Literature DB >> 9000622

Structure and assembly properties of the intermediate filament protein vimentin: the role of its head, rod and tail domains.

H Herrmann1, M Häner, M Brettel, S A Müller, K N Goldie, B Fedtke, A Lustig, W W Franke, U Aebi.   

Abstract

We have investigated the functional role of the non-helical end domains of vimentin on its assembly properties using truncated Xenopus and human recombinant proteins. Removal of the amino-terminal "head" domain yielded a molecule that did not assemble into 10 nm filaments but remained in a soluble oligomeric particle form with a sedimentation coefficient considerably smaller than that of wild-type vimentin (Vim(wt)). In contrast, removal of the carboxy-terminal "tail" domain had no obvious effect on the sedimentation characteristics. In particular, sedimentation equilibrium analysis under low ionic strength conditions yielded oligomeric particle species of Mr 135,000 to 360,000, indistinguishable from those obtained with Vim(wt). When induced to form filaments from this state by rapid dilution into filament forming buffer, Vim(wt) and Vim(deltaT) protein generated similar viscosity profiles. However, as determined by scanning transmission electron microscopy, under these conditions Vim(deltaT) formed filaments of heterogeneous diameter, corresponding to various distinct mass-per-length (MPL) values: whereas Vim(wt) yielded MPL values peaking between 40 and 45 kDa/nm, Vim(deltaT) filaments produced histograms which could be fitted by three Gaussian curves peaking between 37 and 131 kDa/nm. In contrast, when dialyzed against, instead of being rapidly diluted into, filament forming buffer, Vim(deltaT) gave histograms with one major peak at about 54 kDa/nm. The MPL heterogeneity observed for Vim(deltaT) was already evident at the earliest stages of assembly. For example, ten seconds after initiation, "unit-length" filament segments (58 to 63 nm) were formed with both wt and deltaT proteins, but the diameters were considerably larger for Vim(deltaT) compared to Vim(wt) (20(+/- 3) nm versus 16(+/- 3)nm), indicating a distinct role of the carboxy-terminal tail domain in the width control during unit-length filament formation. Despite this difference both Vim(deltaT) and Vim(wt) filaments appeared to grow stepwise in a modular fashion from such unit-length filament segments. This suggests that assembly occurred by a principally similar mechanism involving the end-on-fusion or annealing of unit-length filaments.

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Year:  1996        PMID: 9000622     DOI: 10.1006/jmbi.1996.0688

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  105 in total

1.  Conserved segments 1A and 2B of the intermediate filament dimer: their atomic structures and role in filament assembly.

Authors:  Sergei V Strelkov; Harald Herrmann; Norbert Geisler; Tatjana Wedig; Ralf Zimbelmann; Ueli Aebi; Peter Burkhard
Journal:  EMBO J       Date:  2002-03-15       Impact factor: 11.598

2.  Nestin promotes the phosphorylation-dependent disassembly of vimentin intermediate filaments during mitosis.

Authors:  Ying-Hao Chou; Satya Khuon; Harald Herrmann; Robert D Goldman
Journal:  Mol Biol Cell       Date:  2003-04       Impact factor: 4.138

3.  The 3' untranslated region of human vimentin mRNA interacts with protein complexes containing eEF-1gamma and HAX-1.

Authors:  May Al-Maghrebi; Hervé Brulé; Marina Padkina; Carrie Allen; W Michael Holmes; Zendra E Zehner
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

4.  The intermediate filament architecture as determined by X-ray diffraction modeling of hard alpha-keratin.

Authors:  Meriem Er Rafik; Jean Doucet; Fatma Briki
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

5.  Cleavage of host keratin 8 by a Chlamydia-secreted protease.

Authors:  Feng Dong; Heng Su; Yanqing Huang; Youmin Zhong; Guangming Zhong
Journal:  Infect Immun       Date:  2004-07       Impact factor: 3.441

6.  Structural characterization of human vimentin rod 1 and the sequencing of assembly steps in intermediate filament formation in vitro using site-directed spin labeling and electron paramagnetic resonance.

Authors:  John F Hess; Madhu S Budamagunta; John C Voss; Paul G FitzGerald
Journal:  J Biol Chem       Date:  2004-07-01       Impact factor: 5.157

7.  The structure of vimentin linker 1 and rod 1B domains characterized by site-directed spin-labeling electron paramagnetic resonance (SDSL-EPR) and X-ray crystallography.

Authors:  Atya Aziz; John F Hess; Madhu S Budamagunta; John C Voss; Alexandre P Kuzin; Yuanpeng J Huang; Rong Xiao; Gaetano T Montelione; Paul G FitzGerald; John F Hunt
Journal:  J Biol Chem       Date:  2012-06-26       Impact factor: 5.157

8.  Site-directed spin labeling and electron paramagnetic resonance determination of vimentin head domain structure.

Authors:  Atya Aziz; John F Hess; Madhu S Budamagunta; John C Voss; Paul G FitzGerald
Journal:  J Biol Chem       Date:  2010-03-15       Impact factor: 5.157

Review 9.  Amyloid structure and assembly: insights from scanning transmission electron microscopy.

Authors:  Claire Goldsbury; Ulrich Baxa; Martha N Simon; Alasdair C Steven; Andreas Engel; Joseph S Wall; Ueli Aebi; Shirley A Müller
Journal:  J Struct Biol       Date:  2010-09-22       Impact factor: 2.867

10.  Assembly Kinetics of Vimentin Tetramers to Unit-Length Filaments: A Stopped-Flow Study.

Authors:  Norbert Mücke; Lara Kämmerer; Stefan Winheim; Robert Kirmse; Jan Krieger; Maria Mildenberger; Jochen Baßler; Ed Hurt; Wolfgang H Goldmann; Ueli Aebi; Katalin Toth; Jörg Langowski; Harald Herrmann
Journal:  Biophys J       Date:  2018-05-10       Impact factor: 4.033

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