| Literature DB >> 35808924 |
Ming Jiang1, Yelong Wang2, Jing Wang1, Shanwu Feng1, Xian Wang1.
Abstract
BACKGROUND: Non-coding RNAs (ncRNAs) are involved in neuropathic pain development. Herein, we systematically searched for neuropathic pain-related ncRNAs expression changes, including microRNAs (miRNAs), long non-coding RNAs (lncRNAs), and circular non-coding RNAs (circRNAs).Entities:
Keywords: circRNAs; lncRNAs; mechanism study; miRNAs; neuropathic pain
Mesh:
Substances:
Year: 2022 PMID: 35808924 PMCID: PMC9396192 DOI: 10.1002/jcla.24592
Source DB: PubMed Journal: J Clin Lab Anal ISSN: 0887-8013 Impact factor: 3.124
FIGURE 1microRNAs (miRNAs) expression change following peripheral nerve injury or noxious stimuli SCI, spinal cord injury; CSF, cerebrol spinal fluid; DE, differential expressed; EV, extravascular vesicle; SNL, spinal nerve ligation; DRG, dorsal root ganglion; SNI, spared nerve injury; CCI, chronic constriction injury; DRT, DRG transection; VRT, ventral root transection
FIGURE 2Long non‐coding RNA (lncRNAs) and circular non‐coding RNAs (circRNAs) expression change following peripheral nerve injury or noxious stimuli DNP, diabetic neuropathic pain; SCI, spinal cord injury; SNL, spinal nerve ligation; DRG, dorsal root ganglion; SNI, spared nerve injury; CCI, chronic constriction injury
miRNAs expression change for the development of neuropathic pain
| Mechanism | miRNA | Target | Tissue | Model |
|---|---|---|---|---|
| Neuroinflammation | miR‐101 ↓ | NF‐κB ↑ | Serum and sural nerve | NP patients |
| miR‐124, −155 ↑ | SIRT1 ↓ | Serum | NP patients | |
| miR‐7a ↓ | NEFL/STAT3 ↑ | DRG | SNL rats | |
| miR‐590‐3p ↓ | RAP1A ↑ | DRG | Diabetic NP mice | |
| miR‐140 ↓ | S1PR1 ↑ | DRG | CCI rats | |
| miR‐144 ↓ | RASA1 ↑ | DRG | CCI mice | |
| miR‐130a‐3p ↓ | IGF‐1/IGF‐1R ↑ | Spinal cord | SCI rats | |
| miR‐378 ↓ | EZH2 ↑ | Spinal cord | CCI rats | |
| miR‐138 ↓ | TLR4/MIP‐1α/CCR1 ↑ | Spinal cord | pSNL rats | |
| miR‐15a/16 ↑ | GRK2 ↓ and p38 MAPK/NF‐κB ↑ | Spinal cord | CCI mice | |
| miR‐124 ↓ | GRK2 ↓ | Spinal cord microglia | SNI mice | |
| miR‐214‐3p ↓ | DNMT3a/CSF1/IL‐6 ↑ | Spinal cord astrocytes | SNL rats | |
| miR‐214 ↓ | Nav1.3/Bax ↑ | Spinal cord | SCI rats | |
| miR‐128 ↓ | p38 ↑ | Spinal cord | SCI rats | |
| miR‐128‐3p ↓ | ZEB1 ↑ | Spinal cord | CCI rats | |
| miR‐200b, −429 ↓ | ZEB1 ↑ | Spinal cord | CCI rats | |
| miR‐23a ↓ | CXCR4/TXNIP/NLRP3 ↑ | Spinal cord | pSNL mice | |
| miR‐155 ↓ | NOX2/ROS ↑ | Spinal cord microglia/macrophages | SCI mice | |
| TNFR1/p38‐MAPK/JNK/TRPA1 ↑ | Spinal cord dorsal horn | Chemotherapy induced NP rats | ||
| miR‐155 ↑ | SOCS1 ↓ and NF‐κB/p38 MAPK ↑ | Spinal cord | CCI rats | |
| Oxidative stress–TRPA1 pathway ↑ | Spinal cord | Chemotherapy induced NP rats | ||
| Autophagy | miR‐15a ↓ | AKT3 ↑ | Spinal cord microglia | CCI rats |
| miR‐145 ↓ | AKT3 ↑ | DRG | CCI rats | |
| miR‐20b‐5p ↓ | AKT3 ↑ | Dorsal spinal cord | CCI rats | |
| miR‐195 ↑ | ATG14 ↓ | Spinal cord microglia | SNL rats | |
| Ion channel expression | miR‐7a ↓ | β2 subunit of Scn2b ↑ | DRG | SNL and CCI rats |
| miR‐30b ↓ | Scn3a (encoding Nav1.3) ↑ | DRG and spinal cord | SNL rats | |
| miR‐96 ↓ | Scn3a (encoding Nav1.3) ↑ | DRG | CCI rats | |
| miR‐384‐5p ↓ | Scn3a (encoding Nav1.3) ↑ | DRG and spinal cord | CCI rats | |
| miR‐30b‐5p ↓ | Scn8a (encoding Nav1.6) ↑ | DRG | Chemotherapy induced NP rats | |
| miR‐182 ↓ | Scn9a (encoding Nav1.7) ↑ | DRG | SNI rats | |
| miR‐30b ↓ | Scn9a (encoding Nav1.7) ↑ | DRG | SNI rats | |
| miR‐17‐92 cluster ↑ |
Kv1.1, Kv1.4, Kv3.4, Kv4.3, Kv7.5, DPP10, Navβ1 ↓ | DRG | SNL rats | |
| miR‐137 ↑ | Kcna2 (encoding Kv1.2) ↓ | DRG and spinal dorsal horn | CCI rats | |
| miR‐183‐5p ↓ | TREK‐1 ↑ | DRG | CCI rats | |
| miR‐183 cluster ↓ | Cacna2d1/Cacna2d2 ↑ | DRG | SNL mice | |
| miR‐103 ↓ | Cacna1c/Cacna2d1/Cacnb1 ↑ | Spinal dorsal horn | SNL rats | |
| miR‐141‐5p ↓ | TRPA1 ↑ | DRG | Chemotherapy induced NP rats | |
| miR‐449a ↓ | TRPA1/KCNMA1 ↑ | DRG | SNI mice | |
| Dysregulation of pain‐related mediators, protein kinases, and structural proteins | miR‐455‐3p ↑ | NGF and related genes ↓ | Serum | HIV/AIDS patients with symptomatic distal sensory polyneuropathy and NP |
| miR‐1 ↓ | BDNF ↑ | Sciatic nerve | CCI rats | |
| miR‐183 ↓ | BDNF ↑ | DRG | SNL rats | |
| miR‐206 ↓ | BDNF ↑ | DRG | CCI rats | |
| miR‐19a, −301, −132 ↓ | MeCP2/BDNF ↑ | DRG | SNI mice | |
| miR‐30c‐5p ↑ | TGF‐β ↓ | Serum, CSF, DRG, and spinal cord | SNI rats | |
| miR‐133a‐3p ↑ |
p‐p38 MAPK ↑ | Sciatic nerve | DNP rats | |
| miR‐132 ↓ | MeCP2/p‐CREB ↑ | Spinal cord | SNI mice | |
| miR‐200b, −429 ↓ | DNMT3a ↑ | Nucleus accumbens neurons | SNL mice | |
| miR‐1 ↓ | Cx43 ↑ | Sciatic nerve | CCI rats | |
| miR‐15b ↑ | BACE1 ↓ | DRG | Chemotherapy induced NP rats | |
| Excitatory‐inhibitory imbalance | miR‐500 ↑ | GAD67 ↓ | Spinal cord dorsal horn | Chemotherapy induced NP or L5 VTR |
| miR‐23b ↓ | Nox4 ↑ and GAD65/67 ↓ | Spinal cord | SCI mice | |
| miR‐539 ↓ | NR2B ↑ | Contralateral ACC | CCI rats | |
| EV miRNA‐mediated neuron–glia communication | miR‐21 ↑ | Phagocyted by macrophages to promote a pro‐inflammatory phenotype | Serum exosomes | pSNL mice |
| miR‐21‐5p ↑ | Phagocyted by macrophages to promote a pro‐inflammatory phenotype | DRG exosomes | SNI mice | |
| miR‐23a ↑ | Phagocyted by macrophages to target A20 and enhance MI polarization | DRG EVs | SNI mice |
Abbreviations: ACC, anterior cingulate cortex; BACE1, beta‐site amyloid precursor protein‐cleaving enzyme 1; BDNF, brain‐derived neurotrophic factor; CCI, chronic constriction injury; CCR1, C–C chemokine receptor 1; CSF, cerebro spinal fluid; CSF1, colony‐stimulating factor‐1; CXCR4, chemokine CXC receptor 4; DNMT3a, DNA methyltransferase 3a; DNP, diabetic neuropathic pain; DRG, dorsal root ganglion; EV, extracellular vesicle; EZH2, enhancer of zeste homolog 2; GRK2, G protein‐coupled receptor kinases 2; IGF‐1/IGF‐1R, insulin‐like growth factor‐1/insulin‐like growth factor‐1 receptor; KCNMA1, calcium‐activated potassium channel subunit α‐1; MeCP2, methyl cytosine–guanine dinucleotide (CpG)‐binding protein 2; MIP‐1a, macrophage inflammatory protein‐1 alpha; NEFL, neurofilament light polypeptide; NF‐κB, nuclear factor – kappa B; NGF, nerve growth factor; NLRP3, NOD‐like receptor protein 3; NOX2, NADPH oxidase 2; NP, neuropathic pain; pSNL, partial sciatic nerve ligation; RAP1A, Ras‐related protein 1A; RASA1, RAS P21 protein activator 1; ROS, reactive oxygen species; S1PR1, sphingosine‐1‐phosphate receptor 1; SCI, spinal cord injury; Scn2b, β2 subunit of the voltage‐gated sodium channel; SIRT1, histone deacetylase sirtuin 1; SNL, spinal nerve ligation; SOCS1, suppressor of cytokine signaling 1; STAT3, signal transducer and activator of transcription 3; TLR4, toll‐like receptor 4; TNFR1, TNF receptor 1; TRPA1, transient receptor potential ankyrin 1; TXNIP, thioredoxin‐interacting protein; VTR, ventral root transection; ZEB1, zinc finger E‐box binding homeobox 1.
Long non‐coding RNAs (lncRNAs) and circular non‐coding RNAs (circRNAs) expression change for the development of neuropathic pain
| Mechanism | lncRNA | Mechanism | Tissue | Model |
|---|---|---|---|---|
| lncRNAs act as AS RNA | Egr2‐AS‐RNA ↑ | Egr2‐AS‐RNA inhibition delays peripheral myelination | Schwann cells | Sciatic nerve transection mice |
| Kcna2‐AS‐RNA ↑ ↑ | Kcna2‐AS‐RNA targets Kcna2 mRNA and reduces Kv current | DRG | SNL rats | |
| Scn9a NAT | NAT inhibits Scn9a mRNA and its encoding protein Nav1.7 and current | DRG | CCI mice | |
| lncRNAs act as miRNA sponges | XIST ↑ | Sponge miRNA‐137, −150, −154‐3p, −544 to disinhibit corresponding targets expression including TNFAIP1, ZEB1, TLR5, and STAT3 | Spinal cord | CCI rats |
| NEAT1 ↑ | Form NEAT1‐miR‐381‐HMGB1 axis to upregulate HMGB1 expression | Spinal cord | CCI rats | |
| Form NEAT1‐miR‐128‐3p‐AQP4 axis to upregulate AQP4 expression | Spinal cord | SCI rats | ||
| circHIPK3 ↑ | Form circHIPK3‐miR‐124 axis to promote neuroinflammation | DRG | NP rats | |
| ciRS‐7 ↑ | Form ciRS‐7‐miR‐135a‐5p axis to promote autophagy and inflammation | Spinal cord | CCI rats | |
| cirZNF609 ↑ | Form cirZNF609‐miR‐22‐3p‐ENO1 axis to promote neuroinflammation | Spinal cord | CCI rats | |
| circ_0005075 ↑ | Form circ_0005075‐miR‐151a‐3p‐NOTCH2 axis to promote neuroinflammation | Spinal cord | CCI rats | |
| lncRNAs regulate pain‐related molecules expression | DS‐lncRNA ↓ | DS‐lncRNA downregulation upregulates G9a, as well as downregulates G9a‐controlled opioid receptors and Kcna2 | DRG | SNL mice |
| uc.48+ ↑ | uc.48+ increases P2X3 receptor expression and ERK1/2 activation | DRG | DNP rats | |
| BC168687 ↑ | BC168687 increases P2X7 receptor expression, SGCs activation, and serum NO | DRG | DNP rats | |
| BC168687 ↑ | BC168687 increases TRPV1 expression | DRG | DNP rats | |
| NONARATT02197 ↑ | NONARATT02197 activates TNF‐a related pathway | DRG | DNP rats | |
| NONARATT02197 ↑ | NONARATT02197 increases P2X receptor expression | DRG | DNP rats | |
| NONARATT02197 ↑ | NONARATT02197 increases P2X7 receptor expression | DRG | DNP rats | |
| MRAK009713 ↑ | MRAK009713 increases P2X3 receptor expression | DRG | CCI rats | |
| Lncenc1 ↑ | Lncenc1 interacts with EZH2 and downregulates Bai1 expression in microglia | DRG | pSNL mice | |
| SNHG1 ↑ | SNHG1 targets CDK4 to induce neuroinflammation | Spinal cord | SNL rats | |
| PKIA‐AS1 ↑ | PKIA‐AS1 targets CDK6 to induce neuroinflammation | Spinal cord | SNL rats | |
| Kcna2‐AS‐RNA ↑ | It promotes pSTAT3 nucleus translocation and spinal cord neuroinflammation | Spinal cord | Postherpetic neuralgia rats | |
| lncRNAs modulate miRNA processing | uc.153 ↑ | uc.153 negatively modulates pre‐miR‐182‐5p processing and maturation, disinhibits EphB1 and p‐NR2B expression | Spinal cord | CCI mice |
Abbreviations: AQP4, aquaporin 4; AS RNA, antisense RNA; CCI, chronic constriction injury; CDK4, cyclin‐dependent kinase 4; CDK6, cyclin‐dependent kinase 6; DNP, diabetic neuropathic pain; DRG, dorsal root ganglion; ENO1, enolase 1; EphB1, ephrin type‐b 1; EZH2, enhancer of zeste homolog 2; HMGB1, high mobility group box 1; NAT, natural antisense transcript; NOTCH2, NOTCH receptor 2; NP, neuropathic pain; pSNL, partial sciatic nerve ligation; pSTAT3, phosphorylated signal transducer and activator of transcription 3; SCI, spinal cord injury; SGC, satellite glia cell; SNL, spinal nerve ligation; STAT3, signal transducer and activator of transcription 3; TLR5, toll‐like receptor 5; TNFAIP1, tumor necrosis factor alpha‐induced protein 1; TRPV1, transient receptor potential vanilloid 1; XIST, X‐inactive specific transcript; ZEB1, zinc finger E‐box binding homeobox 1.