Literature DB >> 35855370

Crystal structure and Hirshfeld surface analysis of 4-bromo-2-[3-methyl-5-(2,4,6-tri-methyl-benz-yl)oxazolidin-2-yl]phenol.

Ali N Khalilov1,2, Victor N Khrustalev3,4, Elena A Fortalnova3, Mehmet Akkurt5, Sema Öztürk Yıldırım6,7, Ajaya Bhattarai8, İbrahim G Mamedov2.   

Abstract

The title compound, C20H24BrNO2, is chiral at the carbon atoms on either side of the oxygen atom of the oxazolidine ring and crystallizes as a racemate. The 1,3-oxazolidine ring adopts an envelope conformation with the N atom in an endo position. The mean plane of the oxazolidine ring makes dihedral angles of 77.74 (10) and 45.50 (11)°, respectively, with the 4-bromo-phenol and 1,3,5-tri-methyl-benzene rings. In the crystal, adjacent mol-ecules are connected via C-H⋯O hydrogen bonds and C-H⋯π inter-actions into layers parallel to the (200) plane. The packing is strengthened by van der Waals inter-actions between parallel mol-ecular layers. A Hirshfeld surface analysis shows that H⋯H (58.2%), C⋯H/H⋯C (18.9%), and Br⋯H/H⋯Br (11.5%) inter-actions are the most abundant in the crystal packing. © Khalilov et al. 2022.

Entities:  

Keywords:  1,3-oxazolidine; Hirshfeld surface analysis; crystal structure; hydrogen bond; van der Waals inter­actions

Year:  2022        PMID: 35855370      PMCID: PMC9260360          DOI: 10.1107/S2056989022005928

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Functionalization of amine and carbonyl compounds represents a cornerstone of organic synthesis, material science and medicinal chemistry (Zubkov et al., 2018 ▸; Shikhaliyev et al., 2019 ▸; Viswanathan et al., 2019 ▸; Gurbanov et al., 2020 ▸). In particular, the reaction of 1,2-amino alcohols with oxo compounds is an effective tool in the construction of a broad class of organic compounds such as amides, esters, enamino­nes, ureas, carbamates, aziridines, oxazolidines, oxazolines, oxazolidinones, oxazines, pyrroles, pyridones, morpholines, acridinones etc (Juhász et al., 2011 ▸; Tamura et al., 2014 ▸; Sepideh et al., 2018 ▸; Khalilov, 2021 ▸). In the context of our recent studies, herein we report the structural analysis of a 1,3-oxazolidine, synthesized on the base of racemic 1,2-amino alcohol. Theoretically, in the solid state, this 1,3-oxazolidine can exist as eight optical isomers due to two CH and one N-chiral center. However, NMR analysis of the obtained product indicated the formation of a pair of diastereoisomers in a 1:1 ratio (Khalilov, 2021 ▸) and single-crystal X-ray analysis of the racemic mixture confirmed the 2R,3S,5R- and 2S,3R,5S-configuration of these isomers (Fig. 1 ▸).
Figure 1

Synthesis of the racemic mixture of 2R,3S,5R- and 2S,3R,5S-oxazolidines.

Thus, in the framework of our ongoing structural studies (Naghiyev et al., 2020 ▸, 2021 ▸, 2022 ▸; Khalilov et al., 2022 ▸), we report the crystal structure and Hirshfeld surface analysis of the racemic title compound, 4-bromo-2-[3-methyl-5-(2,4,6-tri­methyl­benz­yl)oxazolidin-2-yl]phenol.

Structural commentary

In the title compound, (Fig. 2 ▸), the 1,3-oxazolidine ring (O1/N3/C2/C4/C5) adopts an envelope conformation with the N atom in an endo position [the puckering parameters (Cremer & Pople, 1975 ▸) are Q(2) = 0.413 (2) Å, φ(2) = 256.7 (3)°]. The mean plane of th oxazolidine ring makes dihedral angles of 77.74 (10) and 45.50 (11)°, respectively, with the 4-bromo­phenol (C6–C11) and the 1,3,5-tri­methyl­benzene (C14–C19) rings. The mol­ecular conformation is stabilized by intra­molecular O11—H11⋯N3 and C20—H20C⋯O1 hydrogen bonds (Table 1 ▸). There are two stereogenic centers in the racaemic title compound and the chirality about the C2 and C5 atoms is R in the chosen asymmetric unit. The geometric properties of the title compound are normal and consistent with those of related compounds listed in the Database survey section.
Figure 2

The mol­ecular structure of the title compound. Displacement ellipsoids are drawn at the 50% probability level.

Table 1

Hydrogen-bond geometry (Å, °)

Cg2 and Cg3 are the centroids of the 4-bromo­phenol (C6–C11) and 1,3,5-tri­methyl­benzene (C14–C19) rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
O11—H11⋯N30.81 (4)1.89 (4)2.644 (2)155 (3)
C4—H4A⋯O1i 0.992.583.564 (2)171
C20—H20B⋯O11ii 0.982.573.548 (3)173
C20—H20C⋯O10.982.553.332 (3)136
C2—H2⋯Cg2i 1.002.913.908 (2)176
C4—H4BCg3i 0.992.883.622 (2)132
C21—H21CCg3iii 0.982.933.723 (4)138

Symmetry codes: (i) ; (ii) ; (iii) .

Supra­molecular features and Hirshfeld surface analysis

In the crystal, adjacent mol­ecules are connected via C—H⋯O hydrogen bonds and C—H⋯π inter­actions into layers parallel to the (200) plane (Table 1 ▸; Figs. 3 ▸ and 4 ▸). The packing is strengthened by van der Waals inter­actions between parallel mol­ecular layers.
Figure 3

A general view of the C—H⋯O hydrogen bonding and C—H⋯π inter­actions of the title compound. Symmetry codes: (i) x, −y +  , z +  ; (ii) x, y + 1, z; (iii) x, −y −  , z −  ; (iv) x, −y +  , z −  .

Figure 4

Packing view of the title compound along the b axis with the inter­actions depicted as in Fig. 3 ▸.

A Hirshfeld surface analysis was performed and the associated two-dimensional fingerprint plots were obtained with CrystalExplorer17.5 (Turner et al., 2017 ▸). The overall two-dimensional fingerprint plot for the title compound is given in Fig. 5 ▸ a, and those delineated into H⋯H (58.2%), C⋯H/H⋯C (18.9%), and Br⋯H/H⋯Br (11.5%) contacts are shown in Fig. 5 ▸ b–d, while numerical details of the different contacts are given in Table 2 ▸. The O⋯H/H⋯O (8.3%), C⋯C (1.4%), Br⋯C/C⋯Br (1.0%), Br⋯O/O⋯Br (0.5%) and Br⋯Br (0.3%) contacts have little directional influence on the mol­ecular packing. A a result, in the crystal packing, C—H⋯π (ring) and van der Waals inter­actions are dominant.
Figure 5

The two-dimensional fingerprint plots of the title compound, showing (a) all inter­actions, and delineated into (b) H⋯H, (c) C⋯H/H⋯C and (d) Br⋯H/H⋯Br inter­actions. [d e and d i represent the distances from a point on the Hirshfeld surface to the nearest atoms outside (external) and inside (inter­nal) the surface, respectively.]

Table 2

Summary of short inter­atomic contacts (Å) in the title compound

ContactDistanceSymmetry operation
Br1⋯H102.961 − x,  + y,  − z
Br1⋯C123.5981 − x,  + y,  − z
C9⋯C83.4091 − x, −y, 1 − z
H9⋯H72.45 x,  − y, −  + z
H11⋯H20B 2.35 x, −1 + y, z
C15⋯H21C 2.80 x,  − y,  + z
H22B⋯C183.07x, 1 − y, 1 − z
H21B⋯H22B 2.51x,  + y,  − z

Database survey

A search of the Cambridge Structural Database (CSD, Version 5.42, update of September 2021; Groom et al., 2016 ▸) for similar structures with a 1,3-oxazolidine ring showed that the five most closely related to the title compound are (S)-5-chloro-N-({2-oxo-3-[4-(3-oxomorpholin-4-yl)phen­yl]oxa­zolidin-5-yl}meth­yl)-thio­phene-2-carboxamide [(I): Shen et al., 2018 ▸], 2,2-di­chloro-1-(2-phenyl-1,3-oxazolidin-3-yl)ethan­one [(II): Ye et al., 2010 ▸], (4-benzyl-2-oxo-1,3-oxazolidin-5-yl)- methyl methane­sulfonate [(III): Cunico et al., 2010 ▸], 2-bromo-4-(3,4-dimethyl-5-phenyl-1,3-oxazolidin-2-yl)-6-meth­oxy­phenol [(IV): Hariono et al., 2012 ▸] and (R)-2-phen­oxy-1-(4-phenyl-2-sulfanyl­idene-1,3-oxazolidin-3-yl)ethanone [(V): Caracelli et al., 2011 ▸]. In the crystal of (I), classical N—H⋯O hydrogen bonds and weak C— H⋯O hydrogen bonds link the mol­ecules into a three-dimensional supra­molecular architecture. In (II), mol­ecules are linked by weak inter­molecular C—H⋯O hydrogen bonds, forming one-dimensional chains. In the crystal of (III), N—H⋯O hydrogen bonds, involving one of the sulfur-bound oxo groups as acceptor, lead to the formation of supra­molecular chains along the b-axis direction. These chains are reinforced by C—H⋯O contacts, with the carbonyl O atom accepting three such inter­actions. In (IV), adjacent mol­ecules are connected via O—H⋯O and C—H⋯O hydrogen bonds and C—H⋯π inter­actions into a zigzag chain along the b-axis direction. In (V), mol­ecules are linked into supra­molecular arrays two mol­ecules thick in the bc plane through C—H⋯O, C—H⋯S and C—H⋯π inter­actions.

Synthesis and crystallization

The title compound was synthesized using our recently reported procedure (Khalilov, 2021 ▸), and colorless needle-like crystals were obtained upon recrystallization from an ethanol/water solution.

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 3 ▸. All C-bound H atoms were placed at calculated positions and refined using a riding model, with C—H = 0.95 to 1.00 Å, and with U iso(H) = 1.2 or 1.5U eq(C). The hydroxyl H atom was found in a difference-Fourier map and was refined freely.
Table 3

Experimental details

Crystal data
Chemical formulaC20H24BrNO2
M r 390.30
Crystal system, space groupMonoclinic, P21/c
Temperature (K)100
a, b, c (Å)21.1019 (3), 9.01359 (11), 10.03985 (11)
β (°)96.1425 (11)
V3)1898.66 (4)
Z 4
Radiation typeCu Kα
μ (mm−1)3.03
Crystal size (mm)0.32 × 0.04 × 0.03
 
Data collection
DiffractometerXtaLAB Synergy, Dualflex, HyPix
Absorption correctionMulti-scan (CrysAlis PRO; Rigaku OD, 2021)
T min, T max 0.424, 0.882
No. of measured, independent and observed [I > 2σ(I)] reflections21431, 4096, 3783
R int 0.043
(sin θ/λ)max−1)0.638
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.033, 0.096, 1.07
No. of reflections4096
No. of parameters225
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3)0.58, −0.60

Computer programs: CrysAlis PRO (Rigaku OD, 2021 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL2018 (Sheldrick, 2015b ▸), ORTEP-3 for Windows (Farrugia, 2012 ▸) and PLATON (Spek, 2020 ▸).

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989022005928/tx2051sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989022005928/tx2051Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989022005928/tx2051Isup3.cml CCDC reference: 2176709 Additional supporting information: crystallographic information; 3D view; checkCIF report
C20H24BrNO2F(000) = 808
Mr = 390.30Dx = 1.365 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54184 Å
a = 21.1019 (3) ÅCell parameters from 13703 reflections
b = 9.01359 (11) Åθ = 2.1–78.6°
c = 10.03985 (11) ŵ = 3.03 mm1
β = 96.1425 (11)°T = 100 K
V = 1898.66 (4) Å3Needle, colourless
Z = 40.32 × 0.04 × 0.03 mm
XtaLAB Synergy, Dualflex, HyPix diffractometer3783 reflections with I > 2σ(I)
Radiation source: micro-focus sealed X-ray tubeRint = 0.043
φ and ω scansθmax = 79.6°, θmin = 2.1°
Absorption correction: multi-scan (CrysAlisPro; Rigaku OD, 2021)h = −25→26
Tmin = 0.424, Tmax = 0.882k = −11→11
21431 measured reflectionsl = −12→10
4096 independent reflections
Refinement on F2Primary atom site location: difference Fourier map
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: mixed
wR(F2) = 0.096H atoms treated by a mixture of independent and constrained refinement
S = 1.07w = 1/[σ2(Fo2) + (0.055P)2 + 1.11P] where P = (Fo2 + 2Fc2)/3
4096 reflections(Δ/σ)max = 0.001
225 parametersΔρmax = 0.58 e Å3
0 restraintsΔρmin = −0.60 e Å3
Experimental. CrysAlisPro 1.171.41.117a (Rigaku OD, 2021) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
Br10.54220 (2)0.31515 (2)0.43375 (2)0.02813 (9)
O10.27633 (7)0.25150 (17)0.58702 (14)0.0298 (3)
C20.32957 (9)0.1726 (2)0.65118 (19)0.0232 (4)
H20.35170.23340.72560.028*
N30.30119 (8)0.03941 (18)0.70533 (15)0.0240 (3)
C40.24396 (10)0.0998 (2)0.7578 (2)0.0286 (4)
H4A0.25480.15180.84410.034*
H4B0.21240.02100.76960.034*
C50.21970 (10)0.2075 (2)0.6467 (2)0.0275 (4)
H50.19010.15410.57850.033*
C60.37483 (9)0.1367 (2)0.54907 (18)0.0226 (4)
C70.42805 (9)0.2251 (2)0.53991 (18)0.0235 (4)
H70.43640.30660.59910.028*
C80.46904 (9)0.1942 (2)0.44404 (19)0.0229 (4)
C90.45780 (9)0.0753 (2)0.35676 (18)0.0238 (4)
H90.48650.05410.29250.029*
C100.40439 (10)−0.0118 (2)0.36452 (18)0.0255 (4)
H100.3961−0.09250.30430.031*
C110.36252 (9)0.0175 (2)0.45995 (18)0.0237 (4)
O110.31123 (7)−0.07205 (17)0.46493 (15)0.0287 (3)
H110.2980 (17)−0.053 (4)0.536 (4)0.050 (9)*
C120.34457 (10)−0.0365 (2)0.8069 (2)0.0295 (4)
H12A0.3823−0.07070.76650.044*
H12B0.3228−0.12180.84180.044*
H12C0.35770.03230.88030.044*
C130.18595 (10)0.3429 (2)0.6965 (2)0.0293 (4)
H13A0.15020.30930.74530.035*
H13B0.21620.39820.76060.035*
C140.16029 (10)0.4466 (2)0.5851 (2)0.0288 (4)
C150.19383 (11)0.5761 (2)0.5574 (2)0.0301 (4)
C160.16792 (12)0.6723 (3)0.4563 (2)0.0361 (5)
H160.19040.76030.43890.043*
C170.11055 (12)0.6426 (3)0.3812 (3)0.0430 (6)
C180.07858 (11)0.5135 (4)0.4079 (3)0.0452 (6)
H180.03930.49150.35640.054*
C190.10236 (10)0.4145 (3)0.5084 (2)0.0365 (5)
C200.25709 (13)0.6141 (3)0.6335 (2)0.0393 (5)
H20A0.25120.63440.72730.059*
H20B0.27480.70210.59380.059*
H20C0.28650.53040.62910.059*
C210.08362 (15)0.7492 (5)0.2732 (3)0.0650 (10)
H21A0.07760.84680.31310.097*
H21B0.04250.71190.23180.097*
H21C0.11330.75810.20500.097*
C220.06445 (12)0.2765 (4)0.5315 (3)0.0523 (7)
H22A0.08590.18970.49850.079*
H22B0.02170.28530.48350.079*
H22C0.06110.26510.62760.079*
U11U22U33U12U13U23
Br10.02612 (13)0.02966 (14)0.02922 (14)−0.00322 (7)0.00584 (9)0.00477 (7)
O10.0269 (7)0.0344 (8)0.0296 (7)0.0054 (6)0.0103 (6)0.0108 (6)
C20.0242 (9)0.0241 (9)0.0216 (8)−0.0010 (7)0.0035 (7)0.0011 (7)
N30.0258 (8)0.0261 (8)0.0201 (7)−0.0015 (6)0.0024 (6)0.0029 (6)
C40.0291 (9)0.0332 (10)0.0245 (9)−0.0019 (8)0.0076 (7)0.0037 (8)
C50.0270 (10)0.0315 (10)0.0249 (9)−0.0003 (8)0.0068 (7)0.0021 (8)
C60.0254 (9)0.0250 (9)0.0173 (8)0.0018 (7)0.0018 (6)0.0021 (7)
C70.0269 (9)0.0231 (8)0.0201 (8)0.0005 (7)0.0007 (7)0.0015 (7)
C80.0223 (9)0.0250 (9)0.0212 (9)−0.0002 (7)0.0014 (7)0.0040 (7)
C90.0257 (9)0.0273 (9)0.0183 (8)0.0048 (7)0.0018 (6)0.0014 (7)
C100.0296 (9)0.0266 (9)0.0197 (8)0.0039 (8)0.0005 (7)−0.0025 (7)
C110.0260 (9)0.0238 (9)0.0209 (8)−0.0015 (7)0.0002 (7)0.0039 (7)
O110.0297 (7)0.0317 (8)0.0249 (7)−0.0075 (6)0.0040 (6)−0.0043 (6)
C120.0347 (10)0.0290 (10)0.0239 (9)0.0027 (8)−0.0009 (8)0.0043 (8)
C130.0312 (10)0.0322 (10)0.0260 (10)0.0005 (8)0.0093 (8)0.0018 (8)
C140.0282 (9)0.0335 (10)0.0264 (9)0.0076 (8)0.0109 (7)0.0004 (8)
C150.0369 (11)0.0319 (10)0.0231 (9)0.0056 (8)0.0102 (8)−0.0007 (8)
C160.0421 (13)0.0376 (12)0.0314 (11)0.0092 (9)0.0167 (10)0.0062 (9)
C170.0364 (12)0.0587 (15)0.0361 (12)0.0159 (11)0.0142 (10)0.0169 (11)
C180.0252 (10)0.0668 (17)0.0435 (13)0.0095 (11)0.0032 (9)0.0111 (12)
C190.0240 (9)0.0471 (13)0.0392 (11)0.0059 (9)0.0072 (8)0.0041 (10)
C200.0515 (14)0.0358 (12)0.0306 (11)−0.0086 (10)0.0039 (10)−0.0001 (9)
C210.0446 (15)0.094 (3)0.0574 (17)0.0211 (17)0.0119 (13)0.0422 (19)
C220.0265 (11)0.0609 (17)0.0689 (18)−0.0046 (12)0.0016 (11)0.0095 (15)
Br1—C81.9019 (19)C12—H12B0.9800
O1—C21.424 (2)C12—H12C0.9800
O1—C51.448 (2)C13—C141.513 (3)
C2—N31.472 (2)C13—H13A0.9900
C2—C61.509 (3)C13—H13B0.9900
C2—H21.0000C14—C191.404 (3)
N3—C121.465 (2)C14—C151.407 (3)
N3—C41.472 (3)C15—C161.401 (3)
C4—C51.525 (3)C15—C201.505 (3)
C4—H4A0.9900C16—C171.382 (4)
C4—H4B0.9900C16—H160.9500
C5—C131.524 (3)C17—C181.385 (4)
C5—H51.0000C17—C211.513 (4)
C6—C71.388 (3)C18—C191.399 (4)
C6—C111.404 (3)C18—H180.9500
C7—C81.389 (3)C19—C221.510 (4)
C7—H70.9500C20—H20A0.9800
C8—C91.388 (3)C20—H20B0.9800
C9—C101.383 (3)C20—H20C0.9800
C9—H90.9500C21—H21A0.9800
C10—C111.396 (3)C21—H21B0.9800
C10—H100.9500C21—H21C0.9800
C11—O111.356 (2)C22—H22A0.9800
O11—H110.81 (4)C22—H22B0.9800
C12—H12A0.9800C22—H22C0.9800
C2—O1—C5108.79 (14)H12A—C12—H12C109.5
O1—C2—N3104.01 (15)H12B—C12—H12C109.5
O1—C2—C6109.02 (15)C14—C13—C5113.25 (17)
N3—C2—C6112.83 (16)C14—C13—H13A108.9
O1—C2—H2110.3C5—C13—H13A108.9
N3—C2—H2110.3C14—C13—H13B108.9
C6—C2—H2110.3C5—C13—H13B108.9
C12—N3—C2112.92 (16)H13A—C13—H13B107.7
C12—N3—C4113.51 (15)C19—C14—C15119.3 (2)
C2—N3—C4102.26 (15)C19—C14—C13120.0 (2)
N3—C4—C5101.41 (15)C15—C14—C13120.7 (2)
N3—C4—H4A111.5C16—C15—C14119.4 (2)
C5—C4—H4A111.5C16—C15—C20118.9 (2)
N3—C4—H4B111.5C14—C15—C20121.7 (2)
C5—C4—H4B111.5C17—C16—C15121.8 (2)
H4A—C4—H4B109.3C17—C16—H16119.1
O1—C5—C13110.61 (17)C15—C16—H16119.1
O1—C5—C4104.45 (16)C16—C17—C18118.2 (2)
C13—C5—C4113.71 (17)C16—C17—C21120.5 (3)
O1—C5—H5109.3C18—C17—C21121.3 (3)
C13—C5—H5109.3C17—C18—C19122.1 (2)
C4—C5—H5109.3C17—C18—H18119.0
C7—C6—C11119.50 (17)C19—C18—H18119.0
C7—C6—C2119.82 (17)C18—C19—C14119.2 (2)
C11—C6—C2120.64 (17)C18—C19—C22118.8 (2)
C6—C7—C8119.94 (18)C14—C19—C22122.0 (2)
C6—C7—H7120.0C15—C20—H20A109.5
C8—C7—H7120.0C15—C20—H20B109.5
C9—C8—C7121.00 (18)H20A—C20—H20B109.5
C9—C8—Br1119.54 (14)C15—C20—H20C109.5
C7—C8—Br1119.46 (15)H20A—C20—H20C109.5
C10—C9—C8119.20 (17)H20B—C20—H20C109.5
C10—C9—H9120.4C17—C21—H21A109.5
C8—C9—H9120.4C17—C21—H21B109.5
C9—C10—C11120.70 (18)H21A—C21—H21B109.5
C9—C10—H10119.7C17—C21—H21C109.5
C11—C10—H10119.7H21A—C21—H21C109.5
O11—C11—C10118.61 (18)H21B—C21—H21C109.5
O11—C11—C6121.74 (17)C19—C22—H22A109.5
C10—C11—C6119.65 (18)C19—C22—H22B109.5
C11—O11—H11105 (2)H22A—C22—H22B109.5
N3—C12—H12A109.5C19—C22—H22C109.5
N3—C12—H12B109.5H22A—C22—H22C109.5
H12A—C12—H12B109.5H22B—C22—H22C109.5
N3—C12—H12C109.5
C5—O1—C2—N323.8 (2)C7—C6—C11—O11179.93 (17)
C5—O1—C2—C6144.39 (16)C2—C6—C11—O11−2.2 (3)
O1—C2—N3—C12−163.70 (15)C7—C6—C11—C100.9 (3)
C6—C2—N3—C1278.3 (2)C2—C6—C11—C10178.71 (17)
O1—C2—N3—C4−41.36 (18)O1—C5—C13—C1464.6 (2)
C6—C2—N3—C4−159.35 (16)C4—C5—C13—C14−178.21 (18)
C12—N3—C4—C5163.78 (17)C5—C13—C14—C1980.4 (2)
C2—N3—C4—C541.84 (18)C5—C13—C14—C15−99.8 (2)
C2—O1—C5—C13125.28 (18)C19—C14—C15—C161.7 (3)
C2—O1—C5—C42.6 (2)C13—C14—C15—C16−178.05 (18)
N3—C4—C5—O1−27.6 (2)C19—C14—C15—C20−178.2 (2)
N3—C4—C5—C13−148.32 (17)C13—C14—C15—C202.1 (3)
O1—C2—C6—C798.9 (2)C14—C15—C16—C17−1.0 (3)
N3—C2—C6—C7−146.13 (17)C20—C15—C16—C17178.9 (2)
O1—C2—C6—C11−79.0 (2)C15—C16—C17—C18−0.1 (4)
N3—C2—C6—C1136.0 (2)C15—C16—C17—C21179.6 (2)
C11—C6—C7—C8−0.7 (3)C16—C17—C18—C190.5 (4)
C2—C6—C7—C8−178.59 (17)C21—C17—C18—C19−179.2 (3)
C6—C7—C8—C9−0.2 (3)C17—C18—C19—C140.2 (4)
C6—C7—C8—Br1−179.44 (14)C17—C18—C19—C22179.8 (3)
C7—C8—C9—C101.0 (3)C15—C14—C19—C18−1.3 (3)
Br1—C8—C9—C10−179.76 (14)C13—C14—C19—C18178.4 (2)
C8—C9—C10—C11−0.9 (3)C15—C14—C19—C22179.1 (2)
C9—C10—C11—O11−179.15 (17)C13—C14—C19—C22−1.1 (3)
C9—C10—C11—C6−0.1 (3)
D—H···AD—HH···AD···AD—H···A
O11—H11···N30.81 (4)1.89 (4)2.644 (2)155 (3)
C4—H4A···O1i0.992.583.564 (2)171
C20—H20B···O11ii0.982.573.548 (3)173
C20—H20C···O10.982.553.332 (3)136
C2—H2···Cg2i1.002.913.908 (2)176
C4—H4B···Cg3i0.992.883.622 (2)132
C21—H21C···Cg3iii0.982.933.723 (4)138
  13 in total

1.  Crystal structure and Hirshfeld surface analysis of 6-amino-8-(2,6-di-chloro-phen-yl)-1,3,4,8-tetra-hydro-2H-pyrido[1,2-a]pyrimidine-7,9-dicarbo-nitrile.

Authors:  Farid N Naghiyev; Tatiana A Tereshina; Victor N Khrustalev; Mehmet Akkurt; Rovnag M Rzayev; Anzurat A Akobirshoeva; İbrahim G Mamedov
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2021-04-09

2.  2-(2-(2,4-dioxopentan-3-ylidene)hydrazineyl)benzonitrile as novel inhibitor of receptor tyrosine kinase and PI3K/AKT/mTOR signaling pathway in glioblastoma.

Authors:  Anisha Viswanathan; Dinesh Kute; Aliyu Musa; Saravanan Konda Mani; Vili Sipilä; Frank Emmert-Streib; Fedor I Zubkov; Atash V Gurbanov; Olli Yli-Harja; Meenakshisundaram Kandhavelu
Journal:  Eur J Med Chem       Date:  2019-01-22       Impact factor: 6.514

3.  Crystal structure and Hirshfeld surface analysis of 1-(tert-butyl-amino)-3-mesitylpropan-2-ol hemi-hydrate.

Authors:  Ali N Khalilov; Victor N Khrustalev; Tatiana A Tereshina; Mehmet Akkurt; Rovnag M Rzayev; Anzurat A Akobirshoeva; İbrahim G Mamedov
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2022-04-28

4.  (4-Benzyl-2-oxo-1,3-oxazolidin-5-yl)methyl methane-sulfonate.

Authors:  Wilson Cunico; Claudia R B Gomes; Edward R T Tiekink; Walcimar T Vellasco Junior; James L Wardell; Solange M S V Wardell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-09

5.  (R)-2-Phen-oxy-1-(4-phenyl-2-sulfan-ylidene-1,3-oxazolidin-3-yl)ethanone.

Authors:  Ignez Caracelli; Daniel C S Coelho; Paulo R Olivato; Thiago C Correra; Alessandro Rodrigues; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-30

6.  SHELXT - integrated space-group and crystal-structure determination.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A Found Adv       Date:  2015-01-01       Impact factor: 2.290

7.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

8.  checkCIF validation ALERTS: what they mean and how to respond.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2020-01-01

9.  The Cambridge Structural Database.

Authors:  Colin R Groom; Ian J Bruno; Matthew P Lightfoot; Suzanna C Ward
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2016-04-01

10.  Crystal structure of (S)-5-chloro-N-({2-oxo-3-[4-(3-oxomorpholin-4-yl)phen-yl]oxazolidin-5-yl}meth-yl)thio-phene-2-carboxamide.

Authors:  Jie Shen; Gu-Ping Tang; Xiu-Rong Hu
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-01-01
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