Monika Wasilewska1, Paulina Żeliszewska1, Katarzyna Pogoda2, Piotr Deptuła3, Robert Bucki3, Zbigniew Adamczyk1. 1. Jerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, PL-30239 Krakow, Poland. 2. Institute of Nuclear Physics, Polish Academy of Sciences, PL-31342 Krakow, Poland. 3. Department of Medical Microbiology and Nanobiomedical Engineering, Medical University of Białystok, PL-15222 Białystok, Poland.
Abstract
Adsorption kinetics of human vimentin on negatively charged substrates (mica, silica, and polymer particles) was analyzed using atomic force microscopy (AFM), quartz microbalance (QCM), and the laser doppler velocimetry (LDV) method. AFM studies realized under diffusion conditions proved that the adsorbed protein layer mainly consisted of aggregates in the form of compact tetramers and hexamers of a size equal to 11-12 nm. These results were consistent with vimentin adsorption kinetics under flow conditions investigated by QCM. It was established that vimentin aggregates efficiently adsorbed on the negatively charged silica sensor at pH 3.5 and 7.4, forming compact layers with the coverage reaching 3.5 mg m-2. Additionally, the formation of the vimentin corona at polymer particles was examined using the LDV method and interpreted in terms of the electrokinetic model. This allowed us to determine the zeta potential of the corona as a function of pH and the electrokinetic charge of aggregates, which was equal to -0.7 e nm-2 at pH 7.4 in a 10 mM NaCl solution. The anomalous adsorption of aggregates exhibiting an average negative charge on the negatively charged substrates was interpreted as a result of a heterogeneous charge distribution. These investigations confirmed that it is feasible to deposit stable vimentin layers both at planar substrates and at carrier particles with well-controlled coverage and zeta potential. They can be used for investigations of vimentin interactions with various ligands including receptors of the innate immune system, immunoglobulins, bacterial virulence factors, and spike proteins of viruses.
Adsorption kinetics of human vimentin on negatively charged substrates (mica, silica, and polymer particles) was analyzed using atomic force microscopy (AFM), quartz microbalance (QCM), and the laser doppler velocimetry (LDV) method. AFM studies realized under diffusion conditions proved that the adsorbed protein layer mainly consisted of aggregates in the form of compact tetramers and hexamers of a size equal to 11-12 nm. These results were consistent with vimentin adsorption kinetics under flow conditions investigated by QCM. It was established that vimentin aggregates efficiently adsorbed on the negatively charged silica sensor at pH 3.5 and 7.4, forming compact layers with the coverage reaching 3.5 mg m-2. Additionally, the formation of the vimentin corona at polymer particles was examined using the LDV method and interpreted in terms of the electrokinetic model. This allowed us to determine the zeta potential of the corona as a function of pH and the electrokinetic charge of aggregates, which was equal to -0.7 e nm-2 at pH 7.4 in a 10 mM NaCl solution. The anomalous adsorption of aggregates exhibiting an average negative charge on the negatively charged substrates was interpreted as a result of a heterogeneous charge distribution. These investigations confirmed that it is feasible to deposit stable vimentin layers both at planar substrates and at carrier particles with well-controlled coverage and zeta potential. They can be used for investigations of vimentin interactions with various ligands including receptors of the innate immune system, immunoglobulins, bacterial virulence factors, and spike proteins of viruses.
Vimentin is a member of the family of
intermediate filament proteins,
which are the constituents of highly ordered cell fiber networks.[1] It is a crucial component of the cytoskeleton
that assures a proper architecture of cells and mechanical defense
against extracellular stress. Vimentin participates in cellular processes
linked with numerous diseases, for example, cataract formation (vimentin
filaments have an essential role in maintaining the lens morphology
and integrity),[2] inflammation (rheumatoid
arthritis and Crohn’s disease)[3,4] and different
cancers.[5−8] It also plays an essential role in wound healing.[9] Likewise, it mediates the activation of a number of signaling
pathways.[10] It is also involved in cell
infections by RNA and DNA viruses. Reference (11) reports a significant
role of vimentin in SARS-CoV virus entry through interaction with
its spike protein. Therefore, it was classified as a cellular factor
prevalent in the SARS-CoV spike protein-ACE2 complexes, suggesting
that it may serve as a target for antiviral drugs.As far as
the basic structure is concerned, monomeric vimentin
consists of a single 464 amino acid chain, mostly alpha-helical,[12] which is split into three coiled-coil sections
(77 amino acid “head,” a 326-residue “rod,”
and a 61-residue “tail”).[12−14] The molar mass of monomeric vimentin
equals 53.5 kg mol–1 (kDa).[15] However, despite its essential significance, little is known about
the basic physicochemical properties of the molecule, which is mainly
due to the fact that, unlike actin and tubulin, it is resistant to
crystallization, except for small fragments.[16] Therefore, adequate molecular dynamics modeling considering the
molecule folding was not performed. In consequence, the molecule size,
conformations, and charge as a function of pH were not theoretically
predicted.On the other hand, the experimental investigations
are mainly focused
on vimentin assembly mechanisms and kinetics. In a simplified model
of vimentin organization, two monomers create parallel coiled coils
and then two dimers build a tetramer by antiparallel dimerization.
It is assumed that the tetramer length equals to 60 nm and the diameter
equals to 5 nm.[17,18] Such tetramers remain stable
in low-salt buffers. Afterward, unit-length filaments (ULFs) are created
by the lateral assembly of eight tetramers in longitudinal annealing
and compaction processes having the diameter of 11 nm.[19] In cells vimentin molecules form various structures
ranging from soluble tetramers to the filaments[20,21] Vimentin molecule assembly can be triggered in vitro by the presence
of KCl or NaCl, and this process has been extensively studied.[22−26]However, despite the significance of vimentin biological functions
and key role in many cellular processes, there is scarce information
in the literature concerning its basic properties and adsorption kinetics
for solid supports. Because of the deficit of such data, the main
objective of this paper was to acquire comprehensive characteristics
of vimentin molecule aggregates comprising their electrokinetic properties
and to elucidate mechanisms of their adsorption at planar substrates
such as mica or silica. The results obtained in such model systems
are complemented by investigations of vimentin corona formation at
polymer carrier particles using in situ electrokinetic techniques.
The newly acquired knowledge is used to develop efficient procedures
for the preparation of stable vimentin monolayers in solid substrates
of well-defined coverage, molecule orientation, and charge distribution.
It is argued that such layers can be exploited in systematic studies
focused on determining vimentin interactions with macroion ligands
comprising immunoglobulins or spike proteins of SARS-CoV-2.
Materials and Methods
All chemicals used in experiments
were reagents of analytical grade
and were used without any extra purification. His-tagged recombinant
human vimentin (lyophilized from sterile 40% acetonitrile, 0.1% TFA)
was purchased from Sino Biological (10028-H08B). The stock suspension
was reduced to a concentration of 0.1–5 mg L–1 before each experiment.Sodium chloride (NaCl) and phosphate-buffered
saline (PBS) were
commercial products of Sigma-Aldrich. Other chemical reagents (NaOH,
HCl, etc.) were obtained from Avantor Performance Materials Poland
S.A. Distilled water was obtained using a Milli-Q Elix&Simplicity
185 purification system from Millipore.The ionic strength of
vimentin solutions was adjusted by the addition
of sodium chloride, and the pH of the solution was regulated by the
addition of hydrochloric acid (3.5–4), PBS (pH 7.4), and sodium
hydroxide (pH 8–10).The mica plates supplied from Continental
Trade were used as a
solid support for vimentin adsorption. The thin samples of mica were
directly cleaved before each experiment. Additionally, in vimentin
corona formation experiments, sulfonate polystyrene particles (negatively
charged and referred to as S800), products synthesized in our laboratory
in accordance with the Goodwin procedure,[27] served as colloid carriers.The electrophoretic mobility of
the microparticles, without and
with the protein corona, was determined using the laser Doppler velocimetry
(LDV) using the Zetasizer Nano ZS instrument from Malvern.The
quartz microbalance (QCM) was used to determine the kinetics
of vimentin adsorption. The gravimetric measurements were performed
with the use of a Q-Sense E1 system (Q-Sense, Gothenburg, Sweden)
in accordance with the standard protocol described in ref (28). The experimental runs
were initiated after reaching a stable baseline for the pure electrolyte.
The flow of the electrolyte was set up for 2.5 × 10–3 cm3 s–1. Subsequently, the vimentin
solution with the desired concentration (typically 5 mg L–1) was passed through the cell. After attaining a desired coverage,
the protein layer was flushed with the pure electrolyte in order to
determine its stability. In order to calculate the adsorbed vimentin
mass per unit area (coverage), the Sauerbrey equation was used[29]where ΓQ is the mass coverage, CQ is the mass (coverage) sensitivity constant
equal to 0.177 mg m–2 Hz–1 for
the 5 MHz AT-cut quartz sensor, Δf is the frequency
change, and no is the overtone number.In the AFM study, the mica sheets were submerged in a low concentration
solution of vimentin (0.5 mg L–1). The adsorption
process took place under thermostated conditions under the diffusion-controlled
transport for 10–180 min. The mica sheets with adsorbed molecules
were rinsed using ultrapure water for 30 s. The vimentin layers were
subsequently imaged using the NT-MDT Solver AFM with SMENA—B
scanning head working in air. The silicon AFM probes (polysilicon
cantilevers, ETALON) with nominal resonance frequencies ranging from
77 to 114 kHz and a radius of curvature equal to 10 nm were used.
Randomly chosen scan areas of 2.0 μm × 2.0 μm were
imaged over each sample with up to 20 different locations, reaching
the relative precision of 5%. The temperature through the measurements
was constant and kept to be equal to 298 K.
Characteristics of Substrates
Thorough physicochemical
characteristics of mica and silica sensors used in investigations
of vimentin adsorption kinetics were carried out using AFM (surface
topography) and electrokinetic measurements (for details consult the Supporting Information section). Thus, the rms
for mica sheets determined by AFM was below or equal to 0.1 nm, whereas
for the QCM sensors, it was equal to 0.8 nm.Detailed characterizations
of the polymer particles used as carriers in the vimentin corona formation
experiments were performed using DLS (diffusion coefficient) and the
LDV measurements (electrophoretic mobility). Using these experimental
data, the hydrodynamic diameter of particles was calculated using
the Stokes–Einstein formula and the zeta potential using the
Smoluchowski–Henry relationship. Independently, laser diffractometry
and AFM imaging were used to determine the size of the particles.
It was equal to 820 ± 20 nm. The zeta potential of particles
was equal to −70 and −90 mV at pH 3.5 and 7.4, respectively
(for an ionic strength of 0.01 M). Dependencies of the zeta potential
of these polymer carriers on pH are graphically shown in the Supporting Information.
Results and Discussion
Vimentin Adsorption Kinetics—AFM Measurements
Vimentin adsorption kinetics at mica under diffusion transport was
determined by the AFM method, similarly to previously published fibrinogen[30] and human serum albumin[31] data. Because of the molecularly smooth and homogeneous surface
properties of mica, this method allows to determine the shape, 3-D
topography, and surface concentration of molecules. In order to minimize
protein aggregation during the adsorption, such investigations are
performed at low protein concentrations, usually below 1 mg L–1. The experiments were performed at pH 3.5 and 1 and
10 mM NaCl, where the molecules are expected to bear a positive charge,
given that their isoelectric point is equal to ca. 4.9.[32] Typical AFM micrographs of vimentin aggregates
at mica taken under these conditions are shown in Figure . One can observe that the
average distance between vimentin aggregates is much larger than their
dimensions, which enables us to determine their size and surface concentration.
Figure 1
Vimentin
layers at mica (AFM micrographs); adsorption conditions:
pH = 3.5, cb = 0.5 mg L–1, t = 15 min. (a) 0.001 M NaCl and (b) 0.01 M NaCl.
Vimentin
layers at mica (AFM micrographs); adsorption conditions:
pH = 3.5, cb = 0.5 mg L–1, t = 15 min. (a) 0.001 M NaCl and (b) 0.01 M NaCl.A qualitative analysis of these micrographs indicates
that the
aggregates exhibit a regular quasi-spherical shape with a relatively
small size spread. No elongated aggregates or filaments were observed
in these micrographs. Quantitatively, the size distribution of aggregates
was determined by measuring their dimensions in two perpendicular
directions and taking an average value. The size histograms obtained
in this way considering ca. 100 individual aggregates are shown in Figure . It was established
that the average size of vimentin aggregates was 12 ± 2 and 11
± 1 nm for 1 and 10 mM NaCl concentration, respectively. It is
worth mentioning that these values are close to the diameter of intermediate
filaments reported in the literature.[17−19] It would be interesting
to compare these aggregate sizes with that pertinent to the vimentin
molecule monomer, which is, unfortunately, not available from experimental
measurements. However, one can quite accurately estimate its size
assuming that the monomer molar mass denoted by M1 is equal to 53.5 kg mol–1 (kDa).[15,24,33] Thus, the volume of the monomer
can be calculated from the dependencewhere Av is the Avogadro
number (6.02 × 1023) and ρ1 is the
vimentin monomer density.
Figure 2
Histograms of vimentin aggregate size determined
by AFM. (a) 0.001
M NaCl, average aggregate size 12 ± 2 nm, and (b) 0.01 M NaCl,
average aggregate size 11 ± 1 nm.
Taking the density value pertinent
to globular proteins [e.g.,
human serum albumin (HSA)] equal to 1.36 g cm–3,[34] one obtains from eq that v1 = 65.3
nm3. The equivalent sphere diameter can be calculated asIt is equal to 5.0 nm, which is an
estimate of the real size of
the vimentin monomer if its shape is approximated by a sphere.Having the value of d1, it is possible
to determine the characteristic cross-section of the monomer Sg = πd12/4 = 20 nm2, and its diffusion coefficient of 9.8 × 10–11 m2 s–1 (see Table ).
Table 1
Physicochemical Parameters of the
Vimentin Molecule Monomera
property,
symbol unit
value
remarks
molar mass, monomer, M1, kg mol–1 [kDa]
53.5
from primary
molecule structure[15]
density, ρp, kg m–3
1.36 × 103
estimated
specific volume, monomer, v1, nm3
65.3
calculated from molar mass
and density, see footnotes
equivalent sphere (hydrodynamic)
diameter, d1, nm
5.0
see footnotes
diffusion coefficient of
the equivalent sphere (monomer), D1, m2 s–1
9.8 × 10–11
see footnotes, T = 298 K
geometrical cross-section of the equivalent sphere, Sg1, nm2
v1 = M1/ρpAv; d1 = (6v1/π)1/3; D1 = kT/3πηd1; Sg = πd12/4.Comparing the monomer size with the average aggregate
size determined
from AFM, which is approximately 2 times larger, one may expect that
they are composed of at least four vimentin monomers. Indeed, the
dimensions of the tetramer forming a regular structure (see Table ) are 10 × 10
nm with the diagonal equal to 14 nm, which results in an average diameter
equal to 12 nm. This matches the experimental value within error bounds.
On the other hand, for the hexagonal arrangement of four monomers,
one obtains 10 × 13.7 nm as the aggregate dimensions. It should
be mentioned that the presence of tetramers in vimentin solutions
at low ionic strength was predicted and experimentally confirmed in
previous investigations.[18,25]
Table 2
Physicochemical Characteristics of
Vimentin Aggregatesa
dH—hydrodynamic
diameter, D—diffusion coefficient, Sg∥—cross-sectional area for the
side-on adsorption, Sg⊥—cross-sectional
area for the end-on adsorption, Γ∞∥—maximum coverage for the side-on adsorption, Γ∞⊥—maximum coverage for the end-on adsorption,
and na—aggregation number
dH—hydrodynamic
diameter, D—diffusion coefficient, Sg∥—cross-sectional area for the
side-on adsorption, Sg⊥—cross-sectional
area for the end-on adsorption, Γ∞∥—maximum coverage for the side-on adsorption, Γ∞⊥—maximum coverage for the end-on adsorption,
and na—aggregation numberHowever, the analysis of aggregate sizes alone cannot
unequivocally
furnish the number of monomers they are composed of. This information
can be acquired from measurements of protein adsorption kinetics performed
in accordance with the protocol described in Materials
and Methods using AFM under diffusion transport and QCM under
convection-driven transport. The AFM measurements are especially useful
because they directly yield the surface concentration expressed by Na as a function of the adsorption time for various
protein concentrations in the bulk and pHs. The surface concentration
is connected with the aggregation number through the formula[35]where na is the
aggregation number (thus, Ma = naM1 is the aggregate
molar mass), Da is the aggregate diffusion
coefficient, and cb denotes the mass concentration
of the vimentin solution.The validity of eq for a broad range of time was confirmed by
performing numerical
calculations of the exact transport equation with the blocking function
stemming from the random sequential adsorption model (Supporting Information).It is worth noticing
that the rate of aggregate adsorption normalized
to the monomer rate decreases as 1/na(Da/D1)1/2 = 1/na(dH1/dHa)1/2, where dHa is the hydrodynamic diameter of the aggregate depending
on their shape and dH1 is the hydrodynamic
diameter of the monomer equal to 5.0 nm as calculated above. Values
of hydrodynamic diameters for various aggregates numerically calculated
are collected in Table . Thus, for the tetramer, one obtains 9.3 (hexagonal) to 10 (regular)
nm, for the hexamer, 11 nm, and for the octamer 12 nm. As can be noticed,
the hydrodynamic diameters only slightly depend on the aggregate size
and shape. This indicates that the difference in the adsorption kinetics
mainly stems from the aggregation number rather than from the change
in the diffusion coefficient, which confirms an adequate precision
of the kinetic method.In Figure , results
derived from these kinetic measurements are presented in the form
predicted by eq , that
is, as a function of Na/cb on t1/2, and compared with
theoretical results approximated for the monomer and for diverse aggregates
(1 ≤ na ≤ 8). As one can
see, the experimental results almost coincide with those theoretically
predicted for the hexamer whose molar mass is equal to 321 kg mol–1. It is worth mentioning that this result harmonizes
with that experimentally determined by Lopez et al.,[25] where the molar mass of the starting solution of vimentin
(determined by static light scattering) was equal to 330 kg mol–1. Moreover, it was shown that this value was fairly
constant upon performing aggregation experiments induced by the addition
of 10 mM KCl solution.
Figure 4
Kinetics of vimentin adsorption/desorption presented as
the dependence
of the coverage (calculated for the overtones 3, 5, 7, 9, and 11)
on the time; adsorption conditions pH 3.5, bulk protein concentration
5 mg L–1, flow rate 8.3 × 10–4 cm3 s–1; (a) NaCl electrolyte concentration
10 mM, (b) NaCl electrolyte concentration 150 mM. The inset shows
AFM micrographs of protein adsorbed at the QCM sensor after the adsorption
run.
Obviously, the aggregation number predicted
in the adsorption kinetic
experiments should be treated as an average value because one can,
for example, predict that an equal number of tetramers and octamers
could yield the aggregation number equal to six. However, a spontaneous
formation of vimentin aggregates indicates that the molecule charge
and hydrophobicity are heterogeneously distributed. Thus, it is expected
the inside part of aggregates is more hydrophobic and less charged
compared to the outside part exposed to the solution, which is a usual
phenomenon for ionic surfactants forming various micellar structures.[36] If this assumption was valid, the formation
of hexamers would be more probable, and as a result, their concentration
would exceed that of the tetramer concentration. However, considering
that our main goal was to determine the mechanism of vimentin monolayer
formation, this interesting issue is not further elaborated in this
work.
Vimentin Adsorption Kinetics—QCM Measurements
Vimentin adsorption kinetic measurements were performed applying
the quartz crystal microbalance (QCM) technique according to the protocol
previously applied for fibrinogen[37] and
HSA.[38,39] This method exhibits pronounced advantages
making possible real time, in situ measurements of adsorption/desorption
kinetics under various transport conditions (diffusion, flow). However,
one should mention that the analysis of QCM measurements is a demanding
task, because the oscillation frequency and the energy dissipation
signals depend on the force exerted on the sensor rather than on the
particle mass.[40,41] If one considers a rigid contact,
the net force includes the inertia component proportional to the particle
mass and the hydrodynamic component, which can play a significant
role. This effect is generally explained as the hydrodynamic solvent
coupling leading to apparent hydration of protein layers.[37,39,40]Typical QCM kinetic runs
acquired for pH 3.5 and two ionic strengths of 10 and 150 mM NaCl
are presented in Figure as the dependence of the protein coverage expressed in mg m–2 (calculated using the Sauerbrey equation for the
overtones 3, 5, 7, 9, and 11) on the adsorption time. It can be noticed
that for 10 mM NaCl, the coverage rapidly increases, attaining a maximum
value of 4.5 mg m–2 (for the third overtone) after
30 min of adsorption. During the desorption run, a minor decrease
in the coverage was noticed, which attained the stationary value of
4 mg m–2. A similar behavior was registered for
150 mM NaCl (Figure b) with a slightly larger vimentin coverage after the desorption
run equal to 5.5 mg m–2 (for the 3rd overtone).
For the 11th overtone, the stationary coverages were equal to 3.2
and 5 mg m–2, respectively (for the 10 and 150 mM
electrolyte concentrations).It is worth mentioning that in
the case of HSA (Mw 67 kg mol–1), the limiting QCM coverage
equals 1.7 and 2.7 mg m–2 for 10 and 150 mM NaCl
concentrations, respectively.[38] Considering
the solvent coupling effect, this corresponded to the dry coverage
equal to 0.7 and 1.4 mg m–2 for 10 and 150 mM NaCl
concentrations, respectively. Using the value of the hydration function
determined in ref (38) for albumin, one can predict that the dry coverage of vimentin (calculated
as an average from the 3rd and 11th overtones) is equal to 1.8 and
2.6 mg m–2 for 10 and 150 mM NaCl, respectively.
As can be noticed, these values fairly well agree with those theoretically
predicted for the side-on adsorption of the tetramer (see Table ). It should also
be mentioned that the increase in the protein coverage with the electrolyte
concentration can be attributed to the decreased range of the repulsive
electrostatic interactions among adsorbed molecules.[38,42,43] The side-on adsorption mechanism
was further confirmed by the topographical analysis of the vimentin
layers adsorbed on the silica sensors in the QCM cell (see the inset
in Figure ), quantitatively
characterized on the basis of the rms factor (Supporting Information). It was shown that the average thickness
of the aggregates was equal to 5.1 nm, which corresponds to the predicted
tetramer thickness.Analogous vimentin adsorption/desorption
kinetic experiments were
performed at pH 7.4, adjusted with the PBS buffer at ionic strengths
equal to 10 and 150 mM. The results shown in Figure a,b exhibit similar features as previously
observed at pH 3.5; that is, initially, the coverage rapidly increases,
attaining a maximum value of 9 mg m–2 (for the third
overtone) after 30 min of adsorption. During the desorption run, the
coverage decreases to 8.5 mg m–2. For the 11th overtone,
the stationary coverages were equal to 6.5 mg m–2, respectively. It is interesting to mention that in contrast to
pH 3.5, the differences in the stationary coverages between 10 and
150 mM ionic strength were much smaller, within experimental error
bounds. Considering the solvent coupling effect as previously mentioned,
one can predict that the dry coverage of vimentin (calculated as an
average from 3rd and 11th overtones) at pH 7.4 is equal to 3.7 mg
m–2 for ionic strength in the range of 10 to 150
mM. As can be noticed, this maximum coverage is larger than that determined
at pH 3.5 and agrees with theoretically predicted for the end-on adsorption
of the hexamer (see Table ).
Figure 5
Kinetics of vimentin adsorption/desorption expressed as
the dependence
of the coverage (calculated using the Sauerbrey equation for various
overtones) on the deposition time; adsorption conditions: pH 7.4,
bulk protein concentration 5 mg L–1, flow rate:
8.3 × 10–4 cm3 s–1. (a) pH 7.4, I = 10 mM, (b) pH 7.4 (PBS), I = 150 mM. The inset shows AFM micrographs of vimentin
layers at the silica sensor after the adsorption run.
The AFM and the in situ QCM kinetic results shown
in Figures –5 confirm efficient adsorption of vimentin
on the
negatively charged surfaces because the zeta potential of mica and
silica at pH 7.4 and 10 mM ionic strength was equal to −70
and −45 mV, respectively. This indicates that there exist positive
charge patches at vimentin aggregates at pH 7.4, whereas the average
aggregate charge is negative. Moreover, the end-on mechanism of the
adsorption suggests that the positive charge is placed at the perimeter
of the vimentin aggregates, whereas the inside part is negatively
charged. One can hypothesize that such heterogeneous charge distribution
can be responsible for the aggregation of vimentin, leading to various
fibril-like structures observed in previous works.[12−15,18,19]Histograms of vimentin aggregate size determined
by AFM. (a) 0.001
M NaCl, average aggregate size 12 ± 2 nm, and (b) 0.01 M NaCl,
average aggregate size 11 ± 1 nm.Normalized surface concentration of vimentin vs the square
root
of the time of adsorption t1/2. The points
express experimental results achieved from AFM (adsorption conditions
pH = 3.5 (● red), and 7.4 (● blue), 10 mM NaCl, bulk
protein concentration c = 0.5–1 mg L–1. The black lines display
the theoretical results obtained by numerical solution of the diffusion
transport equation for 1—the monomer, 4—the tetramer,
6—the hexamer, and 8—the compact octamer.Kinetics of vimentin adsorption/desorption presented as
the dependence
of the coverage (calculated for the overtones 3, 5, 7, 9, and 11)
on the time; adsorption conditions pH 3.5, bulk protein concentration
5 mg L–1, flow rate 8.3 × 10–4 cm3 s–1; (a) NaCl electrolyte concentration
10 mM, (b) NaCl electrolyte concentration 150 mM. The inset shows
AFM micrographs of protein adsorbed at the QCM sensor after the adsorption
run.Kinetics of vimentin adsorption/desorption expressed as
the dependence
of the coverage (calculated using the Sauerbrey equation for various
overtones) on the deposition time; adsorption conditions: pH 7.4,
bulk protein concentration 5 mg L–1, flow rate:
8.3 × 10–4 cm3 s–1. (a) pH 7.4, I = 10 mM, (b) pH 7.4 (PBS), I = 150 mM. The inset shows AFM micrographs of vimentin
layers at the silica sensor after the adsorption run.It should also be mentioned that such a heterogeneous
charge distribution
was confirmed for the fibrinogen molecule, performing theoretical
modeling, solution viscosity,[44] streaming
potential,[30] and adsorption kinetics measurements.[45]More information about the charge distribution
over vimentin aggregates
can be derived by applying electrokinetic methods, primarily the LDV
involving polymer carrier particles of well-defined and homogeneous
charge distribution. The results of these experiments are discussed
in the next section.
Vimentin Corona Formation at Polymer Particles
Adsorption
of vimentin at negatively charged S800 particles, referred later to
as corona formation in accordance with commonly used nomenclature,[46,47] was performed according to the following procedure. Equivalent volumes
of the vimentin solution with a concentration ranging from 0.2 to
2 mg L–1 and the S800 particle suspensions of the
concentration equal to 50 or 100 mg L–1 were mixed
over 15 min. In separate experiments, it was confirmed that such mixing
time was adequate for full corona formation, in accordance with the
theoretical prediction of the relaxation time of this process given
in the Supporting Information. After finishing
an adsorption run, the electrophoretic mobility of the microparticles
with the corona was measured by the LDV and the corresponding zeta
potential was calculated using the Smoluchowski equation. Primarily
in these experiments, the dependence of the zeta potential of the
particles on the vimentin bulk concentration was determined. In order
to facilitate their quantitative interpretation, the nominal corona
coverage Γ was calculated using the mass balance equation[47−49]where ρp is the polymer particle
density, dp is the particle diameter,
and cp is the particle concentration in
the bulk.In Figure , the dependence of the zeta potential of the vimentin corona
on the nominal coverage calculated from eq obtained at pH 3.5 and in a 10 mM electrolyte
is shown. It can be observed that the initially negative zeta potential
rapidly increases with the vimentin coverage and becomes positive
for a Γ larger than 2 mg m–2. However, for
still larger coverages, the change in the zeta potential becomes rather
minor, and finally, a plateau value equal to 10 mV is attained. The
primary experimental data presented in Figure were theoretically analyzed using the electrokinetic
model formulated in ref (50). This enabled us to formulate the following formula for
the zeta potential of the protein corona at polymer particles ζ(Θ)where Θ is the absolute (dimensionless)
coverage of protein molecules calculated from the formulaSg is the characteristic
cross-sectional area of the vimentin molecule aggregate (see Table ), ζ is the zeta potential of carrier particles, ζ is the bulk protein zeta potential, and F(Θ) and Fp(Θ) are the dimensionless functions. The F function describes the damping
of the flow near the particle surface by the adsorbed molecule layer,
and the Fp function characterizes the
contribution to the zeta potential stemming from the molecules.[50]
Figure 6
Dependence of the zeta potential of vimentin at negatively
charged
polymer particles (S800) on the nominal protein coverage calculated
from eq ; adsorption
conditions: pH 3.5 and 10 mM NaCl. The points denote experimental
results obtained from the LDV measurements, and the red line shows
the theoretical results predicted from the electrokinetic model using eq .
Dependence of the zeta potential of vimentin at negatively
charged
polymer particles (S800) on the nominal protein coverage calculated
from eq ; adsorption
conditions: pH 3.5 and 10 mM NaCl. The points denote experimental
results obtained from the LDV measurements, and the red line shows
the theoretical results predicted from the electrokinetic model using eq .The results obtained from eqs and 7 for the hexamer
using the molar
mass and geometrical cross-section areas given in Table are presented as a red line
in Figure . As one
can observe, they appropriately reflect the experimental run, indicating
that the maximum coverage is equal to 3.0 mg m–2, which agrees with the theoretical value predicted for the hexamer
adsorbing side-on. To increase the precision of the maximum coverage
determination, a concentration depletion method exploiting AFM was
used.[51] This procedure gives the remaining
concentration of vimentin in the solution after the adsorption on
the particles. Knowing the initial and the residual concentration,
the true coverage of adsorbed vimentin can be calculated from eq . Thus, we obtained 2.6
mg m–2, which is smaller than the above value probably
due to the desorption of vimentin molecules during the application
of the concentration depletion method, analogously as observed in
the QCM runs.Analogous measurements of vimentin corona formation
at pH 7.4 are
plotted in Figure . One can observe that the initially negative zeta potential of particles
rapidly increases with the coverage and stabilizes at the value equal
to −35 and −12 mV for 10 and 150 mM electrolyte concentrations,
respectively. As before, the experimental results presented in Figure are adequately interpreted
using the electrokinetic model, where the zeta potential of the vimentin
corona is calculated from eqs and 7 for the hexamer and for the 10
and 150 mM electrolyte concentration, respectively. The maximum coverage
equals ca. 3.5 mg m–2, which is in agreement with
the theoretical value predicted for the hexamer adsorbing side-on
and with the previous value obtained from QCM measurements.
Figure 7
Dependencies
of the zeta potential of vimentin at negatively charged
polymer particles (S800) on the nominal protein coverage calculated
from eq ; adsorption
conditions: pH 7.4 (PBS); (a) 10 mM ionic strength and (b) 150 mM
ionic strength. The black points denote experimental results obtained
from the LDV measurements, and the red lines show the theoretical
results calculated from the electrokinetic model using eq .
Dependencies
of the zeta potential of vimentin at negatively charged
polymer particles (S800) on the nominal protein coverage calculated
from eq ; adsorption
conditions: pH 7.4 (PBS); (a) 10 mM ionic strength and (b) 150 mM
ionic strength. The black points denote experimental results obtained
from the LDV measurements, and the red lines show the theoretical
results calculated from the electrokinetic model using eq .It was also determined that the particle suspensions
with vimentin
coronas were stable longer than 24 h which facilitated determining
their electrophoretic mobility and, in consequence, their zeta potential
as a function of pH using the Smoluchowski equation. The results of
such measurements, performed for the corona adsorbed at pH 3.5 with
the coverage of 3 mg m–2, are shown in Figure . As one can notice,
the zeta potential of the particles becomes negative at a pH larger
than 4, and then it attains the value of −37 mV, which remains
stable for a pH up to 10. If the zeta potential of the particles with
the vimentin corona is known, one can calculate the bulk zeta potential
of vimentin aggregates by rearranging eq to the resulting form
Figure 8
Dependence of the zeta potential of S800 particles
with vimentin
corona on the coverage equal to 3 mg m–2 on pH;
the points show experimental data obtained using the LDV method for
10 mM NaCl, (● red)—pH increase; (● blue)—pH
decrease, interpolated by the dashed line. The solid (1) line represents
the bulk aggregate zeta potential calculated from eq .
Dependence of the zeta potential of S800 particles
with vimentin
corona on the coverage equal to 3 mg m–2 on pH;
the points show experimental data obtained using the LDV method for
10 mM NaCl, (● red)—pH increase; (● blue)—pH
decrease, interpolated by the dashed line. The solid (1) line represents
the bulk aggregate zeta potential calculated from eq .Considering that for the large corona coverage,
the F(Θ) function
vanishes and the Fp(Θ) function
reaches 0.71,[51] one can predict that ζp = 1.4ζ(Θ).The results calculated from eq and shown as a blue line
in Figure indicate
that the zeta potential of aggregates
varies between 15 mV at pH 3.5 to −52 mV at pH 7.4 (PBS). One
should mention that the determination of the vimentin aggregate zeta
potential is impractical using LDV because this would require protein
concentration in the bulk of about 500 mg L–l, resulting
in instability of the solution.The zeta potential determined
in this way can also be used to establish
the net electrokinetic charge of aggregates as a function of pH from
the following dependence[52]where ε is the permittivity of the electrolyte
and κ–1 is the thickness of the electric double
layer.Using eq the number
of elementary charges per single aggregate can be calculated. It was
equal to 22 and −63 for pH 3.5 and 7.4, respectively, which
corresponds to the surface charge of 0.17 and −0.7 e nm–2, respectively. The latter value is similar to that
reported in ref (53) for vimentin fibrils. It is to remember, however, that at pH 7.4,
a significant amount of positive charge is predicted from the above
deposition kinetic measurements, although, at present, it cannot be
quantified.The results obtained in this work confirm that it
is feasible to
fabricate stable particle suspensions with a vimentin corona of a
desired coverage and zeta potential only using 0.1 nM quantities of
the protein. Such layers can be exploited for investigating interactions
with various macromolecule ligands.
Conclusions
The AFM investigations of vimentin adsorption
at mica provided
reliable data about its basic physicochemical properties. It was established
that vimentin in solution at pH 3.5 and 7.4 mainly consists of aggregates
in the form of compact tetramers and hexamers having a size equal
to 11–12 nm that agrees with the cross-sectional diameter of
intermediate vimentin filaments reported in the literature.These results were confirmed by vimentin adsorption measurements
at planar surfaces carried out using QCM and at polymer particles,
leading to corona formation studied by the LDV method. In both cases,
it was established that the aggregates efficiently adsorb at negatively
charged silica sensors and polymer particles, both at pH 3.5 and 7.4,
forming compact layers of maximum coverage up to 3.5 mg m–2. One can, therefore, argue that the charge distribution over vimentin
aggregates at pH 7.4 is heterogeneous, with positive charge patches
located at the perimeter of the aggregates, whereas the inside part
remains negatively charged. It is hypothesized that such heterogeneous
charge distribution can promote the formation of various fibril-like
vimentin structures observed in previous works.[17−26]It was also shown that a quantitative interpretation of vimentin
corona formation at polymer particles is feasible in terms of the
electrokinetic model. The dependence of the corona zeta potential
on the coverage acquired in this way can be exploited to develop a
robust procedure for preparing functionalized particles with controlled
corona density. The particles can be used for investigations of vimentin
molecule interactions with various ligands comprising immunoglobulins,
bacteria virulence factors, and spike proteins of viruses.
Authors: Craig Stevens; Paul Henderson; Elaine R Nimmo; Dinesh C Soares; Belgin Dogan; Kenneth W Simpson; Jeffrey C Barrett; David C Wilson; Jack Satsangi Journal: Gut Date: 2012-06-08 Impact factor: 23.059