| Literature DB >> 21579707 |
Wilson Cunico, Claudia R B Gomes, Edward R T Tiekink, Walcimar T Vellasco Junior, James L Wardell, Solange M S V Wardell.
Abstract
The title compound, C(12)H(15)NO(5)S, features an approximately planar five-membered oxazolidin ring (r.m.s. deviation = 0.045 Å) with the peripheral benzyl and methyl methane-sulfonate residues lying to either side of the plane. In the crystal, N-H⋯O hydrogen bonds, involving one of the sulfur-bound oxo groups as acceptor, lead to the formation of supra-molecular chains along the b axis. These chains are reinforced by C-H⋯O contacts with the carbonyl O atom accepting three such inter-actions. The structure was refined as a racemic twin, with the major component being present 89% of the time.Entities:
Year: 2010 PMID: 21579707 PMCID: PMC2979937 DOI: 10.1107/S1600536809055020
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H15NO5S | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 7909 reflections |
| θ = 2.9–27.5° | |
| µ = 0.27 mm−1 | |
| β = 103.317 (3)° | Plate, colourless |
| 0.26 × 0.08 × 0.02 mm | |
| Nonius KappaCCD area-detector diffractometer | 2587 independent reflections |
| Radiation source: Enraf Nonius FR591 rotating anode | 2266 reflections with |
| 10 cm confocal mirrors | |
| Detector resolution: 9.091 pixels mm-1 | θmax = 26.5°, θmin = 3.2° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 6748 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2587 reflections | (Δ/σ)max < 0.001 |
| 177 parameters | Δρmax = 0.33 e Å−3 |
| 2 restraints | Δρmin = −0.36 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.44667 (11) | 0.00547 (18) | 0.67229 (8) | 0.0215 (2) | |
| O1 | 0.6105 (3) | 0.0327 (6) | 0.7186 (2) | 0.0284 (7) | |
| O2 | 0.3629 (4) | −0.1750 (5) | 0.7089 (2) | 0.0283 (8) | |
| O3 | 0.4391 (3) | −0.0275 (5) | 0.5504 (2) | 0.0210 (7) | |
| O4 | 0.2132 (3) | 0.2865 (5) | 0.4405 (2) | 0.0222 (7) | |
| O5 | 0.0104 (3) | 0.5267 (5) | 0.4294 (2) | 0.0233 (6) | |
| N1 | −0.0074 (4) | 0.2084 (6) | 0.3228 (3) | 0.0223 (8) | |
| H1N | −0.1104 (13) | 0.208 (8) | 0.305 (4) | 0.027* | |
| C1 | 0.3493 (6) | 0.2628 (8) | 0.6800 (4) | 0.0278 (11) | |
| H1A | 0.3625 | 0.3063 | 0.7545 | 0.042* | |
| H1B | 0.2370 | 0.2448 | 0.6473 | 0.042* | |
| H1C | 0.3937 | 0.3815 | 0.6425 | 0.042* | |
| C2 | 0.2907 (5) | −0.1031 (7) | 0.4793 (3) | 0.0207 (9) | |
| H2A | 0.2078 | −0.1193 | 0.5196 | 0.025* | |
| H2B | 0.3058 | −0.2524 | 0.4478 | 0.025* | |
| C3 | 0.2425 (5) | 0.0726 (7) | 0.3934 (3) | 0.0208 (9) | |
| H3 | 0.3280 | 0.0922 | 0.3544 | 0.025* | |
| C4 | 0.0626 (5) | 0.3548 (7) | 0.3990 (3) | 0.0209 (9) | |
| C5 | 0.0868 (4) | 0.0065 (9) | 0.3147 (3) | 0.0198 (8) | |
| H5 | 0.0396 | −0.1304 | 0.3410 | 0.024* | |
| C6 | 0.1067 (5) | −0.0349 (8) | 0.2020 (3) | 0.0246 (10) | |
| H6A | 0.1506 | 0.1036 | 0.1763 | 0.030* | |
| H6B | 0.1824 | −0.1607 | 0.2030 | 0.030* | |
| C7 | −0.0472 (5) | −0.0941 (8) | 0.1270 (3) | 0.0229 (9) | |
| C8 | −0.1231 (5) | 0.0627 (8) | 0.0526 (3) | 0.0289 (11) | |
| H8 | −0.0773 | 0.2083 | 0.0492 | 0.035* | |
| C9 | −0.2646 (5) | 0.0105 (11) | −0.0168 (3) | 0.0333 (10) | |
| H9 | −0.3146 | 0.1199 | −0.0674 | 0.040* | |
| C10 | −0.3333 (6) | −0.1999 (9) | −0.0126 (4) | 0.0326 (11) | |
| H10 | −0.4308 | −0.2360 | −0.0597 | 0.039* | |
| C11 | −0.2577 (6) | −0.3580 (8) | 0.0615 (4) | 0.0301 (11) | |
| H11 | −0.3037 | −0.5033 | 0.0653 | 0.036* | |
| C12 | −0.1161 (5) | −0.3054 (8) | 0.1297 (4) | 0.0267 (10) | |
| H12 | −0.0651 | −0.4160 | 0.1792 | 0.032* |
| S1 | 0.0215 (5) | 0.0219 (5) | 0.0206 (5) | −0.0014 (5) | 0.0037 (4) | −0.0012 (5) |
| O1 | 0.0221 (14) | 0.036 (2) | 0.0237 (15) | −0.0046 (16) | −0.0008 (11) | −0.0039 (15) |
| O2 | 0.0333 (19) | 0.0263 (18) | 0.0235 (17) | −0.0045 (15) | 0.0030 (14) | 0.0029 (14) |
| O3 | 0.0161 (13) | 0.0277 (18) | 0.0178 (13) | −0.0015 (13) | 0.0007 (10) | −0.0043 (13) |
| O4 | 0.0176 (15) | 0.0207 (15) | 0.0260 (16) | 0.0016 (12) | 0.0001 (12) | −0.0014 (13) |
| O5 | 0.0240 (14) | 0.0174 (16) | 0.0294 (15) | 0.0013 (14) | 0.0082 (12) | 0.0000 (14) |
| N1 | 0.0172 (18) | 0.026 (2) | 0.024 (2) | 0.0008 (15) | 0.0046 (15) | −0.0014 (15) |
| C1 | 0.032 (3) | 0.021 (2) | 0.031 (3) | 0.000 (2) | 0.009 (2) | −0.005 (2) |
| C2 | 0.020 (2) | 0.022 (2) | 0.019 (2) | 0.0003 (17) | 0.0018 (17) | −0.0022 (17) |
| C3 | 0.020 (2) | 0.014 (2) | 0.028 (2) | −0.0019 (15) | 0.0052 (17) | −0.0025 (16) |
| C4 | 0.022 (2) | 0.021 (2) | 0.021 (2) | −0.0033 (18) | 0.0066 (17) | 0.0057 (17) |
| C5 | 0.0181 (17) | 0.0195 (19) | 0.0217 (19) | 0.001 (2) | 0.0041 (14) | 0.006 (2) |
| C6 | 0.022 (2) | 0.026 (3) | 0.025 (2) | 0.0009 (18) | 0.0060 (17) | 0.0007 (18) |
| C7 | 0.027 (2) | 0.026 (2) | 0.017 (2) | 0.0023 (18) | 0.0080 (18) | −0.0022 (17) |
| C8 | 0.035 (2) | 0.029 (3) | 0.024 (2) | −0.001 (2) | 0.0093 (19) | 0.0006 (18) |
| C9 | 0.041 (2) | 0.035 (3) | 0.020 (2) | 0.004 (3) | 0.0000 (18) | −0.003 (3) |
| C10 | 0.027 (2) | 0.043 (3) | 0.027 (3) | 0.003 (2) | 0.003 (2) | −0.007 (2) |
| C11 | 0.033 (3) | 0.024 (3) | 0.034 (3) | −0.005 (2) | 0.008 (2) | −0.003 (2) |
| C12 | 0.029 (2) | 0.028 (2) | 0.022 (2) | −0.001 (2) | 0.0024 (18) | 0.0016 (19) |
| S1—O1 | 1.427 (3) | C3—H3 | 1.0000 |
| S1—O2 | 1.430 (3) | C5—C6 | 1.529 (5) |
| S1—O3 | 1.578 (3) | C5—H5 | 1.0000 |
| S1—C1 | 1.749 (5) | C6—C7 | 1.507 (6) |
| O3—C2 | 1.475 (5) | C6—H6A | 0.9900 |
| O4—C4 | 1.362 (5) | C6—H6B | 0.9900 |
| O4—C3 | 1.445 (5) | C7—C12 | 1.383 (6) |
| O5—C4 | 1.210 (5) | C7—C8 | 1.387 (6) |
| N1—C4 | 1.346 (6) | C8—C9 | 1.385 (6) |
| N1—C5 | 1.462 (6) | C8—H8 | 0.9500 |
| N1—H1N | 0.875 (10) | C9—C10 | 1.381 (8) |
| C1—H1A | 0.9800 | C9—H9 | 0.9500 |
| C1—H1B | 0.9800 | C10—C11 | 1.390 (7) |
| C1—H1C | 0.9800 | C10—H10 | 0.9500 |
| C2—C3 | 1.506 (5) | C11—C12 | 1.379 (7) |
| C2—H2A | 0.9900 | C11—H11 | 0.9500 |
| C2—H2B | 0.9900 | C12—H12 | 0.9500 |
| C3—C5 | 1.550 (5) | ||
| O1—S1—O2 | 118.9 (2) | N1—C4—O4 | 109.6 (4) |
| O1—S1—O3 | 103.99 (16) | N1—C5—C6 | 112.8 (3) |
| O2—S1—O3 | 109.53 (18) | N1—C5—C3 | 99.9 (4) |
| O1—S1—C1 | 109.4 (2) | C6—C5—C3 | 113.2 (3) |
| O2—S1—C1 | 109.2 (2) | N1—C5—H5 | 110.2 |
| O3—S1—C1 | 104.8 (2) | C6—C5—H5 | 110.2 |
| C2—O3—S1 | 119.4 (2) | C3—C5—H5 | 110.2 |
| C4—O4—C3 | 109.8 (3) | C7—C6—C5 | 111.9 (3) |
| C4—N1—C5 | 113.8 (4) | C7—C6—H6A | 109.2 |
| C4—N1—H1N | 117 (3) | C5—C6—H6A | 109.2 |
| C5—N1—H1N | 123 (3) | C7—C6—H6B | 109.2 |
| S1—C1—H1A | 109.5 | C5—C6—H6B | 109.2 |
| S1—C1—H1B | 109.5 | H6A—C6—H6B | 107.9 |
| H1A—C1—H1B | 109.5 | C12—C7—C8 | 118.2 (4) |
| S1—C1—H1C | 109.5 | C12—C7—C6 | 121.3 (4) |
| H1A—C1—H1C | 109.5 | C8—C7—C6 | 120.5 (4) |
| H1B—C1—H1C | 109.5 | C9—C8—C7 | 121.1 (5) |
| O3—C2—C3 | 108.1 (3) | C9—C8—H8 | 119.4 |
| O3—C2—H2A | 110.1 | C7—C8—H8 | 119.4 |
| C3—C2—H2A | 110.1 | C10—C9—C8 | 120.2 (5) |
| O3—C2—H2B | 110.1 | C10—C9—H9 | 119.9 |
| C3—C2—H2B | 110.1 | C8—C9—H9 | 119.9 |
| H2A—C2—H2B | 108.4 | C9—C10—C11 | 118.9 (4) |
| O4—C3—C2 | 109.3 (3) | C9—C10—H10 | 120.5 |
| O4—C3—C5 | 106.4 (3) | C11—C10—H10 | 120.5 |
| C2—C3—C5 | 111.6 (3) | C12—C11—C10 | 120.4 (5) |
| O4—C3—H3 | 109.8 | C12—C11—H11 | 119.8 |
| C2—C3—H3 | 109.8 | C10—C11—H11 | 119.8 |
| C5—C3—H3 | 109.8 | C11—C12—C7 | 121.1 (4) |
| O5—C4—N1 | 129.1 (4) | C11—C12—H12 | 119.5 |
| O5—C4—O4 | 121.3 (4) | C7—C12—H12 | 119.5 |
| O1—S1—O3—C2 | 168.8 (3) | C2—C3—C5—N1 | 123.5 (4) |
| O2—S1—O3—C2 | 40.7 (4) | O4—C3—C5—C6 | 124.6 (4) |
| C1—S1—O3—C2 | −76.4 (3) | C2—C3—C5—C6 | −116.3 (4) |
| S1—O3—C2—C3 | 122.4 (3) | N1—C5—C6—C7 | −66.3 (5) |
| C4—O4—C3—C2 | −121.3 (4) | C3—C5—C6—C7 | −178.9 (4) |
| C4—O4—C3—C5 | −0.7 (4) | C5—C6—C7—C12 | −73.9 (5) |
| O3—C2—C3—O4 | −62.6 (4) | C5—C6—C7—C8 | 106.5 (5) |
| O3—C2—C3—C5 | 180.0 (3) | C12—C7—C8—C9 | 0.4 (6) |
| C5—N1—C4—O5 | −174.4 (4) | C6—C7—C8—C9 | −180.0 (4) |
| C5—N1—C4—O4 | 7.3 (5) | C7—C8—C9—C10 | 0.3 (7) |
| C3—O4—C4—O5 | 177.7 (4) | C8—C9—C10—C11 | −0.5 (7) |
| C3—O4—C4—N1 | −3.8 (5) | C9—C10—C11—C12 | −0.1 (7) |
| C4—N1—C5—C6 | −127.6 (4) | C10—C11—C12—C7 | 0.9 (7) |
| C4—N1—C5—C3 | −7.1 (4) | C8—C7—C12—C11 | −1.0 (7) |
| O4—C3—C5—N1 | 4.4 (4) | C6—C7—C12—C11 | 179.4 (4) |
| H··· | ||||
| N1—H1N···O2i | 0.88 (2) | 2.28 (2) | 3.113 (5) | 160 (4) |
| C1—H1B···O5ii | 0.98 | 2.51 | 3.428 (6) | 155 |
| C2—H2A···O5ii | 0.99 | 2.32 | 3.214 (5) | 150 |
| C5—H5···O5iii | 1.00 | 2.36 | 3.326 (6) | 162 |
| C6—H6B···O1iv | 0.99 | 2.59 | 3.528 (6) | 158 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.88 (2) | 2.28 (2) | 3.113 (5) | 160 (4) |
| C1—H1 | 0.98 | 2.51 | 3.428 (6) | 155 |
| C2—H2 | 0.99 | 2.32 | 3.214 (5) | 150 |
| C5—H5⋯O5iii | 1.00 | 2.36 | 3.326 (6) | 162 |
| C6—H6 | 0.99 | 2.59 | 3.528 (6) | 158 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .