| Literature DB >> 35885949 |
Edita Kunceviciene1,2, Tomas Muskieta1, Margarita Sriubiene1, Rasa Liutkeviciene3,4, Alina Smalinskiene1, Ingrida Grabauskyte5, Ruta Insodaite1, Dovile Juoceviciute1, Laimutis Kucinskas1.
Abstract
PURPOSE: This study aimed to evaluate the associations of GJD2 (rs634990, rs524952) and RASGRF1 (rs8027411, rs4778879, rs28412916) gene polymorphisms with refractive errors.Entities:
Keywords: GJD2; RASGRF1; SNPs; astigmatism; hyperopia; myopia; refractive errors
Mesh:
Substances:
Year: 2022 PMID: 35885949 PMCID: PMC9319995 DOI: 10.3390/genes13071166
Source DB: PubMed Journal: Genes (Basel) ISSN: 2073-4425 Impact factor: 4.141
Characteristics of twin pairs, defined by zygosity.
| Characteristics | MZ Twins | DZ Twins | |
|---|---|---|---|
| Sex, pairs | |||
| Male | 8 | 5 | 0.923 * |
| Female | 14 | 10 | |
| Male/Female | 6 | ||
| Age, years | |||
| Mean ± SE | 22.18 ± 0.51 | 23.03 ± 0.63 | 0.694 ** |
| Median | 20.11 | 22.31 | |
| Min, Max | 18, 39 | 20, 40 | |
| Spherical equivalent, D | |||
| OD Mean ± SE | 3.155 ± 0.20 | 2.995 ± 0.19 | 0.425 ** |
| Median | 3.055 | 2.850 | |
| Min, Max | 0.750, 6.500 | 0.825, 5.125 | |
| OS Mean ± SE | 3.145 ± 0.85 | 2.850 ± 0.63 | 0.071 ** |
| Median | 2.122 | 1.965 | |
| Min, Max | 0.725, 5.65 | 0.815, 3.52 | |
MZ—monozygotic twins; DZ—dizygotic twins, D — diopters, SE — Standard error, p > 0.05—comparison between MZ and DZ twins, *—p value for the chi-square test, **—p value for the Mann–Whitney test.
Figure 1Scatter plots of hyperopia and astigmatism according to spherical equivalent for each twin right eye, for twin 1 versus twin 2 in 44 MZ twin.
Figure 2Scatter plots of hyperopia and astigmatism according to spherical equivalent for each twin right eye, for twin 1 versus twin 2 in 42 DZ twin.
Study cohort for GJD2 and RASGRF1 gene polymorphisms.
| Myopia | Hyperopia | Myopia with Astigmatism | Hyperopia with Astigmatism | Control | |
|---|---|---|---|---|---|
| Gender | |||||
| Male, | 17 (35.42) | 6 (42.86) | 83 (34.73) | 32 (44.44) | 46 (44.23) |
| Female, | 31 (64.58) | 8 (57.14) | 156 (65.27) | 40 (55.56) | 58 (55.77) |
| <0.001 | <0.001 | <0.001 | <0.001 | – | |
| Age | |||||
| Median (Min; Max) | 20 (18; 40) | 20 (19; 26) | 20 (18; 40) | 22.5 (18; 40) | 20 (18; 40) |
| 0.493 | 0.926 | 0.602 | 0.086 | – | |
| Spherical equivalent, D | |||||
| OD | |||||
| Median | −2.75 | 2.35 | −11.25 | 2.5 | 0.15 |
| (Min; Max) | (−5.00; −1.5) | (1; 4.5) | (−17.35; −1.25) | (1.35; 4.37) | (−0.35; 0.35) |
| <0.001 | <0.001 | <0.001 | <0.001 | – | |
| OS | |||||
| Median | −2.5 | 2.25 | −7.125 | 2.75 | −0.125 |
| (Min; Max) | (-3.5; −1.75) | (1.25; 3.75) | (−16.75; −1.35) | (1.875; 5.125) | (0.125; −0.375) |
| <0.001 | <0.001 | <0.001 | <0.001 | – | |
* p-value—calculated significance level, differences are considered statistically significant when p < 0.05—comparison between control and refractive error group; OD—right eye; OS—left eye; D—diopters, min—minimum value; max—maximum value.
The associations between GJD2 and RASGRF1 gene variants and hyperopia with astigmatism.
| Gene | SNP | Genotype | Hyperopia with Astigmatism | Control | OR | 95% C.I. | ||
|---|---|---|---|---|---|---|---|---|
| Lower | Upper | |||||||
|
| rs634990 | CC | 17 | 23 | 1.060 | 0.517 | 2.174 | 0.874 |
| CT | 30 | 59 | 0.508 | 0.273 | 0.946 | 0.033 * | ||
| TT | 23 | 17 | 2.360 | 1.146 | 4.860 | 0.020 * | ||
| rs524952 | AA | 17 | 19 | 1.298 | 0.616 | 2.735 | 0.492 | |
| AT | 31 | 57 | 0.529 | 0.281 | 0.997 | 0.049 * | ||
| TT | 20 | 17 | 1.863 | 0.888 | 3.907 | 0.100 | ||
|
| rs8027411 | TT | 16 | 20 | 1.186 | 0.566 | 2.484 | 0.652 |
| TG | 45 | 63 | 1.058 | 0.569 | 1.968 | 0.858 | ||
| GG | 11 | 20 | 0.748 | 0.334 | 1.676 | 0.481 | ||
| rs4778879 | AA | 23 | 41 | 0.671 | 0.352 | 1.276 | 0.224 | |
| AG | 38 | 39 | 1.792 | 0.959 | 3.348 | 0.068 | ||
| GG | 8 | 16 | 0.656 | 0.263 | 1.632 | 0.364 | ||
| rs28412916 | CC | 22 | 38 | 0.705 | 0.366 | 1.356 | 0.295 | |
| CA | 38 | 39 | 1.786 | 0.951 | 3.356 | 0.071 | ||
| AA | 8 | 17 | 0.604 | 0.244 | 1.494 | 0.275 | ||
*—statistically significant differences at p < 0.05—comparison between hyperopia with astigmatism and control; OR—odds ratio; C.I.—confidence interval.
Associations between haplotype for SNPs in the GJD2 gene and hyperopia.
| Frequency, | OR | 95% C.I. | |||||
|---|---|---|---|---|---|---|---|
| Control | Hyperopia | Lower | Upper | ||||
| T | T | 68 (76.4) | 9 (69.2) | 0.838 | 0.416 | 1.688 | 0.621 |
| C | T | 56 (62.9) | 6 (46.2) | 0.410 | 0.220 | 0.765 | 0.005 * |
| T | A | 53 (59.6) | 7 (53.8) | 0.613 | 0.332 | 1.132 | 0.118 |
| C | A | 72 (80.9) | 10 (76.9) | 0.501 | 0.246 | 1.019 | 0.056 |
*—statistically significant differences at p < 0.05—comparison between control and hyperopia; OR—odds ratio; C.I.—confidence interval.
Associations between haplotype for SNPs in the GJD2 gene and hyperopia with astigmatism.
| Haplotype | Frequency, | OR | 95% C.I. | ||||
|---|---|---|---|---|---|---|---|
| Control | Hyperopia with Astigmatism | Lower | Upper | ||||
| T | T | 68 (76.4) | 49 (74.2) | 0.890 | 0.426 | 1.861 | 0.757 |
| C | T | 56 (62.9) | 26 (39.4) | 0.383 | 0.199 | 0.737 | 0.004 * |
| T | A | 53 (59.6) | 30 (45.5) | 0.566 | 0.297 | 1.077 | 0.083 |
| C | A | 72 (80.9) | 43 (65.2) | 0.441 | 0.212 | 0.918 | 0.029 * |
*—statistically significant differences at p < 0.05—comparison between control and hyperopia with astigmatism; OR—odds ratio; C.I.—confidence interval.
Distribution of SNP rs524952 genotypes according to the degree of hyperopia.
| Gene (SNP) | Genotype | Degree of Refraction, D | OD | OS | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| OR | 95% C.I. | OR | 95% C.I. | |||||||
| Lower | Upper | Lower | Upper | |||||||
| Hyperopia and Hyperopia with Astigmatism ( | ||||||||||
| AA | Low | 0.350 | 2.00 | 0.467 | 8.557 | 0.812 | 0.833 | 0.185 | 3.750 | |
| Moderate | – | – | – | – | – | – | – | |||
| AT | Low | 0.045 * | 0.255 | 0.067 | 0.971 | 0.768 | 0.848 | 0.284 | 2.533 | |
| Moderate | – | – | – | – | 0.850 | 1.273 | 0.105 | 15.385 | ||
| TT | Low | 0.151 | 2.625 | 0.702 | 9.809 | 0.592 | 1.400 | 0.409 | 4.791 | |
| Moderate | – | – | – | – | 0.664 | 1.750 | 0.140 | 21.876 | ||
*—statistically significant differences at p < 0.05; OR—odds ratio; C.I.—confidence interval; OD—right eye; OS—left eye; D—diopters.