Literature DB >> 35781923

Brain Waves Analysis Via a Non-Parametric Bayesian Mixture of Autoregressive Kernels.

Guilllermo Granados-Garcia1, Marc Fiecas2, Shahbaba Babak3, Norbert J Fortin3, Hernando Ombao1.   

Abstract

The standard approach to analyzing brain electrical activity is to examine the spectral density function (SDF) and identify frequency bands, defined a priori, that have the most substantial relative contributions to the overall variance of the signal. However, a limitation of this approach is that the precise frequency and bandwidth of oscillations are not uniform across different cognitive demands. Thus, these bands should not be arbitrarily set in any analysis. To overcome this limitation, the Bayesian mixture auto-regressive decomposition (BMARD) method is proposed, as a data-driven approach that identifies (i) the number of prominent spectral peaks, (ii) the frequency peak locations, and (iii) their corresponding bandwidths (or spread of power around the peaks). Using the BMARD method, the standardized SDF is represented as a Dirichlet process mixture based on a kernel derived from second-order auto-regressive processes which completely characterize the location (peak) and scale (bandwidth) parameters. A Metropolis-Hastings within the Gibbs algorithm is developed for sampling the posterior distribution of the mixture parameters. Simulations demonstrate the robust performance of the proposed method. Finally, the BMARD method is applied to analyze local field potential (LFP) activity from the hippocampus of laboratory rats across different conditions in a non-spatial sequence memory experiment, to identify the most prominent frequency bands and examine the link between specific patterns of brain oscillatory activity and trial-specific cognitive demands.

Entities:  

Keywords:  Bayesian nonparametrics; Dirichlet Process; Markov chain Monte Carlo; Spectral density estimation; local field potentials

Year:  2021        PMID: 35781923      PMCID: PMC9246339          DOI: 10.1016/j.csda.2021.107409

Source DB:  PubMed          Journal:  Comput Stat Data Anal        ISSN: 0167-9473            Impact factor:   2.035


  16 in total

1.  Induced alpha band power changes in the human EEG and attention.

Authors:  W Klimesch; M Doppelmayr; H Russegger; T Pachinger; J Schwaiger
Journal:  Neurosci Lett       Date:  1998-03-13       Impact factor: 3.046

Review 2.  Time cells in the hippocampus: a new dimension for mapping memories.

Authors:  Howard Eichenbaum
Journal:  Nat Rev Neurosci       Date:  2014-10-01       Impact factor: 34.870

3.  Empirical Frequency Band Analysis of Nonstationary Time Series.

Authors:  Scott A Bruce; Cheng Yong Tang; Martica H Hall; Robert T Krafty
Journal:  J Am Stat Assoc       Date:  2019-10-28       Impact factor: 5.033

4.  A Sequence of events model of episodic memory shows parallels in rats and humans.

Authors:  Timothy A Allen; Andrea M Morris; Aaron T Mattfeld; Craig E L Stark; Norbert J Fortin
Journal:  Hippocampus       Date:  2014-05-23       Impact factor: 3.899

5.  mclust 5: Clustering, Classification and Density Estimation Using Gaussian Finite Mixture Models.

Authors:  Luca Scrucca; Michael Fop; T Brendan Murphy; Adrian E Raftery
Journal:  R J       Date:  2016-08       Impact factor: 3.984

6.  Spectral decompositions of multiple time series: a Bayesian non-parametric approach.

Authors:  Christian Macaro; Raquel Prado
Journal:  Psychometrika       Date:  2013-10-24       Impact factor: 2.500

7.  A nonparametric Bayesian model for estimating spectral densities of resting-state EEG twin data.

Authors:  Brian Hart; Michele Guindani; Stephen Malone; Mark Fiecas
Journal:  Biometrics       Date:  2020-10-26       Impact factor: 2.571

8.  Nonspatial Sequence Coding in CA1 Neurons.

Authors:  Timothy A Allen; Daniel M Salz; Sam McKenzie; Norbert J Fortin
Journal:  J Neurosci       Date:  2016-02-03       Impact factor: 6.167

9.  Evolutionary State-Space Model and Its Application to Time-Frequency Analysis of Local Field Potentials.

Authors:  Xu Gao; Weining Shen; Babak Shahbaba; Norbert J Fortin; Hernando Ombao
Journal:  Stat Sin       Date:  2020-07       Impact factor: 1.330

10.  An exploratory data analysis of electroencephalograms using the functional boxplots approach.

Authors:  Duy Ngo; Ying Sun; Marc G Genton; Jennifer Wu; Ramesh Srinivasan; Steven C Cramer; Hernando Ombao
Journal:  Front Neurosci       Date:  2015-08-19       Impact factor: 4.677

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