Literature DB >> 35796982

Specialization of RNA Polymerase I in Comparison to Other Nuclear RNA Polymerases of Saccharomyces cerevisiae.

Philipp E Merkl1,2, Christopher Schächner1, Michael Pilsl1, Katrin Schwank1, Catharina Schmid1, Gernot Längst1, Philipp Milkereit3, Joachim Griesenbeck1, Herbert Tschochner4.   

Abstract

In archaea and bacteria the major classes of RNAs are synthesized by one DNA-dependent RNA polymerase (RNAP). In contrast, most eukaryotes have three highly specialized RNAPs to transcribe the nuclear genome. RNAP I synthesizes almost exclusively ribosomal (r)RNA, RNAP II synthesizes mRNA as well as many noncoding RNAs involved in RNA processing or RNA silencing pathways and RNAP III synthesizes mainly tRNA and 5S rRNA. This review discusses functional differences of the three nuclear core RNAPs in the yeast S. cerevisiae with a particular focus on RNAP I transcription of nucleolar ribosomal (r)DNA chromatin.
© 2022. The Author(s).

Entities:  

Keywords:  Chromatin; Gene expression; Nucleosomes; RNA polymerase I; RNA polymerase II; RNA polymerase III; Ribosomal RNA genes; Saccharomyces cerevisiae; Transcription; Transcription factors; Yeast

Mesh:

Substances:

Year:  2022        PMID: 35796982     DOI: 10.1007/978-1-0716-2501-9_4

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  72 in total

Review 1.  Comparative overview of RNA polymerase II and III transcription cycles, with focus on RNA polymerase III termination and reinitiation.

Authors:  Aneeshkumar G Arimbasseri; Keshab Rijal; Richard J Maraia
Journal:  Transcription       Date:  2014

Review 2.  RNA polymerase I and III: similar yet unique.

Authors:  Heena Khatter; Matthias K Vorländer; Christoph W Müller
Journal:  Curr Opin Struct Biol       Date:  2017-07-22       Impact factor: 6.809

Review 3.  Distinct Mechanisms of Transcription Initiation by RNA Polymerases I and II.

Authors:  Christoph Engel; Simon Neyer; Patrick Cramer
Journal:  Annu Rev Biophys       Date:  2018-05-20       Impact factor: 12.981

Review 4.  Conservation between the RNA polymerase I, II, and III transcription initiation machineries.

Authors:  Alessandro Vannini; Patrick Cramer
Journal:  Mol Cell       Date:  2012-02-24       Impact factor: 17.970

Review 5.  Eukaryotic core promoters and the functional basis of transcription initiation.

Authors:  Vanja Haberle; Alexander Stark
Journal:  Nat Rev Mol Cell Biol       Date:  2018-10       Impact factor: 94.444

Review 6.  Signaling to and from the RNA Polymerase III Transcription and Processing Machinery.

Authors:  Ian M Willis; Robyn D Moir
Journal:  Annu Rev Biochem       Date:  2018-01-12       Impact factor: 23.643

Review 7.  Born to run: control of transcription elongation by RNA polymerase II.

Authors:  Fei Xavier Chen; Edwin R Smith; Ali Shilatifard
Journal:  Nat Rev Mol Cell Biol       Date:  2018-07       Impact factor: 94.444

Review 8.  Regulation of pol III transcription by nutrient and stress signaling pathways.

Authors:  Robyn D Moir; Ian M Willis
Journal:  Biochim Biophys Acta       Date:  2012-11-16

Review 9.  Transcription termination by the eukaryotic RNA polymerase III.

Authors:  Aneeshkumar G Arimbasseri; Keshab Rijal; Richard J Maraia
Journal:  Biochim Biophys Acta       Date:  2012-10-23

Review 10.  Regulation of tRNA synthesis by the general transcription factors of RNA polymerase III - TFIIIB and TFIIIC, and by the MAF1 protein.

Authors:  Damian Graczyk; Małgorzata Cieśla; Magdalena Boguta
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2018-02-06       Impact factor: 4.490

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