| Literature DB >> 35798937 |
Kenichi Nakajima1, Shintaro Saito2, Zhuoqing Chen2, Junji Komatsu3, Koji Maruyama4,5, Naoki Shirasaki6, Satoru Watanabe7, Anri Inaki2, Kenjiro Ono3, Seigo Kinuya2.
Abstract
OBJECTIVES: 123I-ioflupane has been clinically applied to dopamine transporter imaging and visual interpretation assisted by region-of-interest (ROI)-based parameters. We aimed to build a multivariable model incorporating machine learning (ML) that could accurately differentiate abnormal profiles on 123I-ioflupane images and diagnose Parkinson syndrome or disease and dementia with Lewy bodies (PS/PD/DLB).Entities:
Keywords: Artificial intelligence; Dopamine transporter; Movement disorder; Neurodegenerative disease; Pattern recognition
Mesh:
Substances:
Year: 2022 PMID: 35798937 PMCID: PMC9304062 DOI: 10.1007/s12149-022-01759-z
Source DB: PubMed Journal: Ann Nucl Med ISSN: 0914-7187 Impact factor: 2.258
Demographics of training-validation and test data sets
| Training—validation data set | Test data set | |
|---|---|---|
| 137 | 102 | |
| Age | 75 ± 8 | 67 ± 15 |
| Sex (male) | 64 (47%) | 43 (42%) |
| PS/PD/DLB | 105 (77%) | 65 (64%) |
| PD | 35 (26%) | 20 (20%) |
| PS | 55 (40%) | 34 (33%) |
| DLB | 6 (4%) | 11 (11%) |
| PD or PS | 8 (6%) | 0 (0%) |
| PD or DLB | 1 (1%) | 0 (0%) |
| Non-PS/PD/DLB | 32 (23%) | 37 (36%) |
| Alzheimer disease | 1 (1%) | 2 (2%) |
| Essential tremor | 2 (2%) | 4 (4%) |
| Other diseases and/or unknown etiology | 29 (21%) | 31 (30%) |
| Low | 106 (77%) | 47 (46%) |
| Asymmetric | 82 (60%) | 38 (37%) |
| Dot-like | 88 (64%) | 48 (47%) |
| Abnormal | 108 (79%) | 42 (41%) |
DLB dementia with Lewy bodies, PD Parkinson disease, PS Parkinson syndrome
Fig. 1Processing data from DICOM image to automatic selection of striatal region
Fig. 2Determination of image features. Features of high or low, symmetric or asymmetric, and comma or dot, as well as overall impression of abnormality were determined
Fig. 3Three multivariable models. A Model 1: region of interest (ROI)-based calculation of specific binding ratio and asymmetry index. B Model 2: machine-learning-based direct judgement of abnormality. C Model 3: Logistic model combined with three features and age
Fourfold cross-validation of training data set for feature detection (n = 137)
| Features | AUC | Recall | Precision | F1 score | Accuracy | |
|---|---|---|---|---|---|---|
| LR | 0.96 | 0.94 | 0.71 | 0.81 | 0.90 | < 0.0001 |
| kNN | 0.96 | 0.84 | 0.79 | 0.81 | 0.91 | < 0.0001 |
| GBT | 0.95 | 0.97 | 0.61 | 0.75 | 0.85 | < 0.0001 |
| SBR | 0.92 | 0.97 | 0.64 | 0.77 | 0.87 | < 0.0001 |
| LR | 0.57 | 0.49 | 0.70 | 0.81 | 0.57 | 0.577 |
| kNN | 0.75 | 0.79 | 0.81 | 0.81 | 0.77 | < 0.0001 |
| GBT | 0.54 | 0.18 | 0.79 | 0.81 | 0.48 | 0.059 |
| Asymmetry index | 0.68 | 0.83 | 0.75 | 0.81 | 0.72 | 0.017 |
| LR | 0.91 | 0.86 | 0.95 | 0.91 | 0.88 | < 0.0001 |
| kNN | 0.91 | 0.88 | 0.90 | 0.89 | 0.85 | < 0.0001 |
| GBT | 0.94 | 0.82 | 0.97 | 0.89 | 0.87 | < 0.0001 |
| PC ratio | 0.85 | 0.74 | 0.92 | 0.82 | 0.79 | < 0.0001 |
| LR | 0.91 | 0.86 | 0.95 | 0.91 | 0.88 | < 0.0001 |
| kNN | 0.91 | 0.88 | 0.90 | 0.89 | 0.85 | < 0.0001 |
| GBT | 0.94 | 0.82 | 0.97 | 0.89 | 0.87 | < 0.0001 |
GBT gradient boosted tree, kNN k-nearest neighbor, LR logistic regression, PC putamen to caudate average count ratio, SBR specific binding ratio
Fig. 4Patients with essential tremor and dementia with Lewy bodies (DLB) and image features. Probabilities were calculated by machine learning (ML) for low, asymmetry, dot-like, and abnormal features and based on a combined model using forward stepwise method
Machine learning-based features and ROI-based parameters for feature detection in test data (n = 102)
| AUC | Recall | Precision | F1 score | Accuracy | ||
|---|---|---|---|---|---|---|
| LR | 0.95 | 1.00 | 0.67 | 0.80 | 0.85 | < 0.0001 |
| kNN | 0.95 | 1.00 | 0.67 | 0.80 | 0.85 | < 0.0001 |
| GBT | 0.94 | 0.90 | 0.77 | 0.83 | 0.89 | < 0.0001 |
| SBR | 0.96 | 1.00 | 0.67 | 0.80 | 0.85 | < 0.0001 |
| LR | 0.58 | 0.53 | 0.76 | 0.63 | 0.63 | 0.202 |
| kNN | 0.68 | 0.62 | 0.77 | 0.69 | 0.67 | 0.003 |
| GBT | 0.67 | 0.57 | 0.79 | 0.66 | 0.66 | 0.001 |
| Asymmetry index | 0.64 | 0.95 | 0.71 | 0.81 | 0.75 | < 0.0001 |
| LR | 0.92 | 0.73 | 0.98 | 0.84 | 0.81 | < 0.0001 |
| kNN | 0.79 | 0.71 | 0.89 | 0.79 | 0.76 | < 0.0001 |
| GBT | 0.88 | 0.83 | 0.93 | 0.88 | 0.84 | < 0.0001 |
| PC ratio | 0.81 | 0.65 | 0.88 | 0.75 | 0.72 | < 0.0001 |
| LR | 0.91 | 0.96 | 0.58 | 0.73 | 0.81 | < 0.0001 |
| kNN | 0.89 | 1.00 | 0.57 | 0.72 | 0.80 | < 0.0001 |
| GBT | 0.91 | 0.89 | 0.68 | 0.77 | 0.86 | < 0.0001 |
GBT gradient boosted tree, kNN k-nearest neighbor, LR logistic regression, PC putamen to caudate average count ratio, SBR specific binding ratio
Fig. 5Density plots of probabilities of three features. Violin plots show density of medium values. GBT gradient boosted trees, kNN k-nearest neighbor, LR logistic regression
Diagnosis of PS/PD/DLB based on features and combinations
| Method | AUC | Sensitivity | Specificity | ||
|---|---|---|---|---|---|
| Specific binding ratio (SBR) | 0.85 | 0.94 | 0.65 | < 0.0001 | |
| Asymmetry index | 0.77 | 0.54 | 0.95 | < 0.0001 | |
| PC ratio | 0.71 | 0.69 | 0.70 | < 0.0001 | |
| SBR + asymmetry index (Model 1) | 0.86 | 0.91 | 0.73 | < 0.0001 | |
| SBR + asymmetry index + PC ratio | 0.86 | 0.89 | 0.73 | < 0.0001 | |
| Normal or abnormal (Model 2) | LR | 0.82 | 0.91 | 0.70 | < 0.0001 |
| GBT | 0.88 | 0.83 | 0.87 | < 0.0001 | |
| Age + HiLo (LR) + SymAsym (kNN) + CommaDot (LR) | 0.90 | 0.79 | 0.95 | < 0.0001 | |
| Best forward-stepwise model: age + HiLo(GBT) + SymAsym (kNN) + CommaDot (LR) (Model 3) | 0.93 | 0.86 | 0.92 | < 0.0001 | |
GBT gradient boosted trees, HiLo high/low, kNN k-nearest neighbors, LR logistic regression, ML machine learning, PC putamen to caudate average count ratio, SBR specific binding ratio, SymAsym symmetry or asymmetry ratio
Fig. 6Receiver-operating characteristics (ROC) curves for Models 1, 2 and 3. SBR specific binding ratio