Literature DB >> 35974909

Diagnosis of Neisseria Gonorrhoeae by Loop-Mediated Isothermal Amplification: Systematic Review and Meta-Analysis.

Qian Zhou1, Ruixing Yu2, Deju Xia1, Jingwei Liu1, Wenqi Xu1, Yueping Yin1.   

Abstract

Neisseria gonorrhoeae (gonococci) is the pathogen of gonorrhea. At present, there is no robust statistical analysis targeting the detection accuracy for N.gonorrhoeae of loop-mediated isothermal amplification (LAMP). We performed a full search of five databases for studies using the LAMP method to detect N.gonorrhoeae in this study. Nine datasets derived from eight studies satisfying the inclusion requirement were collected for this study. The pooled sensitivity rate and specificity were calculated as 98.53 and 99.49%. The pooled positive likelihood ratio (PLR), negative likelihood ratio (NLR) and diagnostic odds ratio (DOR) were 66.0, 0.04 and 1863.8. After plotting the summary receiver operating characteristic (sROC), the area under the curve (AUC) and Q* index was calculated as 0.99 and 0.9774. Subgroup analyses based on the type of samples, location, and gold standard did not find sources of significant heterogeneity. In conclusion, the LAMP method could be an effective and convenient method with high accuracy for the clinical detection of N.gonorrhoeae. Moreover, the confirmation of this finding needs more high-quality studies with regional data and large samples. © Association of Microbiologists of India 2022.

Entities:  

Keywords:  Detection method; Loop-mediated isothermal amplification; Meta-analysis; Neisseria gonorrhoeae

Year:  2022        PMID: 35974909      PMCID: PMC9375793          DOI: 10.1007/s12088-022-01013-0

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN: 0046-8991


  16 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Rapid ultrasonic isothermal amplification of DNA with multiplexed melting analysis – applications in the clinical diagnosis of sexually transmitted diseases.

Authors:  Gaolian Xu; Rory N Gunson; Jonathan M Cooper; Julien Reboud
Journal:  Chem Commun (Camb)       Date:  2015-02-14       Impact factor: 6.222

3.  Colorimetric-Luminance Readout for Quantitative Analysis of Fluorescence Signals with a Smartphone CMOS Sensor.

Authors:  Aashish Priye; Cameron S Ball; Robert J Meagher
Journal:  Anal Chem       Date:  2018-10-16       Impact factor: 6.986

4.  Multiplex real-time PCR assays for the prediction of cephalosporin, ciprofloxacin and azithromycin antimicrobial susceptibility of positive Neisseria gonorrhoeae nucleic acid amplification test samples.

Authors:  S W Peterson; I Martin; W Demczuk; N Barairo; P Naidu; B Lefebvre; V Allen; L Hoang; T F Hatchette; D Alexander; K Tomas; M Trubnikov; T Wong; M R Mulvey
Journal:  J Antimicrob Chemother       Date:  2020-12-01       Impact factor: 5.790

Review 5.  Gonorrhoea.

Authors:  Magnus Unemo; H Steven Seifert; Edward W Hook; Sarah Hawkes; Francis Ndowa; Jo-Anne R Dillon
Journal:  Nat Rev Dis Primers       Date:  2019-11-21       Impact factor: 52.329

6.  A Loop-Mediated Isothermal Amplification Assay Targeting Neisseria gonorrhoeae penA-60.001.

Authors:  Ken Shimuta; Shu-Ichi Nakayama; Hideyuki Takahashi; Makoto Ohnishi
Journal:  Antimicrob Agents Chemother       Date:  2019-12-20       Impact factor: 5.191

7.  Loop-mediated isothermal amplification of Neisseria gonorrhoeae porA pseudogene: a rapid and reliable method to detect gonorrhea.

Authors:  Mei-Ling Liu; Yong Xia; Xing-Zhong Wu; Jian-Qiong Huang; Xu-Guang Guo
Journal:  AMB Express       Date:  2017-02-23       Impact factor: 3.298

Review 8.  Loop-mediated isothermal amplification (LAMP): a versatile technique for detection of micro-organisms.

Authors:  Y-P Wong; S Othman; Y-L Lau; S Radu; H-Y Chee
Journal:  J Appl Microbiol       Date:  2018-02-12       Impact factor: 3.772

9.  The PRISMA 2020 statement: an updated guideline for reporting systematic reviews.

Authors:  Matthew J Page; Joanne E McKenzie; Patrick M Bossuyt; Isabelle Boutron; Tammy C Hoffmann; Cynthia D Mulrow; Larissa Shamseer; Jennifer M Tetzlaff; Elie A Akl; Sue E Brennan; Roger Chou; Julie Glanville; Jeremy M Grimshaw; Asbjørn Hróbjartsson; Manoj M Lalu; Tianjing Li; Elizabeth W Loder; Evan Mayo-Wilson; Steve McDonald; Luke A McGuinness; Lesley A Stewart; James Thomas; Andrea C Tricco; Vivian A Welch; Penny Whiting; David Moher
Journal:  Syst Rev       Date:  2021-03-29

10.  Visual and Rapid Diagnosis of Neisseria gonorrhoeae Using Loop-Mediated Isothermal Amplification Combined With a Polymer Nanoparticle-Based Biosensor in Clinical Application.

Authors:  Xu Chen; Qingxue Zhou; Xueli Wu; Shuoshi Wang; Rui Liu; Shilei Dong; Wei Yuan
Journal:  Front Mol Biosci       Date:  2021-07-21
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.