Literature DB >> 35854726

DaT3M: A Data Tracker for Multi-faceted Management of Multi-site Clinical Research Data Submission, Curation, Master Inventorying, and Sharing.

Shiqiang Tao1,2, Licong Cui3,2, Wei-Chun Chou1,2, Samden Lhatoo1,2, Guo-Qiang Zhang1,3,2.   

Abstract

Managing research data is an important and challenging aspect of clinical studies, especially for multi-site collaboratives. To address this challenge, we designed, developed and deployed a multi-faceted, multi-level interactive data tracker (DaT3M) for multi-site clinical research data submission, curation, master inventorying, and sharing. Components of DaT3M include data overview, data portal, data status panel, data query engine, and data downloader. DaT3M managed clinical research data for the Center for SUDEP Research (CSR). The CSR instance of DaT3M includes 2,743 subjects from seven data contributing institutions, 7 data modalities and 10,678 data components: 3,398 Epilepsy Monitoring Unit reports, 3,440 electroencephalography recordings, 629 MRI imaging datasets, 177 bio-chemistry datasets, 722 DNA datasets, 2,289 follow-up forms, and 30 SUDEP forms. Preliminary, structured, one-on-one usability evaluations were performed with 7 researchers from four institutions. System Usability Score reached 85.3, showing that DaT3M has achieved high levels of user satisfaction based on our pilot evaluation. ©2022 AMIA - All rights reserved.

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Year:  2022        PMID: 35854726      PMCID: PMC9285149     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  15 in total

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Authors:  Conor J Shields; Emmanuel Tiret; Desmond C Winter
Journal:  Ann Surg       Date:  2010-11       Impact factor: 12.969

2.  Architecture of the open-source clinical research chart from Informatics for Integrating Biology and the Bedside.

Authors:  Shawn N Murphy; Michael Mendis; Kristel Hackett; Rajesh Kuttan; Wensong Pan; Lori C Phillips; Vivian Gainer; David Berkowicz; John P Glaser; Isaac Kohane; Henry C Chueh
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

3.  Facilitating Cohort Discovery by Enhancing Ontology Exploration, Query Management and Query Sharing for Large Clinical Data Repositories.

Authors:  Shiqiang Tao; Licong Cui; Xi Wu; Guo-Qiang Zhang
Journal:  AMIA Annu Symp Proc       Date:  2018-04-16

4.  The REDCap consortium: Building an international community of software platform partners.

Authors:  Paul A Harris; Robert Taylor; Brenda L Minor; Veida Elliott; Michelle Fernandez; Lindsay O'Neal; Laura McLeod; Giovanni Delacqua; Francesco Delacqua; Jacqueline Kirby; Stephany N Duda
Journal:  J Biomed Inform       Date:  2019-05-09       Impact factor: 6.317

5.  MEDCIS: Multi-Modality Epilepsy Data Capture and Integration System.

Authors:  Guo-Qiang Zhang; Licong Cui; Samden Lhatoo; Stephan U Schuele; Satya S Sahoo
Journal:  AMIA Annu Symp Proc       Date:  2014-11-14

6.  Practice guideline summary: Sudden unexpected death in epilepsy incidence rates and risk factors: Report of the Guideline Development, Dissemination, and Implementation Subcommittee of the American Academy of Neurology and the American Epilepsy Society.

Authors:  Cynthia Harden; Torbjörn Tomson; David Gloss; Jeffrey Buchhalter; J Helen Cross; Elizabeth Donner; Jacqueline A French; Anthony Gil-Nagel; Dale C Hesdorffer; W Henry Smithson; Mark C Spitz; Thaddeus S Walczak; Josemir W Sander; Philippe Ryvlin
Journal:  Neurology       Date:  2017-04-25       Impact factor: 9.910

7.  Epilepsy and seizure ontology: towards an epilepsy informatics infrastructure for clinical research and patient care.

Authors:  Satya S Sahoo; Samden D Lhatoo; Deepak K Gupta; Licong Cui; Meng Zhao; Catherine Jayapandian; Alireza Bozorgi; Guo-Qiang Zhang
Journal:  J Am Med Inform Assoc       Date:  2013-05-18       Impact factor: 4.497

8.  Data management in clinical research: An overview.

Authors:  Binny Krishnankutty; Shantala Bellary; Naveen B R Kumar; Latha S Moodahadu
Journal:  Indian J Pharmacol       Date:  2012-03       Impact factor: 1.200

9.  NHash: Randomized N-Gram Hashing for Distributed Generation of Validatable Unique Study Identifiers in Multicenter Research.

Authors:  Guo-Qiang Zhang; Shiqiang Tao; Guangming Xing; Jeno Mozes; Bilal Zonjy; Samden D Lhatoo; Licong Cui
Journal:  JMIR Med Inform       Date:  2015-11-10

10.  The FAIR Guiding Principles for scientific data management and stewardship.

Authors:  Mark D Wilkinson; Michel Dumontier; I Jsbrand Jan Aalbersberg; Gabrielle Appleton; Myles Axton; Arie Baak; Niklas Blomberg; Jan-Willem Boiten; Luiz Bonino da Silva Santos; Philip E Bourne; Jildau Bouwman; Anthony J Brookes; Tim Clark; Mercè Crosas; Ingrid Dillo; Olivier Dumon; Scott Edmunds; Chris T Evelo; Richard Finkers; Alejandra Gonzalez-Beltran; Alasdair J G Gray; Paul Groth; Carole Goble; Jeffrey S Grethe; Jaap Heringa; Peter A C 't Hoen; Rob Hooft; Tobias Kuhn; Ruben Kok; Joost Kok; Scott J Lusher; Maryann E Martone; Albert Mons; Abel L Packer; Bengt Persson; Philippe Rocca-Serra; Marco Roos; Rene van Schaik; Susanna-Assunta Sansone; Erik Schultes; Thierry Sengstag; Ted Slater; George Strawn; Morris A Swertz; Mark Thompson; Johan van der Lei; Erik van Mulligen; Jan Velterop; Andra Waagmeester; Peter Wittenburg; Katherine Wolstencroft; Jun Zhao; Barend Mons
Journal:  Sci Data       Date:  2016-03-15       Impact factor: 6.444

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  1 in total

1.  A multimodal clinical data resource for personalized risk assessment of sudden unexpected death in epilepsy.

Authors:  Xiaojin Li; Shiqiang Tao; Samden D Lhatoo; Licong Cui; Yan Huang; Johnson P Hampson; Guo-Qiang Zhang
Journal:  Front Big Data       Date:  2022-08-17
  1 in total

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