | −6.0368 | −11.3452 | −6.0368 | Glu205-(NH3+) (H-b, 2.85 Ao), |
| The most active compounds* (4b, 4c, 6a, 6b, 7d, and 8b) | ||||
Fig. 92D binding modes of compounds (4b, 4c, 6a, 6b, 7d, 8b) and Linagliptin with DPP-4 active site.
Fig. 103D binding mode of compound 6a with DPP-4 active site.
Fig. 11SAR for the uppermost active compounds.
Primers for mRNA.
| Gene | Primers | Sequence |
|---|---|---|
| Forward | ||
| Reverse | ||
| Forward | ||
| Reverse | ||
| Forward | ||
| Reverse | ||