Literature DB >> 28743025

RNA polymerase I and III: similar yet unique.

Heena Khatter1, Matthias K Vorländer1, Christoph W Müller2.   

Abstract

The majority of non-protein-coding RNAs present in eukaryotic cells comprises rRNAs, tRNAs and U6 snRNA that are involved in protein biosynthesis and are synthesized by DNA-dependent-RNA polymerase I and III. The transcription cycle (initiation, elongation and termination) has similar principles in all three nuclear RNA polymerases with specific features that are reflected back in their structures. Recently, owing to the 'resolution revolution' in electron cryo-microscopy, there has been a significant advancement in the understanding of these molecular machines. Here, we highlight the structure-function adaptation in specificity and activity of these molecular machines and present parallels and distinctions between their transcription mechanisms.
Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

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Year:  2017        PMID: 28743025     DOI: 10.1016/j.sbi.2017.05.008

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  28 in total

Review 1.  Mastering the control of the Rho transcription factor for biotechnological applications.

Authors:  Tomás G Villa; Ana G Abril; Angeles Sánchez-Pérez
Journal:  Appl Microbiol Biotechnol       Date:  2021-05-08       Impact factor: 4.813

Review 2.  Signaling to and from the RNA Polymerase III Transcription and Processing Machinery.

Authors:  Ian M Willis; Robyn D Moir
Journal:  Annu Rev Biochem       Date:  2018-01-12       Impact factor: 23.643

3.  Conditional depletion of the RNA polymerase I subunit PAF53 reveals that it is essential for mitosis and enables identification of functional domains.

Authors:  Rachel McNamar; Zakaria Abu-Adas; Katrina Rothblum; Bruce A Knutson; Lawrence I Rothblum
Journal:  J Biol Chem       Date:  2019-11-14       Impact factor: 5.157

4.  Molecular Topology of RNA Polymerase I Upstream Activation Factor.

Authors:  Bruce A Knutson; Marissa L Smith; Alana E Belkevich; Aula M Fakhouri
Journal:  Mol Cell Biol       Date:  2020-06-15       Impact factor: 4.272

5.  A Novel Assay for RNA Polymerase I Transcription Elongation Sheds Light on the Evolutionary Divergence of Eukaryotic RNA Polymerases.

Authors:  Catherine E Scull; Zachariah M Ingram; Aaron L Lucius; David A Schneider
Journal:  Biochemistry       Date:  2019-04-05       Impact factor: 3.162

Review 6.  Specialization of RNA Polymerase I in Comparison to Other Nuclear RNA Polymerases of Saccharomyces cerevisiae.

Authors:  Philipp E Merkl; Christopher Schächner; Michael Pilsl; Katrin Schwank; Catharina Schmid; Gernot Längst; Philipp Milkereit; Joachim Griesenbeck; Herbert Tschochner
Journal:  Methods Mol Biol       Date:  2022

7.  RNA polymerase I (Pol I) passage through nucleosomes depends on Pol I subunits binding its lobe structure.

Authors:  Philipp E Merkl; Michael Pilsl; Tobias Fremter; Katrin Schwank; Christoph Engel; Gernot Längst; Philipp Milkereit; Joachim Griesenbeck; Herbert Tschochner
Journal:  J Biol Chem       Date:  2020-02-14       Impact factor: 5.157

Review 8.  Organization and regulation of gene transcription.

Authors:  Patrick Cramer
Journal:  Nature       Date:  2019-08-28       Impact factor: 49.962

Review 9.  The Structures of Eukaryotic Transcription Pre-initiation Complexes and Their Functional Implications.

Authors:  Basil J Greber; Eva Nogales
Journal:  Subcell Biochem       Date:  2019

Review 10.  Transcription Regulation Through Nascent RNA Folding.

Authors:  Leonard Schärfen; Karla M Neugebauer
Journal:  J Mol Biol       Date:  2021-04-01       Impact factor: 6.151

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