| Literature DB >> 35756069 |
Yong Qi1,2, Lele Ai1,2, Changqiang Zhu1,2,3, Yongfeng Lu4, Ruichen Lv1,2, Yingqing Mao1,2, Nianhong Lu1,2, Weilong Tan1,2.
Abstract
Background: Anaplasma spp., causative agents of anaplasmosis, pose significant a threat to public health and economic losses in livestock farming. Co-infections/co-existence of various Anaplasma spp. may facilitate pathogen interactions and the emergence of novel variants, represent potential dangers to public health and economic losses from livestock farming, and raise challenges of detection and diagnosis. The information regarding co-infection/co-existence of Anaplasma in their vector ticks and wild animals is limited and needs urgent investigation.Entities:
Keywords: Anaplasma; Erinaceus amurensis; co-existence; co-infection; hedgehogs; ticks
Year: 2022 PMID: 35756069 PMCID: PMC9226643 DOI: 10.3389/fmicb.2022.913650
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 6.064
Primers used for PCR amplification in the present study.
|
|
|
|
|
|
|---|---|---|---|---|
| Eh-out1 | TTGAGAGTTTGATCCTGGCTCAGAACG | 660 | 55 | |
| Eh-out2 | CACCTCTACACTAGGAATTCCGCTATC | |||
| Eh-gs1 | GTAATAACTGTATAATCCCTG | 280 | 55 | |
| Eh-gs2 | GTACCGTCATTATCTTCCCTA | |||
| An16S1 | GTCACTGACCCAACCTTAAATGGCTGC | 1,432 | 51 | |
| An16S2 | ATCCTGGCTCAGAACGAACGCTGG | |||
| An16S3 | GCGCCCTTCCGTTAAGAAGGATCTA | 930 | 54 | |
| An16S4 | AGCTTAACACATGCAAGTCGAACGGA | |||
| Four | AnU1F | AAGCTTAACACATGCAAGTCGAA | 1,400 | 56 |
| AnU1R | AGTCACTGACCCAACCTTAAATG | |||
| Anph2F | GTCGAACGGATTATTCTTTATAGCTTGC | 926 | 56 | |
| Anph2R | CCCTTCCGTTAAGAAGGATCTAATCTCC | |||
| Anpt2F | GATTTTTGTCGTAGCTTGCTATG | 680 | 55 | |
| Anpt2R | TAGCACTCATCGTTTACAGC | |||
| Anct2F | CTGCTTTTAATACTGCAGGACTA | 426 | 55 | |
| Anct2R | ATGCAGCACCTGTGYGAGG | |||
| Anbo2F | CTCGTAGCTTGCTATGAGAAC | 551 | 55 | |
| Anbo2R | TCTCCCGGACTCCAGTCTG | |||
| AnovMSP45 | GGGAGCTCCTATGAATTACAGAGAATTGTTTAC | 852 | 60 | |
| AnovMSP43 | CCGGATCCTTAGCTGAACAGGAATCTTGC | |||
| ACM1F | GCGCATTCTGGAGGCTG | 1,479 | 55 | |
| ACM1R | GACACAGCCAAGTCAAACGC | |||
| ACM2F | AATGAAGCGTGAAGTGGC | 848 | 55 | |
| ACM2R | GTACCACGCCTTCCTCAA | |||
| Ticks (large subunit ribosomal RNA gene) | TickHF | GGTATTTTGACTATACAAAGGTATTG | 278 | 54 |
| TickHR | TTATTACGCTGTTATCCCTAGAGTATT |
First, the primer pair used in the first round for the amplification of the 16S rRNA gene shared by all the four Anaplasma spp., including A. phagocytophilum, A. platys, A. centrale, and A. bovis. Second, species-specific primer sets were used in the second round for the amplification of the 16S rRNA gene of the four Anaplasma spp.
Figure 1Typical co-infection with various Anaplasma spp. are indicated by overlapping in the sequencing analysis with SnapGene software. The overlapping peaks are indicated by black arrows.
Figure 2Phylogenetic tree of Anaplasma species based on partial rrs gene sequence. The sequences obtained in this study are indicated with black dots. The phylogenetic tree was generated using the maximum likelihood method with 1,000 replicates for bootstrap testing in MEGA 7.0 software. Only bootstrap values > 50% are shown. The scale bar indicates nucleotide substitutions per site. The species, locations, and GenBank accession numbers of the reference sequences are shown in each line.
Co-existence/co-infections of various Anaplasma spp. or variants in various samples.
|
| |||
|---|---|---|---|
|
|
| ||
| Quintuple | 0 | 0 | 1 |
| | 0 | 0 | 1 |
| Quadruple | 0 | 0 | 2 |
| | 0 | 0 | 2 |
| Triple | 1 | 0 | 5 |
| | 0 | 0 | 3 |
| | 0 | 0 | 1 |
| | 0 | 0 | 1 |
| Cryptoplasma sp. | |||
| | 1 | 0 | 0 |
| Double | 5 | 0 | 4 |
| | 5 | 0 | 4 |
| Single | 20 | 0 | 1 |
| | 6 | 0 | 1 |
| | 14 | 14 | 0 |
| None | 149 | 16 | 155 |
Figure 3Potential transmission circle of Anaplasma spp. in ticks and animals in the investigated area. The thickness of the arrow represents the parasitic rates (number of ticks of specific species/number of total parasitic ticks) of each tick species on hedgehog or cattle hosts, which are also indicated beside the arrows. The relative abundances of each Anaplasma spp. in positive samples are indicated. Data on cattle were not obtained.