Literature DB >> 22065310

(R)-2-Phen-oxy-1-(4-phenyl-2-sulfan-ylidene-1,3-oxazolidin-3-yl)ethanone.

Ignez Caracelli, Daniel C S Coelho, Paulo R Olivato, Thiago C Correra, Alessandro Rodrigues, Edward R T Tiekink.   

Abstract

The central 1,3-oxazolidine-2-thione ring in the title compound, C(17)H(15)n class="Chemical">NO(3)S, is approximately planar with maximum deviations of 0.036 (4) and -0.041 (5) Å for the O and methyl-ene-C atoms, respectively. The dihedral angles formed between this plane and the two benzene rings, which lie to the same side of the central plane, are 86.5 (2) [ring-bound benzene] and 50.6 (3)°. The ethan-1-one residue is also twisted out of the central plane, forming a O-C-N-C torsion angle of 151.5 (5)°. The dihedral angle formed by the benzene rings is 62.8 (2)° so that overall, the mol-ecule has a twisted U-shape. In the crystal, mol-ecules are linked into supra-molecular arrays two mol-ecules thick in the bc plane through C-H⋯O, C-H⋯S and C-H⋯π inter-actions.

Entities:  

Year:  2011        PMID: 22065310      PMCID: PMC3201535          DOI: 10.1107/S160053681103858X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to oxazolidine-2-thio­nes, see: Evans et al. (1981 ▶); Crimmins & King (1998 ▶); Zhang et al. (2004) ▶; Shinisha & Sunoj (2010 ▶); Tamura et al. (2009 ▶). For related structures, see: Kitoh et al. (2002 ▶). For the synthesis, see: Wu et al. (2004 ▶); Rodrigues et al. (2005 ▶).

Experimental

Crystal data

C17H15NO3S M = 313.37 Monoclinic, a = 33.514 (3) Å b = 5.7514 (6) Å c = 7.7172 (8) Å β = 93.808 (7)° V = 1484.2 (3) Å3 Z = 4 Mo Kα radiation μ = 0.23 mm−1 T = 126 K 0.30 × 0.25 × 0.16 mm

Data collection

Bruker APEXII CCD diffractometer 7408 measured reflections 2588 independent reflections 2166 reflections with I > 2σ(I) R int = 0.064

Refinement

R[F 2 > 2σ(F 2)] = 0.066 wR(F 2) = 0.180 S = 1.08 2588 reflections 199 parameters 1 restraint H-atom parameters constrained Δρmax = 0.81 e Å−3 Δρmin = −0.47 e Å−3 Absolute structure: Flack (1983 ▶), 1143 Friedel pairs Flack parameter: 0.01 (18) Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: MarvinSketch (Chemaxon, 2010 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681103858X/hg5095sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681103858X/hg5095Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681103858X/hg5095Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H15NO3SF(000) = 656
Mr = 313.37Dx = 1.402 Mg m3
Monoclinic, C2Mo Kα radiation, λ = 0.71073 Å
Hall symbol: C 2yCell parameters from 2062 reflections
a = 33.514 (3) Åθ = 2.7–26.4°
b = 5.7514 (6) ŵ = 0.23 mm1
c = 7.7172 (8) ÅT = 126 K
β = 93.808 (7)°Block, colourless
V = 1484.2 (3) Å30.30 × 0.25 × 0.16 mm
Z = 4
Bruker APEXII CCD diffractometer2166 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.064
graphiteθmax = 25.0°, θmin = 2.7°
φ and ω scansh = −39→36
7408 measured reflectionsk = −6→6
2588 independent reflectionsl = −8→9
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.066H-atom parameters constrained
wR(F2) = 0.180w = 1/[σ2(Fo2) + (0.1039P)2 + 1.9443P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max < 0.001
2588 reflectionsΔρmax = 0.81 e Å3
199 parametersΔρmin = −0.47 e Å3
1 restraintAbsolute structure: Flack (1983), 1143 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.01 (18)
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.71650 (13)0.0824 (8)0.6314 (6)0.0265 (11)
C20.70382 (14)0.0160 (10)0.3371 (6)0.0298 (11)
H2A0.6857−0.11250.29840.036*
H2B0.72190.04990.24390.036*
C30.67974 (14)0.2332 (8)0.3797 (6)0.0248 (10)
H30.69060.37170.32020.030*
C40.63525 (14)0.2206 (8)0.3422 (6)0.0240 (10)
C50.61306 (13)0.0403 (10)0.4132 (6)0.0284 (10)
H50.6263−0.07650.48230.034*
C60.57230 (14)0.0333 (10)0.3826 (6)0.0311 (10)
H60.5574−0.08730.43230.037*
C70.55245 (14)0.2019 (10)0.2792 (7)0.0332 (12)
H70.52430.19480.25640.040*
C80.57425 (15)0.3789 (9)0.2104 (7)0.0311 (11)
H80.56090.49500.14090.037*
C90.61494 (15)0.3893 (8)0.2410 (6)0.0274 (11)
H90.62950.51260.19280.033*
C100.67735 (13)0.4532 (9)0.6533 (7)0.0272 (11)
C110.67426 (15)0.4547 (9)0.8496 (7)0.0318 (12)
H11A0.66080.31090.88560.038*
H11B0.70140.45860.90860.038*
C120.61226 (14)0.6591 (8)0.8538 (6)0.0242 (10)
C130.59105 (15)0.4913 (9)0.7557 (6)0.0310 (12)
H130.60450.35860.71490.037*
C140.55026 (14)0.5183 (10)0.7176 (6)0.0319 (11)
H140.53600.40380.64980.038*
C150.52995 (15)0.7094 (10)0.7768 (7)0.0343 (12)
H150.50190.72470.75250.041*
C160.55166 (17)0.8801 (10)0.8735 (7)0.0358 (12)
H160.53821.01300.91380.043*
C170.59217 (15)0.8566 (9)0.9103 (6)0.0291 (11)
H170.60660.97420.97410.035*
N0.68964 (11)0.2510 (7)0.5738 (5)0.0255 (9)
O10.72682 (10)−0.0467 (6)0.4973 (4)0.0305 (8)
O20.66648 (10)0.6161 (6)0.5650 (4)0.0300 (8)
O30.65227 (10)0.6512 (6)0.8994 (4)0.0306 (8)
S0.73540 (4)0.0379 (2)0.82903 (16)0.0340 (4)
U11U22U33U12U13U23
C10.023 (2)0.030 (3)0.026 (3)0.0007 (18)0.0016 (18)0.001 (2)
C20.035 (2)0.034 (3)0.021 (2)0.003 (2)−0.0009 (18)0.000 (2)
C30.037 (3)0.025 (2)0.012 (2)0.004 (2)0.0019 (18)0.0023 (19)
C40.035 (3)0.023 (2)0.014 (2)0.0003 (19)0.0044 (18)−0.0011 (19)
C50.035 (2)0.026 (2)0.024 (2)−0.002 (2)−0.0004 (18)0.001 (2)
C60.037 (3)0.028 (2)0.029 (3)−0.003 (2)0.0054 (19)−0.002 (3)
C70.023 (2)0.049 (3)0.027 (3)0.000 (2)−0.002 (2)−0.006 (2)
C80.037 (3)0.035 (3)0.021 (3)0.003 (2)−0.001 (2)−0.005 (2)
C90.039 (3)0.025 (3)0.019 (3)0.002 (2)0.004 (2)−0.002 (2)
C100.021 (2)0.027 (2)0.034 (3)−0.0025 (18)−0.001 (2)0.000 (2)
C110.032 (3)0.033 (3)0.030 (3)0.002 (2)−0.001 (2)0.001 (2)
C120.029 (2)0.024 (2)0.020 (2)−0.0033 (18)0.0030 (18)−0.001 (2)
C130.036 (3)0.032 (3)0.026 (3)−0.004 (2)0.011 (2)−0.006 (2)
C140.033 (3)0.038 (3)0.024 (2)−0.004 (2)0.0004 (18)−0.003 (2)
C150.031 (3)0.039 (3)0.033 (3)0.004 (2)0.000 (2)0.004 (2)
C160.045 (3)0.034 (3)0.029 (3)0.009 (2)0.006 (2)0.001 (2)
C170.040 (3)0.027 (3)0.020 (3)0.000 (2)0.003 (2)0.000 (2)
N0.026 (2)0.031 (2)0.019 (2)0.0027 (17)−0.0002 (15)−0.0011 (18)
O10.0286 (18)0.0299 (19)0.032 (2)0.0042 (13)−0.0022 (14)0.0018 (15)
O20.0333 (19)0.029 (2)0.0276 (19)0.0021 (14)0.0027 (14)0.0049 (16)
O30.036 (2)0.0321 (18)0.0238 (18)0.0025 (14)0.0029 (14)−0.0057 (15)
S0.0338 (6)0.0398 (7)0.0275 (7)0.0061 (6)−0.0047 (4)0.0051 (6)
C1—O11.338 (6)C9—H90.9500
C1—N1.377 (6)C10—O21.201 (6)
C1—S1.632 (5)C10—N1.390 (6)
C2—O11.458 (5)C10—C111.525 (7)
C2—C31.535 (7)C11—O31.416 (6)
C2—H2A0.9900C11—H11A0.9900
C2—H2B0.9900C11—H11B0.9900
C3—C41.501 (6)C12—O31.364 (6)
C3—N1.516 (6)C12—C131.392 (7)
C3—H31.0000C12—C171.404 (7)
C4—C91.394 (7)C13—C141.388 (7)
C4—C51.408 (7)C13—H130.9500
C5—C61.371 (6)C14—C151.386 (8)
C5—H50.9500C14—H140.9500
C6—C71.396 (7)C15—C161.407 (8)
C6—H60.9500C15—H150.9500
C7—C81.379 (8)C16—C171.375 (7)
C7—H70.9500C16—H160.9500
C8—C91.370 (7)C17—H170.9500
C8—H80.9500
O1—C1—N109.7 (4)O2—C10—N119.3 (4)
O1—C1—S122.1 (3)O2—C10—C11121.4 (4)
N—C1—S128.1 (4)N—C10—C11119.0 (4)
O1—C2—C3106.0 (4)O3—C11—C10110.2 (4)
O1—C2—H2A110.5O3—C11—H11A109.6
C3—C2—H2A110.5C10—C11—H11A109.6
O1—C2—H2B110.5O3—C11—H11B109.6
C3—C2—H2B110.5C10—C11—H11B109.6
H2A—C2—H2B108.7H11A—C11—H11B108.1
C4—C3—N110.1 (4)O3—C12—C13125.1 (4)
C4—C3—C2116.7 (4)O3—C12—C17115.5 (4)
N—C3—C2100.5 (3)C13—C12—C17119.4 (4)
C4—C3—H3109.7C14—C13—C12119.8 (5)
N—C3—H3109.7C14—C13—H13120.1
C2—C3—H3109.7C12—C13—H13120.1
C9—C4—C5118.6 (4)C15—C14—C13121.2 (5)
C9—C4—C3121.0 (4)C15—C14—H14119.4
C5—C4—C3120.3 (4)C13—C14—H14119.4
C6—C5—C4120.0 (5)C14—C15—C16118.7 (5)
C6—C5—H5120.0C14—C15—H15120.6
C4—C5—H5120.0C16—C15—H15120.6
C5—C6—C7120.6 (5)C17—C16—C15120.6 (5)
C5—C6—H6119.7C17—C16—H16119.7
C7—C6—H6119.7C15—C16—H16119.7
C8—C7—C6119.2 (4)C16—C17—C12120.2 (5)
C8—C7—H7120.4C16—C17—H17119.9
C6—C7—H7120.4C12—C17—H17119.9
C9—C8—C7120.8 (5)C1—N—C10130.8 (4)
C9—C8—H8119.6C1—N—C3111.6 (4)
C7—C8—H8119.6C10—N—C3116.2 (4)
C8—C9—C4120.7 (5)C1—O1—C2111.7 (3)
C8—C9—H9119.7C12—O3—C11118.5 (4)
C4—C9—H9119.7
O1—C2—C3—C4−124.8 (4)C15—C16—C17—C12−1.0 (8)
O1—C2—C3—N−5.8 (5)O3—C12—C17—C16−179.0 (5)
N—C3—C4—C9119.5 (5)C13—C12—C17—C162.0 (7)
C2—C3—C4—C9−126.8 (5)O1—C1—N—C10−163.8 (4)
N—C3—C4—C5−58.7 (6)S—C1—N—C1014.6 (7)
C2—C3—C4—C554.9 (6)O1—C1—N—C31.3 (5)
C9—C4—C5—C6−0.1 (7)S—C1—N—C3179.7 (4)
C3—C4—C5—C6178.1 (4)O2—C10—N—C1151.5 (5)
C4—C5—C6—C71.0 (7)C11—C10—N—C1−34.2 (7)
C5—C6—C7—C8−1.2 (7)O2—C10—N—C3−13.1 (6)
C6—C7—C8—C90.7 (7)C11—C10—N—C3161.2 (4)
C7—C8—C9—C40.1 (7)C4—C3—N—C1126.7 (4)
C5—C4—C9—C8−0.4 (7)C2—C3—N—C13.0 (5)
C3—C4—C9—C8−178.7 (4)C4—C3—N—C10−65.8 (5)
O2—C10—C11—O38.6 (6)C2—C3—N—C10170.5 (4)
N—C10—C11—O3−165.6 (4)N—C1—O1—C2−5.5 (5)
O3—C12—C13—C14179.9 (4)S—C1—O1—C2175.9 (4)
C17—C12—C13—C14−1.2 (7)C3—C2—O1—C17.3 (5)
C12—C13—C14—C15−0.5 (8)C13—C12—O3—C11−2.3 (7)
C13—C14—C15—C161.5 (8)C17—C12—O3—C11178.8 (4)
C14—C15—C16—C17−0.7 (8)C10—C11—O3—C1269.4 (5)
Cg1 and Cg2 are the centroids of the C4–C9 and C12–C17 rings, respectively.
D—H···AD—HH···AD···AD—H···A
C5—H5···O2i0.952.293.202 (6)162
C9—H9···O3ii0.952.563.350 (6)140
C11—H11b···Siii0.992.873.814 (5)160
C17—H17···Cg1iv0.952.993.703 (5)133
C8—H8···Cg2ii0.952.793.523 (6)135
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C4–C9 and C12–C17 rings, respectively.

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5⋯O2i0.952.293.202 (6)162
C9—H9⋯O3ii0.952.563.350 (6)140
C11—H11b⋯Siii0.992.873.814 (5)160
C17—H17⋯Cg1iv0.952.993.703 (5)133
C8—H8⋯Cg2ii0.952.793.523 (6)135

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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