Literature DB >> 35974819

Crystal structure and Hirshfeld surface analysis of ethyl (3E)-5-(4-chloro-phen-yl)-3-{[(4-chloro-phen-yl)formamido]-imino}-7-methyl-2H,3H,5H-[1,3]thia-zolo[3,2-a]pyrimidine-6-carboxyl-ate.

Shaaban K Mohamed1,2, Joel T Mague3, Mehmet Akkurt4, Abdallah M Alfayomy5, Sahar M Abou Seri6, Shaban A A Abdel-Raheem7, Mokhtar A Abd Ul-Malik8.   

Abstract

In the title mol-ecule, C23H20Cl2N4O3S, the thia-zole ring is planar while the pyrimidine unit fused to it adopts a screw-boat conformation. In the crystal, thick sheets parallel to the bc plane are formed by N-H⋯N, C-H⋯N and C-H⋯O hydrogen bonds together with π-π inter-actions between the formamido carbonyl groups and the thia-zole rings. Hirshfeld surface analysis indicates that the most important contributions to the crystal packing are from H⋯H (30.9%), Cl⋯H/H⋯Cl (20.7%), C⋯H/H⋯C (16.8%) and O⋯H/H⋯O (11.4%) inter-actions. © Mohamed et al. 2022.

Entities:  

Keywords:  Hirshfeld surface analysis; crystal structure; hydrogen bond; pyrimidine; thia­zole

Year:  2022        PMID: 35974819      PMCID: PMC9361367          DOI: 10.1107/S205698902200603X

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Several compounds bearing 1,3,4-oxa­diazole have been reported to exhibit significant anti­cancer activities (Yadagiri et al., 2015 ▸; Valente et al., 2014 ▸; El-Din et al., 2015 ▸). On the other hand, pyrimidine-based compounds have shown significant activity against cancer and tumor cells (Tolba et al., 2022 ▸). Compounds combining the pharmacophores di­hydro­pyrimidine and 1,3,4-oxa­diazole have been prepared with the aim of developing potent anti­cancer agents (Ragab et al., 2017 ▸). The target hybrids have been synthesized through condensation of 6-methyl-4-aryl-1,2,3,4-tetra­hydro­pyrimidine-2(1H)-thione derivatives and 2-(chloro­meth­yl)-5-aryl-1,3,4-oxa­diazole derivatives and screened for their in vitro cytotoxic activity against 60 cancer cell lines according to NCI (USA) protocols (Skehan et al., 1990 ▸). Unexpectedly, an intra­molecular cyclization and ring opening of 1,3,4-oxa­diazole has occurred and the title compound was chosen as an example of this series for further structural elucidation through X-ray crystallography.

Structural commentary

In the title compound, (Fig. 1 ▸), the thia­zole ring is planar (r.m.s. deviation of the fitted atoms = 0.001 Å) and the C11–C16 and C18–C23 benzene rings are inclined to it by 88.95 (8) and 11.47 (7)°, respectively. The pyrimidine ring (C1/C2/C3/N1/C4/N2) exhibits a screw-boat conformation with puckering parameters (Cremer & Pople, 1975 ▸) of Q(2) = 0.2383 (15) Å and φ(2) = 188.4 (4)°. This ring is folded about the C1⋯N1 axis by 19.9 (1)°. The torsion angles about the bonds of the N′-methyl­ideneformohydrazide link between the chloro­phenyl ring and the 2,3-di­hydro-5H-[1,3]thia­zolo[3,2-a]pyrimidine ring system are: N2—C6=N3—N4 = −177.82 (12)°, C6=N3—N4—C17 = −171.54 (13)° and N3—N4—C17—C18 = −175.14 (12)°. The stereochemistry about the imine function C6=N3 is E.
Figure 1

The title mol­ecule with the labelling scheme and 50% probability ellipsoids.

Supra­molecular features and Hirshfeld surface analysis

In the crystal, a combination of N4—H4⋯N1 and C5—H5B⋯N1 hydrogen bonds (Table 1 ▸) form helical chains extending along the b-axis direction (Fig. 2 ▸). The chains are connected by C5—H5A⋯O3, C15—H15⋯O3 and C8—H8B⋯Cl1 hydrogen bonds as well as centrosymmetrically related π-inter­actions between the C17=O3 carbonyl groups and the thia­zole rings [O3⋯Cg1i = 3.0299 (14) Å, C17⋯Cg1i = 3.4656 (16) Å, C17=O3⋯Cg1i = 100.48 (10)°; Table 2 ▸ and Fig. 3 ▸; Cg1 is the centroid of the thia­zole ring, symmetry code: (i) 1 − x, 1 − y, 1 − z] into thick layers parallel to the bc plane (Fig. 4 ▸).
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N4—H4⋯N1i 0.89 (2)2.16 (2)3.0076 (18)158 (2)
C5—H5A⋯O3ii 0.98 (2)2.533 (19)3.081 (2)115.3 (14)
C5—H5B⋯N1i 0.98 (2)2.57 (2)3.453 (2)150.1 (16)
C8—H8B⋯Cl1iii 1.02 (2)2.77 (2)3.4430 (17)123.1 (14)
C15—H15⋯O3iv 0.95 (2)2.54 (2)3.1682 (19)124.5 (17)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

Figure 2

A portion of the hydrogen-bonded chain viewed along the c-axis direction. N—H⋯N and C—H⋯N hydrogen bonds are shown. H atoms not involved in these inter­actions have been omitted for clarity.

Table 2

Summary of short inter­atomic contacts (Å) in the title compound

ContactDistanceSymmetry operation
Cl1⋯H10B 2.96 x, −1 + y, z
H4⋯N12.161 − x, −  + y,  − z
H15⋯O32.54 x,  − y,  + z
H13⋯Cl22.911 − x, −y, 1 − z
H5A⋯O32.531 − x, 1 − y, 1 − z
H20⋯H9B 2.531 + x,  − y,  + z
H9A⋯H9A 2.43x, 1 − y, 1 − z
Figure 3

Detail of the C—H⋯O and C—H⋯Cl hydrogen bonds and the π-inter­actions down the b-axis. H atoms not involved in these inter­actions have been omitted for clarity.

Figure 4

Packing viewed along the a-axis direction with inter­molecular inter­actions shown as in Fig. 2 ▸.

A Hirshfeld surface analysis was performed using Crystal Explorer 17.5 (Turner et al., 2017 ▸) to visualize the inter­molecular inter­actions. The Hirshfeld surface mapped over d norm (Fig. 5 ▸) shows the expected bright-red spots near atoms N1, O3, H5A, H5B and H15 involved in the C—H⋯O and C—H⋯N hydrogen-bonding inter­actions (Table 1 ▸) and short contacts (Table 2 ▸). Analysis of the two-dimensional fingerprint plots (Fig. 6 ▸) reveals that H⋯H (30.9%), Cl⋯H/H⋯Cl (20.7%), C⋯H/H⋯C (16.8%) and O⋯H/H⋯O (11.4%) inter­actions make the greatest contributions to the surface contacts. The remaining contributions for the title compound are from N⋯H/H⋯N, S⋯H/H⋯S, S⋯C/C⋯S, N⋯C/C⋯N, S⋯N/N⋯S, C⋯C, Cl⋯O/O⋯Cl, O⋯C/C⋯O, N⋯N, Cl⋯Cl, S⋯O/O⋯S, O⋯N/N⋯O and Cl⋯C/C⋯Cl contacts, which are each less than 4.5% and have a negligible effect on the packing. The percentage contributions of all inter­actions are given in Table 3 ▸.
Figure 5

(a) Front view and (b) back view of the three-dimensional Hirshfeld surface of the title compound plotted over d norm in the range −0.4486 to +1.3171 a.u.

Figure 6

Two-dimensional fingerprint plots for the title compound, showing (a) all inter­actions, and delineated into (b) H⋯H, (c) Cl⋯H/H⋯Cl, (d) C⋯H/H⋯C and (e) O⋯H/H⋯O inter­actions. The d i and d e values are the closest inter­nal and external distances (in Å) from given points on the Hirshfeld surface.

Table 3

Percentage contributions of inter­atomic contacts to the Hirshfeld surface for the title compound

ContactPercentage contribution
H⋯H30.9
Cl⋯H/H⋯Cl20.7
C⋯H/H⋯C16.8
O⋯H/H⋯O11.4
N⋯H/H⋯N4.5
S⋯H/H⋯S3.4
S⋯C/C⋯S2.9
N⋯C/C⋯N1.4
S⋯N/N⋯S1.4
C⋯C2.8
Cl⋯O/O⋯Cl0.9
O⋯C/C⋯O0.9
N⋯N0.8
Cl⋯Cl0.4
S⋯O/O⋯S0.3
O⋯N/N⋯O0.2
Cl⋯C/C⋯Cl0.1

Database survey

A search of the Cambridge Structural Database (CSD Version 5.39; Groom et al., 2016 ▸) for similar structures with the 2,3-di­hydro-5H-[1,3]thia­zolo[3,2-a]pyrimidine ring system showed the three closest are those of rac-(2′′S*,2′R*,4′R*,5′′R*,)-ethyl 4′-meth­oxy­carbonyl-5′′-(4-meth­oxy­phen­yl)-1′,7′′-dimethyl-2,3′′-dioxo-2′′,3′′-di­hydro­indoline-3-spiro-2′-pyrrolidine-3′-spiro-2′′-thia­zolo[3,2-a]pyrimidine-6′′-carboxyl­ate [CSD refcode PONWUL (I); Hou et al., 2009 ▸], 3-(4-fluoro­phen­yl)-2-sulfanyl­idene-5-(tri­fluoro­meth­yl)-2,3-di­hydro­[1,3]thia­zolo[4,5-d]pyrimidin-7(6H)-one toluene solvate [WEGSUA (II); Becan et al., 2022 ▸] and 7-ethyl­amino-3-phenyl-5-(tri­fluoro­meth­yl)[1,3]thia­zolo[4,5-d]pyrimidine-2(3H)-thione [WEG­TAH (III); Becan et al., 2022 ▸]. In compound (I), which crystallizes in the triclinic space group P , the two spiro junctions link a planar 2-oxindole ring [with a mean deviation from the plane of 0.0319 (3) Å], a pyrrolidine ring in an envelope conformation and a thia­zolo[3,2-a]pyrimidine system. Two mol­ecules are connected into a dimer by two N—H⋯O hydrogen bonds, forming an (8) graph-set motif. Compound (II) crystallizes as a hemi-solvate in the triclinic space group P . The asymmetric unit is composed of one mol­ecule in the lactim form and half of a toluene mol­ecule. In the crystal structure of (II), the mol­ecules are linked into a centrosymmetric dimer by N—H⋯O hydrogen bonds. Such dimers are further linked via rather weak C—H⋯S and C—H⋯F inter­actions. In addition, aromatic π–π stacking inter­actions are also observed. Compound (III) crystallizes in the P21/n space group with one mol­ecule in the asymmetric unit. Both the thia­zolo­pyrimidine and the phenyl rings are flat and subtend a dihedral angle of 70.8 (1)° to each other. In the crystal of (III), N—H⋯S hydrogen bonds link the mol­ecules into zigzag chains running along the b-axis direction. The inter­chain contacts are provided by weak C—H⋯S and C—H⋯F bonds while C—H⋯π and π–π inter­actions generate the three-dimensional network.

Synthesis and crystallization

A mixture of ethyl 4-(4-chloro­phen­yl)-6-methyl-2-thioxo-1,2,3,4-tetra­hydro­pyrimidine-5-carboxyl­ate (2 mmol), 2-(chloro­meth­yl)-5-(4-chloro­phen­yl)-1,3,4-oxa­diazole (2 mmol), potassium iodide (2 mmol) and triethyl amine (2.5 mmol), was refluxed for 4h in absolute ethanol (20 mL). The reaction mixture was poured onto crushed ice (40 g) and acidified with acetic acid (2 mL). The deposited precipitate was filtered off, washed with cold water, dried and crystallized from a methanol/DMF mixture 4:1 (v/v). Yield: 80%; melting point: 477–779 K; IR (KBr, νmax/cm−1) : 3402, 3174, 1708, 1693, 1651.1H NMR (400 MHz, DMSO-d 6) δ 10.82 (s, 1H, NH), 7.85 (d, J = 8.3 Hz, 2H, Ar—H), 7.57 (d, J = 8.4 Hz, 2H, Ar—H), 7.41 (dd, J = 8.8, 8.4 Hz, 4H, Ar—H), 6.10 (s, 1H, C4—H), 4.46 (d, J = 17.4 Hz, 1H, S—CH2), 4.36 (d, J = 17.4 Hz, 1H, S—CH2), 4.03 (q, J = 5.2 Hz, 2H, CH2—CH3), 2.34 (s, 3H, C6—CH3), 1.12 (t, J = 7.1 Hz, 3H, CH2—CH3). 13C NMR (100 MHz, DMSO-d 6) δ 165.02, 162.17, 153.72, 153.44, 139.52, 136.36, 132.78, 132.16, 129.82, 129.55, 128.41, 128.30, 105.37, 59.85, 54.69, 28.11, 22.66, 13.97. Analysis calculated for C23H20Cl2N4O3S (503.40): C 54.88, H 4.00, N 11.13. Found: C 55.13, H 3.94, N 11.36.

Refinement details

Crystal data, data collection and structure refinement details are summarized in Table 4 ▸. Only the hydrogen atoms of the methyl group attached to C10 were included as riding contributions in idealized positions since independent refinement of them led to an unsatisfactory geometry for this methyl group. All the remaining C and N-bound hydrogen atoms were found in difference-Fourier maps and they were refined freely.
Table 4

Experimental details

Crystal data
Chemical formulaC23H20Cl2N4O3S
M r 503.39
Crystal system, space groupMonoclinic, P21/c
Temperature (K)150
a, b, c (Å)14.8117 (18), 10.7086 (13), 15.1887 (19)
β (°)112.417 (3)
V3)2227.1 (5)
Z 4
Radiation typeCu Kα
μ (mm−1)3.80
Crystal size (mm)0.21 × 0.18 × 0.08
 
Data collection
DiffractometerBruker D8 VENTURE PHOTON 100 CMOS
Absorption correctionNumerical (SADABS; Krause et al., 2015)
T min, T max 0.59, 0.76
No. of measured, independent and observed [I > 2σ(I)] reflections16958, 4497, 4000
R int 0.031
(sin θ/λ)max−1)0.625
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.032, 0.082, 1.05
No. of reflections4497
No. of parameters367
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3)0.23, −0.35

Computer programs: APEX3 and SAINT (Bruker, 2016 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL2018/1 (Sheldrick, 2015b ▸), ORTEP-3 for Windows (Farrugia, 2012 ▸) and PLATON (Spek, 2020 ▸).

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S205698902200603X/vm2265sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S205698902200603X/vm2265Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S205698902200603X/vm2265Isup3.cml CCDC reference: 2177430 Additional supporting information: crystallographic information; 3D view; checkCIF report
C23H20Cl2N4O3SF(000) = 1040
Mr = 503.39Dx = 1.501 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
a = 14.8117 (18) ÅCell parameters from 9966 reflections
b = 10.7086 (13) Åθ = 3.2–74.6°
c = 15.1887 (19) ŵ = 3.80 mm1
β = 112.417 (3)°T = 150 K
V = 2227.1 (5) Å3Plate, pale yellow
Z = 40.21 × 0.18 × 0.08 mm
Bruker D8 VENTURE PHOTON 100 CMOS diffractometer4497 independent reflections
Radiation source: INCOATEC IµS micro–focus source4000 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.031
Detector resolution: 10.4167 pixels mm-1θmax = 74.6°, θmin = 3.2°
ω scansh = −18→17
Absorption correction: numerical (SADABS; Krause et al., 2015)k = −13→12
Tmin = 0.59, Tmax = 0.76l = −18→18
16958 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: mixed
wR(F2) = 0.082H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0409P)2 + 1.0281P] where P = (Fo2 + 2Fc2)/3
4497 reflections(Δ/σ)max = 0.001
367 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.35 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. The hydrogen atoms attached to C10 were included as riding contributions in idealized positions since independent refinement of them led to an unsatisfactory geometry for this methyl group.
xyzUiso*/Ueq
Cl10.17142 (3)0.13315 (4)0.78029 (3)0.03577 (12)
Cl20.88333 (3)−0.06239 (4)0.59045 (3)0.03541 (12)
S10.54003 (3)0.68437 (3)0.77522 (3)0.02275 (10)
O10.06386 (8)0.72960 (11)0.49406 (8)0.0282 (3)
O20.12796 (7)0.58575 (10)0.42622 (7)0.0214 (2)
O30.46040 (8)0.25187 (11)0.44901 (8)0.0277 (3)
N10.35416 (9)0.75804 (11)0.71116 (9)0.0191 (3)
N20.39614 (8)0.58809 (11)0.63452 (9)0.0167 (2)
N30.45875 (9)0.42363 (11)0.57852 (9)0.0182 (2)
N40.54188 (9)0.35323 (11)0.58917 (9)0.0185 (3)
H40.5851 (16)0.339 (2)0.6478 (16)0.034 (5)*
C10.29435 (10)0.54883 (13)0.58144 (10)0.0164 (3)
H10.2883 (13)0.5261 (17)0.5176 (13)0.020 (4)*
C20.22891 (10)0.66068 (13)0.57591 (10)0.0174 (3)
C30.25829 (11)0.75263 (14)0.64191 (10)0.0187 (3)
C40.41675 (10)0.68010 (13)0.70116 (10)0.0173 (3)
C50.56960 (11)0.55753 (14)0.71172 (12)0.0222 (3)
H5A0.6126 (14)0.5860 (18)0.6802 (14)0.026 (5)*
H5B0.6020 (14)0.490 (2)0.7563 (14)0.030 (5)*
C60.47481 (10)0.51442 (13)0.63687 (10)0.0171 (3)
C70.13182 (10)0.66442 (14)0.49758 (10)0.0187 (3)
C80.03585 (11)0.58383 (16)0.34410 (11)0.0242 (3)
H8A0.0046 (14)0.6678 (18)0.3345 (13)0.025 (5)*
H8B0.0558 (14)0.5674 (18)0.2876 (14)0.031 (5)*
C9−0.02993 (13)0.48441 (18)0.35603 (13)0.0312 (4)
H9A−0.0462 (16)0.505 (2)0.4146 (16)0.046 (6)*
H9B−0.0915 (16)0.481 (2)0.2994 (15)0.036 (5)*
H9C0.0007 (15)0.402 (2)0.3634 (15)0.036 (5)*
C100.19597 (11)0.85945 (15)0.64967 (12)0.0244 (3)
H10A0.1636470.8982170.5869850.037*
H10B0.2370710.9214460.6946140.037*
H10C0.1465320.8283650.6724790.037*
C110.26837 (10)0.43898 (13)0.63133 (11)0.0173 (3)
C120.20906 (11)0.34314 (14)0.57860 (11)0.0225 (3)
H120.1865 (15)0.3439 (19)0.5098 (15)0.033 (5)*
C130.17835 (12)0.24801 (15)0.62368 (12)0.0257 (3)
H130.1355 (16)0.183 (2)0.5870 (15)0.038 (6)*
C140.21023 (11)0.24912 (14)0.72190 (12)0.0237 (3)
C150.27240 (12)0.34069 (15)0.77649 (11)0.0228 (3)
H150.2958 (14)0.3367 (18)0.8437 (15)0.026 (5)*
C160.30021 (11)0.43621 (14)0.73052 (11)0.0208 (3)
H160.3430 (14)0.5015 (19)0.7694 (14)0.029 (5)*
C170.53321 (11)0.26487 (14)0.52138 (10)0.0192 (3)
C180.62243 (11)0.18586 (14)0.54149 (10)0.0195 (3)
C190.71484 (11)0.22052 (15)0.60544 (11)0.0203 (3)
H190.7245 (15)0.2983 (19)0.6372 (14)0.030 (5)*
C200.79527 (12)0.14427 (15)0.62055 (11)0.0222 (3)
H200.8601 (14)0.1693 (18)0.6609 (14)0.025 (5)*
C210.78269 (12)0.03304 (15)0.57072 (11)0.0245 (3)
C220.69176 (13)−0.00299 (16)0.50590 (12)0.0274 (3)
H220.6864 (15)−0.080 (2)0.4729 (15)0.038 (6)*
C230.61184 (12)0.07413 (15)0.49123 (11)0.0245 (3)
H230.5501 (15)0.0493 (18)0.4452 (15)0.030 (5)*
U11U22U33U12U13U23
Cl10.0475 (3)0.0231 (2)0.0488 (3)−0.00518 (16)0.0318 (2)0.00199 (17)
Cl20.0330 (2)0.0397 (2)0.0294 (2)0.01712 (17)0.00721 (18)−0.00225 (17)
S10.01551 (18)0.02385 (19)0.02288 (19)−0.00037 (13)0.00060 (15)−0.00508 (14)
O10.0180 (5)0.0331 (6)0.0285 (6)0.0073 (4)0.0032 (5)−0.0054 (5)
O20.0141 (5)0.0247 (5)0.0197 (5)0.0017 (4)0.0002 (4)−0.0039 (4)
O30.0221 (6)0.0340 (6)0.0211 (6)0.0022 (5)0.0016 (5)−0.0051 (5)
N10.0173 (6)0.0195 (6)0.0184 (6)−0.0006 (5)0.0043 (5)−0.0012 (5)
N20.0127 (6)0.0167 (6)0.0181 (6)−0.0003 (4)0.0030 (5)−0.0006 (5)
N30.0155 (6)0.0189 (6)0.0192 (6)0.0023 (5)0.0053 (5)0.0022 (5)
N40.0156 (6)0.0200 (6)0.0177 (6)0.0037 (5)0.0037 (5)0.0006 (5)
C10.0124 (6)0.0184 (7)0.0155 (7)−0.0002 (5)0.0020 (5)−0.0013 (5)
C20.0149 (7)0.0178 (7)0.0181 (7)0.0008 (5)0.0046 (6)0.0012 (5)
C30.0174 (7)0.0198 (7)0.0180 (7)0.0001 (5)0.0058 (6)0.0018 (5)
C40.0167 (7)0.0171 (7)0.0163 (7)−0.0021 (5)0.0044 (6)0.0011 (5)
C50.0159 (7)0.0218 (7)0.0237 (8)0.0003 (6)0.0019 (6)−0.0022 (6)
C60.0146 (6)0.0171 (7)0.0183 (7)0.0005 (5)0.0047 (6)0.0038 (5)
C70.0170 (7)0.0189 (7)0.0187 (7)−0.0001 (5)0.0051 (6)0.0008 (5)
C80.0169 (7)0.0306 (8)0.0187 (7)0.0024 (6)−0.0004 (6)−0.0024 (6)
C90.0210 (8)0.0382 (10)0.0296 (9)−0.0060 (7)0.0042 (7)−0.0050 (7)
C100.0213 (7)0.0241 (8)0.0245 (8)0.0031 (6)0.0050 (6)−0.0044 (6)
C110.0137 (6)0.0167 (7)0.0208 (7)0.0019 (5)0.0056 (6)0.0001 (5)
C120.0218 (7)0.0212 (7)0.0225 (8)−0.0018 (6)0.0063 (6)−0.0025 (6)
C130.0248 (8)0.0198 (7)0.0323 (9)−0.0051 (6)0.0106 (7)−0.0055 (6)
C140.0232 (8)0.0183 (7)0.0343 (9)0.0008 (6)0.0162 (7)0.0017 (6)
C150.0242 (8)0.0228 (7)0.0220 (8)0.0028 (6)0.0096 (6)0.0017 (6)
C160.0196 (7)0.0196 (7)0.0209 (7)−0.0006 (6)0.0052 (6)−0.0012 (6)
C170.0196 (7)0.0211 (7)0.0166 (7)−0.0011 (6)0.0063 (6)0.0017 (5)
C180.0207 (7)0.0219 (7)0.0162 (7)0.0012 (6)0.0076 (6)0.0014 (5)
C190.0208 (7)0.0217 (7)0.0186 (7)−0.0001 (6)0.0078 (6)0.0001 (6)
C200.0207 (7)0.0259 (8)0.0185 (7)0.0011 (6)0.0058 (6)0.0029 (6)
C210.0267 (8)0.0277 (8)0.0199 (7)0.0077 (6)0.0097 (7)0.0032 (6)
C220.0319 (9)0.0262 (8)0.0230 (8)0.0042 (7)0.0092 (7)−0.0046 (6)
C230.0239 (8)0.0266 (8)0.0207 (8)0.0003 (6)0.0060 (7)−0.0042 (6)
Cl1—C141.7459 (16)C8—H8B1.02 (2)
Cl2—C211.7365 (16)C9—H9A1.03 (2)
S1—C41.7421 (15)C9—H9B0.99 (2)
S1—C51.8135 (16)C9—H9C0.98 (2)
O1—C71.2092 (18)C10—H10A0.9800
O2—C71.3566 (18)C10—H10B0.9800
O2—C81.4559 (18)C10—H10C0.9800
O3—C171.2193 (19)C11—C121.389 (2)
N1—C41.2987 (19)C11—C161.397 (2)
N1—C31.4097 (19)C12—C131.397 (2)
N2—C41.3612 (19)C12—H120.97 (2)
N2—C61.3963 (18)C13—C141.382 (2)
N2—C11.4740 (17)C13—H130.96 (2)
N3—C61.2754 (19)C14—C151.384 (2)
N3—N41.3995 (17)C15—C161.387 (2)
N4—C171.3680 (19)C15—H150.95 (2)
N4—H40.89 (2)C16—H160.98 (2)
C1—C21.5228 (19)C17—C181.499 (2)
C1—C111.526 (2)C18—C191.393 (2)
C1—H10.970 (18)C18—C231.396 (2)
C2—C31.353 (2)C19—C201.389 (2)
C2—C71.477 (2)C19—H190.95 (2)
C3—C101.503 (2)C20—C211.385 (2)
C5—C61.503 (2)C20—H200.96 (2)
C5—H5A0.98 (2)C21—C221.386 (2)
C5—H5B0.98 (2)C22—C231.390 (2)
C8—C91.500 (2)C22—H220.95 (2)
C8—H8A1.00 (2)C23—H230.95 (2)
C4—S1—C592.48 (7)H9A—C9—H9C110.0 (18)
C7—O2—C8115.69 (11)H9B—C9—H9C107.6 (17)
C4—N1—C3116.56 (12)C3—C10—H10A109.5
C4—N2—C6116.21 (12)C3—C10—H10B109.5
C4—N2—C1120.38 (12)H10A—C10—H10B109.5
C6—N2—C1121.49 (12)C3—C10—H10C109.5
C6—N3—N4114.05 (12)H10A—C10—H10C109.5
C17—N4—N3117.37 (12)H10B—C10—H10C109.5
C17—N4—H4117.6 (14)C12—C11—C16119.03 (14)
N3—N4—H4118.2 (13)C12—C11—C1120.47 (13)
N2—C1—C2107.61 (11)C16—C11—C1120.43 (13)
N2—C1—C11110.33 (11)C11—C12—C13120.58 (15)
C2—C1—C11110.98 (11)C11—C12—H12119.8 (12)
N2—C1—H1107.7 (10)C13—C12—H12119.5 (12)
C2—C1—H1109.1 (11)C14—C13—C12118.79 (15)
C11—C1—H1111.0 (11)C14—C13—H13120.6 (13)
C3—C2—C7121.09 (13)C12—C13—H13120.6 (13)
C3—C2—C1120.89 (13)C13—C14—C15121.88 (15)
C7—C2—C1118.01 (12)C13—C14—Cl1119.93 (12)
C2—C3—N1122.05 (13)C15—C14—Cl1118.19 (13)
C2—C3—C10125.34 (14)C14—C15—C16118.59 (15)
N1—C3—C10112.60 (13)C14—C15—H15120.0 (12)
N1—C4—N2125.77 (13)C16—C15—H15121.4 (12)
N1—C4—S1121.79 (11)C15—C16—C11121.05 (14)
N2—C4—S1112.44 (10)C15—C16—H16118.2 (12)
C6—C5—S1106.67 (10)C11—C16—H16120.7 (12)
C6—C5—H5A108.6 (11)O3—C17—N4123.67 (14)
S1—C5—H5A111.1 (11)O3—C17—C18121.81 (14)
C6—C5—H5B111.6 (12)N4—C17—C18114.50 (13)
S1—C5—H5B109.7 (12)C19—C18—C23119.04 (14)
H5A—C5—H5B109.2 (16)C19—C18—C17123.16 (14)
N3—C6—N2118.70 (13)C23—C18—C17117.77 (14)
N3—C6—C5129.25 (13)C20—C19—C18120.74 (15)
N2—C6—C5112.05 (12)C20—C19—H19118.7 (12)
O1—C7—O2122.84 (13)C18—C19—H19120.5 (12)
O1—C7—C2126.15 (14)C21—C20—C19119.14 (15)
O2—C7—C2110.99 (12)C21—C20—H20118.8 (11)
O2—C8—C9110.25 (13)C19—C20—H20121.9 (11)
O2—C8—H8A110.1 (11)C20—C21—C22121.28 (15)
C9—C8—H8A111.8 (11)C20—C21—Cl2118.95 (13)
O2—C8—H8B104.2 (11)C22—C21—Cl2119.77 (13)
C9—C8—H8B112.8 (11)C21—C22—C23119.08 (15)
H8A—C8—H8B107.4 (16)C21—C22—H22118.6 (13)
C8—C9—H9A109.4 (13)C23—C22—H22122.3 (13)
C8—C9—H9B110.2 (12)C22—C23—C18120.70 (15)
H9A—C9—H9B108.5 (17)C22—C23—H23118.2 (12)
C8—C9—H9C111.2 (12)C18—C23—H23121.1 (12)
C6—N3—N4—C17−171.54 (13)C1—C2—C7—O1162.79 (15)
C4—N2—C1—C228.34 (17)C3—C2—C7—O2162.47 (13)
C6—N2—C1—C2−168.05 (12)C1—C2—C7—O2−18.75 (18)
C4—N2—C1—C11−92.88 (15)C7—O2—C8—C9−91.73 (16)
C6—N2—C1—C1170.74 (16)N2—C1—C11—C12−142.35 (14)
N2—C1—C2—C3−25.06 (18)C2—C1—C11—C1298.47 (16)
C11—C1—C2—C395.74 (16)N2—C1—C11—C1640.59 (18)
N2—C1—C2—C7156.14 (12)C2—C1—C11—C16−78.60 (16)
C11—C1—C2—C7−83.05 (16)C16—C11—C12—C132.6 (2)
C7—C2—C3—N1−173.09 (13)C1—C11—C12—C13−174.50 (14)
C1—C2—C3—N18.2 (2)C11—C12—C13—C14−1.8 (2)
C7—C2—C3—C105.8 (2)C12—C13—C14—C15−0.8 (2)
C1—C2—C3—C10−172.92 (14)C12—C13—C14—Cl1178.85 (12)
C4—N1—C3—C28.7 (2)C13—C14—C15—C162.4 (2)
C4—N1—C3—C10−170.30 (13)Cl1—C14—C15—C16−177.23 (12)
C3—N1—C4—N2−5.4 (2)C14—C15—C16—C11−1.5 (2)
C3—N1—C4—S1174.58 (10)C12—C11—C16—C15−0.9 (2)
C6—N2—C4—N1−179.75 (14)C1—C11—C16—C15176.17 (13)
C1—N2—C4—N1−15.3 (2)N3—N4—C17—O36.5 (2)
C6—N2—C4—S10.26 (16)N3—N4—C17—C18−175.14 (12)
C1—N2—C4—S1164.71 (10)O3—C17—C18—C19159.59 (15)
C5—S1—C4—N1−178.09 (13)N4—C17—C18—C19−18.8 (2)
C5—S1—C4—N21.90 (11)O3—C17—C18—C23−18.5 (2)
C4—S1—C5—C6−3.28 (11)N4—C17—C18—C23163.08 (13)
N4—N3—C6—N2−177.82 (12)C23—C18—C19—C20−1.2 (2)
N4—N3—C6—C52.2 (2)C17—C18—C19—C20−179.26 (14)
C4—N2—C6—N3177.12 (13)C18—C19—C20—C210.3 (2)
C1—N2—C6—N312.9 (2)C19—C20—C21—C220.4 (2)
C4—N2—C6—C5−2.92 (18)C19—C20—C21—Cl2−179.59 (12)
C1—N2—C6—C5−167.18 (13)C20—C21—C22—C23−0.3 (2)
S1—C5—C6—N3−176.04 (13)Cl2—C21—C22—C23179.70 (13)
S1—C5—C6—N24.01 (15)C21—C22—C23—C18−0.6 (2)
C8—O2—C7—O1−0.2 (2)C19—C18—C23—C221.3 (2)
C8—O2—C7—C2−178.77 (12)C17—C18—C23—C22179.48 (14)
C3—C2—C7—O1−16.0 (2)
D—H···AD—HH···AD···AD—H···A
N4—H4···N1i0.89 (2)2.16 (2)3.0076 (18)158 (2)
C5—H5A···O3ii0.98 (2)2.533 (19)3.081 (2)115.3 (14)
C5—H5B···N1i0.98 (2)2.57 (2)3.453 (2)150.1 (16)
C8—H8B···Cl1iii1.02 (2)2.77 (2)3.4430 (17)123.1 (14)
C15—H15···O3iv0.95 (2)2.54 (2)3.1682 (19)124.5 (17)
  12 in total

1.  Synthesis and in vitro antiproliferative activity of new 1,3,4-oxadiazole derivatives possessing sulfonamide moiety.

Authors:  Mahmoud M Gamal El-Din; Mohammed I El-Gamal; Mohammed S Abdel-Maksoud; Kyung Ho Yoo; Chang-Hyun Oh
Journal:  Eur J Med Chem       Date:  2014-11-06       Impact factor: 6.514

2.  Design, synthesis and anticancer activity of new monastrol analogues bearing 1,3,4-oxadiazole moiety.

Authors:  Fatma A F Ragab; Sahar M Abou-Seri; Salah A Abdel-Aziz; Abdallah M Alfayomy; Mohamed Aboelmagd
Journal:  Eur J Med Chem       Date:  2017-06-15       Impact factor: 6.514

3.  New colorimetric cytotoxicity assay for anticancer-drug screening.

Authors:  P Skehan; R Storeng; D Scudiero; A Monks; J McMahon; D Vistica; J T Warren; H Bokesch; S Kenney; M R Boyd
Journal:  J Natl Cancer Inst       Date:  1990-07-04       Impact factor: 13.506

4.  rac-(4R,17S,18R,26R)-Ethyl 4'-methoxy-carbonyl-5''-(4-methoxy-phen-yl)-1'-methyl-2,3''-dioxo-2'',3''-dihydro-indoline-3-spiro-2'-pyrrolidine-3'-spiro-2''-thia-zolo[3,2-a]pyrimidine-6''-carboxyl-ate.

Authors:  Zhao-Hui Hou; Ning-Bo Zhou; Bin-Hong He; Xiao-Fang Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-28

5.  1,3,4-Oxadiazole-containing histone deacetylase inhibitors: anticancer activities in cancer cells.

Authors:  Sergio Valente; Daniela Trisciuoglio; Teresa De Luca; Angela Nebbioso; Donatella Labella; Alessia Lenoci; Chiara Bigogno; Giulio Dondio; Marco Miceli; Gerald Brosch; Donatella Del Bufalo; Lucia Altucci; Antonello Mai
Journal:  J Med Chem       Date:  2014-07-08       Impact factor: 7.446

6.  Comparison of silver and molybdenum microfocus X-ray sources for single-crystal structure determination.

Authors:  Lennard Krause; Regine Herbst-Irmer; George M Sheldrick; Dietmar Stalke
Journal:  J Appl Crystallogr       Date:  2015-01-30       Impact factor: 3.304

7.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

8.  checkCIF validation ALERTS: what they mean and how to respond.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2020-01-01

9.  The Cambridge Structural Database.

Authors:  Colin R Groom; Ian J Bruno; Matthew P Lightfoot; Suzanna C Ward
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2016-04-01

10.  Synthesis, Structural Characterization and Anticancer Activity of New 5-Trifluoromethyl-2-thioxo-thiazolo[4,5-d]pyrimidine Derivatives.

Authors:  Lilianna Becan; Anna Pyra; Nina Rembiałkowska; Iwona Bryndal
Journal:  Pharmaceuticals (Basel)       Date:  2022-01-13
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.