| Literature DB >> 35777902 |
Zeeshan Ahmad1, Shujaul Mulk Khan2, Sue Page3, Saad Alamri4, Mohamed Hashem5.
Abstract
INTRODUCTION: There has been limited research conducted on the identifications/methodological approaches of using plant species as indicators of the presence of economically, important mineral resources.Entities:
Keywords: Canonical correspondence analysis; Indicator species analysis; Microhabitat; Mine zones; Mines’ indicators; Structural equation model
Mesh:
Substances:
Year: 2021 PMID: 35777902 PMCID: PMC9263987 DOI: 10.1016/j.jare.2021.10.005
Source DB: PubMed Journal: J Adv Res ISSN: 2090-1224 Impact factor: 12.822
Fig. 1GIS generated map of the study area showing three mining regions.
Fig. 2CA dendrogram using Jaccard Distance Measurement separated all the stations into three vegetation types using ward linkage methods (with narrow single-spaced width).
Fig. 3The TWCA dendrogram comprehended the distribution of one hundred-five plant species in the studied region using Jaccard Distance Measurements with the Ward Linkage method.
Fig. 4The distribution curves (a-c) and data attribute plots (d-f) of the topmost three indicator plants of the marble vegetation zone in relation with measured environmental factors after Species Distribution and Canonical Correspondence Analyses of PCORD and CANOCO software’s reconfirming the identification of ISA graphically.
Indicator Species Analysis indicating the topmost indicator species (with bold font) of each mineral mines subtype of vegetation/zone (1–3) in relation with various environmental factors at 25% threshold level of indicators founded on Monte Carlo Test of significance for the observed maximum IV (percentage of perfect indication established on combining values for the relative abundance and frequency for plant species along with probability value ≤ 0.05. [Max grp = Maximum group (group identifier for maximum observed IV), IV = Observed indicator values, p*= Probability value (1 + number of runs>=observed)/(1 + number of randomized runs)].
| S. No. | Botanical Names | Marble Mining community defined based on moderate calcium | Coal Mining community defined based on lower pH | Chromite Mining Community defined by values of Zinc | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Max grp | IV | p* | Max grp. | IV | p* | Max. grp. | IV | p* | ||
| 1 | 3 | 27.8 | 0.173 | 9 | 35.2 | 0.493 | 6 | 25.7 | 0.584 | |
| 2 | 7 | 20.7 | 0.672 | 9 | 8.0 | 0.823 | 1 | 24.3 | 0.070 | |
| 3 | 1 | 14.7 | 0.446 | 8 | 11.0 | 0.392 | 7 | 16.7 | 0.512 | |
| 4 | 4 | 38.5 | 0.066 | 9 | 12.0 | 0.582 | 6 | 21.4 | 0.492 | |
| 5 | 6 | 20.7 | 0.685 | 9 | 8.0 | 0.823 | 6 | 7.1 | 1.000 | |
| 6 | 5 | 11.7 | 0.905 | 9 | 20.0 | 0.453 | 6 | 19.5 | 0.611 | |
| 7 | 8 | 80.7 | 0.002 | 8 | 8.9 | 1.000 | 1 | 26.9 | 0.326 | |
| 8 | 4 | 50.0 | 0.041 | 8 | 11.3 | 0.226 | 7 | 11.8 | 0.899 | |
| 9 | 4 | 25.0 | 0.657 | 9 | 4.0 | 1.000 | 6 | 7.1 | 1.000 | |
| 10 | 4 | 27.2 | 0.161 | 8 | 6.5 | 1.000 | 7 | 23.1 | 0.419 | |
| 11 | 3 | 22.8 | 0.373 | 9 | 16.0 | 0.568 | 6 | 28.6 | 0.280 | |
| 12 | 5 | 20.0 | 0.816 | 9 | 4.0 | 1.000 | 6 | 7.1 | 1.000 | |
| 13 | 1 | 25.0 | 0.656 | 8 | 34.3 | 0.017 | 6 | 7.1 | 1.000 | |
| 14 | 1 | 13.1 | 0.934 | 8 | 11.4 | 0.217 | 6 | 7.1 | 1.000 | |
| 15 | 3 | 13.2 | 0.844 | 9 | 8.0 | 1.000 | 7 | 12.7 | 0.897 | |
| 16 | 1 | 25.0 | 0.656 | 8 | 14.3 | 0.217 | 5 | 21.6 | 0.375 | |
| 17 | 6 | 21.6 | 0.348 | 9 | 8.2 | 1.000 | 5 | 9.2 | 0.964 | |
| 18 | 3 | 11.3 | 0.583 | 8 | 7.1 | 1.000 | 7 | 26.1 | 0.291 | |
| 19 | 8 | 55.8 | 0.012 | 8 | 19.2 | 0.625 | 1 | 31.1 | 0.285 | |
| 20 | 1 | 56.5 | 0.018 | 8 | 39.3 | 0.013 | 9 | 66.7 | 0.010 | |
| 21 | 4 | 50.0 | 0.061 | 8 | 10.4 | 0.406 | 7 | 10.6 | 1.000 | |
| 22 | 4 | 45.2 | 0.046 | 9 | 7.8 | 1.000 | 7 | 20.3 | 0.501 | |
| 23 | 2 | 10.9 | 0.961 | 8 | 33.3 | 0.373 | 9 | 51.6 | 0.051 | |
| 24 | 4 | 16.5 | 0.636 | 9 | 12.0 | 0.725 | 5 | 21.6 | 0.375 | |
| 25 | 6 | 12.9 | 0.940 | 9 | 8.0 | 1.000 | 6 | 14.3 | 0.796 | |
| 26 | 1 | 25.0 | 0.668 | 8 | 14.3 | 0.218 | 9 | 17.0 | 0.109 | |
| 27 | 7 | 28.8 | 0.293 | 9 | 12.0 | 0.575 | 1 | 47.6 | 0.032 | |
| 28 | 3 | 15.7 | 0.465 | 9 | 5.4 | 1.000 | 7 | 21.6 | 0.386 | |
| 29 | 3 | 25.0 | 0.672 | 9 | 4.0 | 1.000 | 6 | 7.1 | 1.000 | |
| 30 | 7 | 21.4 | 0.684 | 8 | 5.3 | 1.000 | 5 | 20.5 | 0.367 | |
| 31 | 4 | 29.1 | 0.150 | 8 | 15.9 | 0.777 | 7 | 26.8 | 0.298 | |
| 32 | 2 | 15.8 | 0.610 | 8 | 44.0 | 0.030 | 9 | 40.0 | 0.109 | |
| 33 | 6 | 26.1 | 0.267 | 8 | 9.0 | 0.780 | 9 | 60.8 | 0.021 | |
| 34 | 5 | 20.0 | 0.822 | 8 | 14.3 | 0.220 | 5 | 25.0 | 0.317 | |
| 35 | 5 | 18.0 | 0.587 | 9 | 21.7 | 0.434 | 5 | 14.4 | 0.847 | |
| 36 | 4 | 25.0 | 0.657 | 9 | 4.0 | 1.000 | 6 | 7.1 | 1.000 | |
| 37 | 6 | 17.4 | 0.740 | 8 | 8.7 | 0.402 | 7 | 16.7 | 0.511 | |
| 38 | 1 | 14.4 | 0.724 | 8 | 28.6 | 0.043 | 7 | 16.7 | 0.511 | |
| 39 | 1 | 30.3 | 0.141 | 8 | 28.1 | 0.263 | 6 | 33.5 | 0.168 | |
| 40 | 4 | 29.6 | 0.019 | 9 | 16.0 | 0.560 | 6 | 19.2 | 0.527 | |
| 41 | 4 | 25.0 | 0.658 | 8 | 14.3 | 0.226 | 7 | 16.7 | 0.511 | |
| 42 | 5 | 40.0 | 0.138 | 9 | 8.0 | 1.000 | 7 | 8.7 | 1.000 | |
| 43 | 6 | 12.8 | 0.940 | 9 | 8.0 | 1.000 | 6 | 14.3 | 0.796 | |
| 44 | 5 | 20.0 | 0.822 | 8 | 14.3 | 0.220 | 5 | 25.0 | 0.317 | |
| 45 | 3 | 8 | 55.0 | 0.011 | 9 | 18.4 | 0.443 | 1 | 54.5 | 0.042 |
| 46 | 4 | 14.3 | 0.711 | 9 | 9.0 | 0.937 | 7 | 19.1 | 0.578 | |
| 47 | 6 | 27.1 | 0.195 | 9 | 48.0 | 0.058 | 6 | 16.4 | 0.838 | |
| 48 | 8 | 69.2 | 0.001 | 9 | 10.4 | 0.652 | 1 | 72.7 | 0.014 | |
| 49 | 8 | 64.0 | 0.009 | 8 | 7.1 | 0.893 | 1 | 23.0 | 0.427 | |
| 50 | 1 | 25.0 | 0.656 | 8 | 14.3 | 0.217 | 7 | 8.7 | 1.000 | |
| 51 | 4 | 14.9 | 0.445 | 8 | 11.2 | 0.211 | 6 | 7.1 | 1.000 | |
| 52 | 7 | 25.0 | 0.661 | 9 | 4.0 | 1.000 | 6 | 7.1 | 1.000 | |
| 53 | 5 | 20.0 | 0.822 | 8 | 14.3 | 0.220 | 5 | 25.0 | 0.317 | |
| 54 | 5 | 20.0 | 0.816 | 9 | 4.0 | 1.000 | 5 | 25.0 | 0.312 | |
| 55 | 5 | 20.0 | 0.816 | 9 | 4.0 | 1.000 | 6 | 7.1 | 1.000 | |
| 56 | 4 | 25.0 | 0.675 | 9 | 4.0 | 1.000 | 5 | 25.0 | 0.302 | |
| 57 | 8 | 12.1 | 0.831 | 9 | 18.8 | 0.488 | 1 | 49.7 | 0.065 | |
| 58 | 5 | 20.0 | 0.816 | 9 | 4.0 | 1.000 | 6 | 7.1 | 1.000 | |
| 59 | 3 | 10.7 | 0.818 | 9 | 12.0 | 0.580 | 5 | 15.9 | 0.659 | |
| 60 | 4 | 45.4 | 0.033 | 8 | 9.8 | 0.871 | 7 | 9.8 | 0.963 | |
| 61 | 3 | 10.8 | 0.848 | 8 | 18.8 | 0.445 | 9 | 26.9 | 0.266 | |
| 62 | 6 | 25.5 | 0.227 | 9 | 23.0 | 0.483 | 9 | 27.5 | 0.272 | |
| 63 | 5 | 31.5 | 0.067 | 9 | 20.0 | 0.449 | 5 | 11.8 | 0.890 | |
| 64 | 6 | 13.3 | 0.851 | 9 | 8.0 | 1.000 | 6 | 14.3 | 0.768 | |
| 65 | 4 | 16.0 | 0.698 | 8 | 30.8 | 0.479 | 7 | 58.9 | 0.012 | |
| 66 | 1 | 23.5 | 0.329 | 8 | 39.7 | 0.014 | 1 | 43.2 | 0.076 | |
| 67 | 1 | 61.5 | 0.013 | 8 | 57.1 | 0.001 | 9 | 33.3 | 0.175 | |
| 68 | 7 | 17.5 | 0.430 | 9 | 8.0 | 1.000 | 6 | 14.3 | 0.768 | |
| 69 | 4 | 50.0 | 0.061 | 8 | 7.4 | 1.000 | 7 | 6.9 | 1.000 | |
| 70 | 4 | 25.0 | 0.657 | 9 | 4.0 | 1.000 | 6 | 7.1 | 1.000 | |
| 71 | 3 | 31.8 | 0.158 | 9 | 8.0 | 1.000 | 9 | 26.2 | 0.265 | |
| 72 | 7 | 30.2 | 0.201 | 9 | 12.0 | 0.579 | 1 | 24.0 | 0.317 | |
| 73 | 2 | 19.6 | 0.407 | 9 | 16.6 | 0.685 | 6 | 17.8 | 0.684 | |
| 74 | 6 | 25.0 | 0.674 | 9 | 4.0 | 1.000 | 9 | 33.3 | 0.174 | |
| 75 | 1 | 25.0 | 0.679 | 8 | 14.3 | 0.220 | 9 | 33.3 | 0.175 | |
| 76 | 3 | 25.0 | 0.672 | 9 | 4.0 | 1.000 | 6 | 7.1 | 1.000 | |
| 77 | 8 | 21.9 | 0.353 | 8 | 8.3 | 0.858 | 5 | 29.1 | 0.192 | |
| 78 | 4 | 25.0 | 0.658 | 8 | 14.3 | 0.226 | 7 | 16.7 | 0.511 | |
| 79 | 2 | 16.7 | 1.000 | 8 | 14.3 | 0.236 | 7 | 16.7 | 0.509 | |
| 80 | 3 | 10.8 | 0.798 | 8 | 21.5 | 0.137 | 9 | 64.0 | 0.011 | |
| 81 | 5 | 20.0 | 0.816 | 9 | 4.0 | 1.000 | 6 | 7.1 | 1.000 | |
| 82 | 5 | 20.0 | 0.816 | 9 | 4.0 | 1.000 | 5 | 25.0 | 0.312 | |
| 83 | 3 | 10.3 | 1.000 | 9 | 8.0 | 1.000 | 7 | 13.9 | 0.871 | |
| 84 | 2 | 18.3 | 0.298 | 8 | 13.7 | 0.852 | 6 | 17.1 | 0.750 | |
| 85 | 6 | 25.0 | 0.673 | 9 | 4.0 | 1.000 | 7 | 26.1 | 0.291 | |
| 86 | 3 | 10.2 | 0.700 | 9 | 12.0 | 0.577 | 6 | 21.4 | 0.497 | |
| 87 | 7 | 10.8 | 0.973 | 9 | 8.0 | 1.000 | 7 | 13.7 | 0.862 | |
| 88 | 5 | 20.0 | 0.816 | 9 | 4.0 | 1.000 | 5 | 25.0 | 0.312 | |
| 89 | 2 | 16.7 | 1.000 | 9 | 4.0 | 1.000 | 7 | 16.7 | 0.530 | |
| 90 | 5 | 20.7 | 0.480 | 9 | 16.0 | 0.549 | 6 | 13.6 | 0.786 | |
| 91 | 7 | 38.4 | 0.046 | 8 | 8.2 | 1.000 | 1 | 30.0 | 0.190 | |
| 92 | 7 | 14.8 | 0.741 | 9 | 8.0 | 1.000 | 5 | 20.9 | 0.400 | |
| 93 | 2 | 7.7 | 1.000 | 8 | 7.3 | 0.866 | 7 | 29.9 | 0.203 | |
| 94 | 8 | 19.0 | 0.456 | 8 | 7.4 | 0.891 | 1 | 80.9 | 0.008 | |
| 95 | 8 | 26.2 | 0.306 | 9 | 12.0 | 0.586 | 5 | 13.3 | 0.795 | |
| 96 | 1 | 50.0 | 0.053 | 8 | 28.6 | 0.041 | 7 | 16.7 | 0.530 | |
| 97 | 1 | 8.9 | 0.965 | 8 | 9.5 | 0.851 | 1 | 27.3 | 0.252 | |
| 98 | 4 | 25.0 | 0.658 | 8 | 14.3 | 0.226 | 7 | 16.7 | 0.511 | |
| 99 | 5 | 31.3 | 0.098 | 9 | 24.0 | 0.301 | 1 | 12.1 | 0.892 | |
| 100 | 4 | 25.0 | 0.675 | 9 | 4.0 | 1.000 | 5 | 25.0 | 0.302 | |
| 101 | 4 | 25.0 | 0.675 | 9 | 4.0 | 1.000 | 5 | 25.0 | 0.302 | |
| 102 | 8 | 22.1 | 0.232 | 9 | 8.0 | 1.000 | 7 | 8.0 | 1.000 | |
| 103 | 1 | 25.0 | 0.656 | 8 | 14.3 | 0.217 | 7 | 6.9 | 1.000 | |
| 104 | 3 | 25.0 | 0.672 | 9 | 4.0 | 1.000 | 6 | 7.1 | 1.000 | |
| 105 | 2 | 33.3 | 0.216 | 9 | 8.0 | 1.000 | 6 | 14.3 | 0.796 | |
Fig. 5Distribution curves (a-c) and data attribute plots (d-f) for the topmost three indicators i.e., Olea ferruginea (first indicator), Gymnosporia royleana (2nd indicator) and Dicliptera bupleuroides (3rd indicator) of the coal mine vegetation zone in relation to different environmental factors using Species Distribution and Canonical Correspondence Analyses of PCORD and CANOCO softwares.
Fig. 6Species Distribution curves (a-c) and data attribute plots (d-f) for the top three indicators of the chromite mine zone together with measured environmental factors using after PCORD and CANOCO software’s.
CCA summary of the entire mines' vegetation zone and their distinct indicators in relation to measured environmental variables.
| Axes | 1 | 2 | 3 | 4 |
|---|---|---|---|---|
| Eigenvalues | 0.98 | 0.95 | 0.76 | 0.598 |
| Species-environment correlations | 0.99 | 0.98 | 0.99 | 0.894 |
| Cumulative percentage variance of species data | 19.5 | 38.4 | 53.6 | 65.5 |
| Cumulative percentage variance of species-environment relation | 21.4 | 42.1 | 58.8 | 71.8 |
| Sum of all eigenvalues | 5.018 | |||
| Sum of all canonical eigenvalues | 4.578 | |||
| Test of significance of first canonical axis | Test of significance of all canonical axes | |||
| Eigenvalue | 0.98 | Trace | 4.578 | |
| F-ratio | 1.21 | F-ratio | 3.063 | |
| P-value | 0.04 | P-value | 0.002 | |
Fig. 7CCA biplot showing the distribution of (a) all mine stations and (b) different mine vegetation zones along with their respective indicators in relation to measured environmental gradients.
Standardized and Unstandardized Coefficients of the topmost indicator species of each subtypes of vegetation after SEM analysis.
| Chi-square = 312.552 Probability level = 0.089 | Indicators | Unstandardized Coefficients | Standardized Coefficients | ||||
|---|---|---|---|---|---|---|---|
| Variables | Beta | S.E. | C.R. | P | Beta | ||
| Chromite Mines' Vegetation | Fe | 27.769 | 14.215 | 1.953 | 0.041 | 0.311 | |
| Mn | 3.288 | 1.754 | 1.874 | 0.051 | 0.299 | ||
| Ni | 8.515 | 3.071 | 2.773 | 0.006 | 0.375 | ||
| Zn | −65.638 | 17.004 | −3.860 | 0.001 | −0.522 | ||
| Ca | 0.964 | 0.429 | 2.247 | 0.025 | 0.288 | ||
| K | 4.553 | 1.593 | 2.858 | 0.004 | 0.336 | ||
| Clay | −0.370 | 0.095 | −3.892 | 0.001 | −0.498 | ||
| Marble Mines' Vegetation | Co | 199.173 | 57.640 | 3.455 | 0.001 | 0.521 | |
| Co | 370.589 | 56.311 | 6.581 | 0.001 | 0.758 | ||
| Ni | −2.011 | 0.738 | −2.726 | 0.006 | −0.359 | ||
| Mg | 3.778 | 1.505 | 2.510 | 0.012 | 0.330 | ||
| pH | 6.708 | 1.940 | 3.458 | 0.001 | 0.455 | ||
| Coal Mines' Vegetation | pH | 1.569 | 0.728 | 2.154 | 0.031 | 0.118 | |
| TDS | 0.040 | 0.002 | 18.967 | 0.001 | 1.040 | ||
| Ca | −0.954 | 0.453 | −2.104 | 0.035 | −0.269 | ||
| EC | 0.581 | 0.132 | 4.407 | 0.001 | 8.842 | ||
| TDS | −0.450 | 0.106 | −4.253 | 0.001 | −8.476 | ||
| Cr | 1.114 | 0.296 | 3.757 | 0.001 | 0.266 | ||
| Ca | −0.433 | 0.198 | −2.194 | 0.028 | −0.183 | ||
| pH | −2.626 | 1.181 | −2.223 | 0.026 | −0.213 | ||
| EC | 0.485 | 0.056 | 8.665 | 0.001 | 11.105 | ||
| TDS | −0.384 | 0.045 | −8.573 | 0.001 | −10.864 | ||
S.E = Standard error; C.R = Critical ratio, P = Probability.
Fig. 8Structural Equation Model - Analyses of the three mineral mines vegetation each with a distinct plant indicator in relation to different environmental variables.
Detail results of covariance and correlation analyses among the significant environmental variables of the Marble, Coal and Chromite mineral mines.
| Variables | Covariances | Correlations | |||
|---|---|---|---|---|---|
| Beta | S.E. | C.R. | P | Beta | |
| pH < --> EC | −29.110 | 9.598 | −3.033 | 0.002 | -0.635 |
| pH < --> TDS | −35.569 | 11.834 | −3.006 | 0.003 | -0.627 |
| pH < --> Ca | 0.400 | 0.155 | 2.582 | 0.010 | 0.471 |
| EC < --> TDS | 15944.036 | 3989.341 | 3.997 | 0.001 | 0.998 |
| EC < --> Ca | −103.335 | 42.872 | −2.410 | 0.016 | -0.433 |
| TDS < --> Ca | −124.023 | 52.763 | −2.351 | 0.019 | -0.420 |
| K < --> Mn | 0.406 | 0.160 | 2.541 | 0.011 | 0.503 |
| Zn < --> Mg | 0.046 | 0.019 | 2.384 | 0.017 | 0.465 |
| Ca < --> Clay | −7.859 | 3.289 | −2.390 | 0.017 | -0.395 |
Variance matrix of all significant environmental factors affecting plant indicators in the subtropical mineral mines region KPK, Pakistan.
| Variables | Beta | S.E. | C.R. | P |
|---|---|---|---|---|
| K | 0.270 | 0.068 | 4.000 | 0.001 |
| pH | 0.163 | 0.041 | 4.000 | 0.001 |
| EC | 12906.976 | 3226.744 | 4.000 | 0.001 |
| TDS | 19761.603 | 4940.401 | 4.000 | 0.001 |
| Ca | 4.418 | 1.055 | 4.189 | 0.001 |
| Mn | 2.416 | 0.604 | 4.000 | 0.001 |
| Zn | 0.037 | 0.009 | 4.000 | 0.001 |
| Mg | 0.270 | 0.068 | 4.000 | 0.001 |
| Clay | 89.753 | 22.438 | 4.000 | 0.001 |
| Fe | 0.037 | 0.009 | 4.000 | 0.001 |
| Ni | 1.125 | 0.281 | 4.000 | 0.001 |
| Co | 0.000 | 0.000 | 4.000 | 0.001 |
| Cr | 1.406 | 0.352 | 4.000 | 0.001 |
Chi-square statistics (CMIN) for Goodness of Model Fit of SEM
| Model | NPAR | CMIN | P | CMIN/DF |
|---|---|---|---|---|
| Default model | 53 | 312.552 | 0.089 | 1.563 |
| Saturated model | 253 | 0.0001 | 0.0001 | |
| Independence model | 22 | 840.146 | 0.0001 | 3.637 |
NPAR = Number of parameters.