Literature DB >> 35941369

A complex epigenome-splicing crosstalk governs epithelial-to-mesenchymal transition in metastasis and brain development.

Eneritz Agirre1,2, Mohammed Inayatullah3, Sanjeeb Kumar Sahu4,5, Arun Mahesh3, Neha Tiwari6, Deborah P Lavin3, Aditi Singh3, Susanne Strand7, Mustafa Diken8, Reini F Luco1, Juan Carlos Izpisua Belmonte4,5, Vijay K Tiwari9.   

Abstract

Epithelial-to-mesenchymal transition (EMT) renders epithelial cells migratory properties. While epigenetic and splicing changes have been implicated in EMT, the mechanisms governing their crosstalk remain poorly understood. Here we discovered that a C2H2 zinc finger protein, ZNF827, is strongly induced during various contexts of EMT, including in brain development and breast cancer metastasis, and is required for the molecular and phenotypic changes underlying EMT in these processes. Mechanistically, ZNF827 mediated these responses by orchestrating a large-scale remodelling of the splicing landscape by recruiting HDAC1 for epigenetic modulation of distinct genomic loci, thereby slowing RNA polymerase II progression and altering the splicing of genes encoding key EMT regulators in cis. Our findings reveal an unprecedented complexity of crosstalk between epigenetic landscape and splicing programme in governing EMT and identify ZNF827 as a master regulator coupling these processes during EMT in brain development and breast cancer metastasis.
© 2022. The Author(s), under exclusive licence to Springer Nature Limited.

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Year:  2022        PMID: 35941369     DOI: 10.1038/s41556-022-00971-3

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.213


  58 in total

1.  An ESRP-regulated splicing programme is abrogated during the epithelial-mesenchymal transition.

Authors:  Claude C Warzecha; Peng Jiang; Karine Amirikian; Kimberly A Dittmar; Hezhe Lu; Shihao Shen; Wei Guo; Yi Xing; Russ P Carstens
Journal:  EMBO J       Date:  2010-08-13       Impact factor: 11.598

Review 2.  Regulatory networks defining EMT during cancer initiation and progression.

Authors:  Bram De Craene; Geert Berx
Journal:  Nat Rev Cancer       Date:  2013-02       Impact factor: 60.716

Review 3.  Epigenetics in alternative pre-mRNA splicing.

Authors:  Reini F Luco; Mariano Allo; Ignacio E Schor; Alberto R Kornblihtt; Tom Misteli
Journal:  Cell       Date:  2011-01-07       Impact factor: 41.582

Review 4.  Dynamic integration of splicing within gene regulatory pathways.

Authors:  Ulrich Braunschweig; Serge Gueroussov; Alex M Plocik; Brenton R Graveley; Benjamin J Blencowe
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

Review 5.  The basics of epithelial-mesenchymal transition.

Authors:  Raghu Kalluri; Robert A Weinberg
Journal:  J Clin Invest       Date:  2009-06       Impact factor: 14.808

6.  The in vivo kinetics of RNA polymerase II elongation during co-transcriptional splicing.

Authors:  Yehuda Brody; Noa Neufeld; Nicole Bieberstein; Sebastien Z Causse; Eva-Maria Böhnlein; Karla M Neugebauer; Xavier Darzacq; Yaron Shav-Tal
Journal:  PLoS Biol       Date:  2011-01-11       Impact factor: 8.029

7.  An EMT-driven alternative splicing program occurs in human breast cancer and modulates cellular phenotype.

Authors:  Irina M Shapiro; Albert W Cheng; Nicholas C Flytzanis; Michele Balsamo; John S Condeelis; Maja H Oktay; Christopher B Burge; Frank B Gertler
Journal:  PLoS Genet       Date:  2011-08-18       Impact factor: 5.917

Review 8.  Deciphering Epithelial-Mesenchymal Transition Regulatory Networks in Cancer through Computational Approaches.

Authors:  Gerhard A Burger; Erik H J Danen; Joost B Beltman
Journal:  Front Oncol       Date:  2017-08-03       Impact factor: 6.244

9.  miR-200/375 control epithelial plasticity-associated alternative splicing by repressing the RNA-binding protein Quaking.

Authors:  Katherine A Pillman; Caroline A Phillips; Suraya Roslan; John Toubia; B Kate Dredge; Andrew G Bert; Rachael Lumb; Daniel P Neumann; Xiaochun Li; Simon J Conn; Dawei Liu; Cameron P Bracken; David M Lawrence; Nataly Stylianou; Andreas W Schreiber; Wayne D Tilley; Brett G Hollier; Yeesim Khew-Goodall; Luke A Selth; Gregory J Goodall; Philip A Gregory
Journal:  EMBO J       Date:  2018-06-05       Impact factor: 11.598

Review 10.  Guidelines and definitions for research on epithelial-mesenchymal transition.

Authors:  Jing Yang; Parker Antin; Geert Berx; Cédric Blanpain; Thomas Brabletz; Marianne Bronner; Kyra Campbell; Amparo Cano; Jordi Casanova; Gerhard Christofori; Shoukat Dedhar; Rik Derynck; Heide L Ford; Jonas Fuxe; Antonio García de Herreros; Gregory J Goodall; Anna-Katerina Hadjantonakis; Ruby Y J Huang; Chaya Kalcheim; Raghu Kalluri; Yibin Kang; Yeesim Khew-Goodall; Herbert Levine; Jinsong Liu; Gregory D Longmore; Sendurai A Mani; Joan Massagué; Roberto Mayor; David McClay; Keith E Mostov; Donald F Newgreen; M Angela Nieto; Alain Puisieux; Raymond Runyan; Pierre Savagner; Ben Stanger; Marc P Stemmler; Yoshiko Takahashi; Masatoshi Takeichi; Eric Theveneau; Jean Paul Thiery; Erik W Thompson; Robert A Weinberg; Elizabeth D Williams; Jianhua Xing; Binhua P Zhou; Guojun Sheng
Journal:  Nat Rev Mol Cell Biol       Date:  2020-04-16       Impact factor: 94.444

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