Literature DB >> 35821474

Design of an Intron-Retained Bioluminescence Reporter and its Application in Imaging of Pre-mRNA Splicing in Living Subjects.

Fu Wang1,2,3, Si Chen4, Haifeng Zheng4, Bin Guo4.   

Abstract

Aberrant splicing of precursor messenger RNA (pre-mRNA) can generate abnormal transcripts, and most of the human diseases have been shown to associate with abnormal splicing of pre-mRNA. Conventional methods require sample lysis and thus cannot be used for monitoring pre-mRNA splicing in real time. This chapter guides how to develop an intron-retained bioluminescence (BL) reporter, which simulates the splicing process of pre-mRNA in vitro and in vivo noninvasively. In the following, we illustrate the design and construction of RLuc-intron and the methods of BL experiments in vitro and in vivo. The exemplified results show that our reporter is suitable for high-throughput screening of splicing inhibitors for the therapies of the diseases caused by aberrant splicing.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Bioluminescence reporter; Imaging; Intron-retained transcript; Pre-mRNA splicing; Renilla luciferase

Mesh:

Substances:

Year:  2022        PMID: 35821474     DOI: 10.1007/978-1-0716-2453-1_16

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  10 in total

1.  A screening method tuned for mRNA processing factors in human cells by evaluation of the luciferase reporter activity and the subcellular distribution of bulk poly(A)+ RNA.

Authors:  Naoko Fujiwara; Mayu Yoshikawa; Tomohiro Yamazaki; Taiho Kambe; Masaya Nagao; Seiji Masuda
Journal:  Biosci Biotechnol Biochem       Date:  2010-07-07       Impact factor: 2.043

Review 2.  Global analysis of mRNA splicing.

Authors:  Michael J Moore; Pamela A Silver
Journal:  RNA       Date:  2007-12-14       Impact factor: 4.942

Review 3.  A day in the life of the spliceosome.

Authors:  A Gregory Matera; Zefeng Wang
Journal:  Nat Rev Mol Cell Biol       Date:  2014-02       Impact factor: 94.444

Review 4.  In Vivo Molecular Bioluminescence Imaging: New Tools and Applications.

Authors:  Laura Mezzanotte; Moniek van 't Root; Hacer Karatas; Elena A Goun; Clemens W G M Löwik
Journal:  Trends Biotechnol       Date:  2017-05-10       Impact factor: 19.536

5.  Biological validation that SF3b is a target of the antitumor macrolide pladienolide.

Authors:  Akira Yokoi; Yoshihiko Kotake; Kentaro Takahashi; Tadashi Kadowaki; Yoshiko Matsumoto; Yukinori Minoshima; Naoko H Sugi; Koji Sagane; Makoto Hamaguchi; Masao Iwata; Yoshiharu Mizui
Journal:  FEBS J       Date:  2011-10-31       Impact factor: 5.542

6.  Quantitative imaging of single mRNA splice variants in living cells.

Authors:  Kyuwan Lee; Yi Cui; Luke P Lee; Joseph Irudayaraj
Journal:  Nat Nanotechnol       Date:  2014-04-20       Impact factor: 39.213

Review 7.  Splicing in disease: disruption of the splicing code and the decoding machinery.

Authors:  Guey-Shin Wang; Thomas A Cooper
Journal:  Nat Rev Genet       Date:  2007-08-29       Impact factor: 53.242

8.  Splicing factor SF3b as a target of the antitumor natural product pladienolide.

Authors:  Yoshihiko Kotake; Koji Sagane; Takashi Owa; Yuko Mimori-Kiyosue; Hajime Shimizu; Mai Uesugi; Yasushi Ishihama; Masao Iwata; Yoshiharu Mizui
Journal:  Nat Chem Biol       Date:  2007-07-22       Impact factor: 15.040

9.  A novel occluded RNA recognition motif in Prp24 unwinds the U6 RNA internal stem loop.

Authors:  Stephen Martin-Tumasz; Ashley C Richie; Lawrence J Clos; David A Brow; Samuel E Butcher
Journal:  Nucleic Acids Res       Date:  2011-06-07       Impact factor: 16.971

10.  Somatostatin receptor type 2 as a radiotheranostic PET reporter gene for oncologic interventions.

Authors:  Pedram Heidari; Anchisa Kunawudhi; Jordi Martinez-Quintanilla; Alicia Szretter; Khalid Shah; Umar Mahmood
Journal:  Theranostics       Date:  2018-05-23       Impact factor: 11.556

  10 in total

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