| Literature DB >> 34238975 |
Yaqun Yan1, Kunlun Wang1, Yanyan Cui2, Yongchun Zhou1, Shanshan Zhao1, Yajun Zhang1, Fuchun Jian1, Rongjun Wang1, Longxian Zhang1, Changshen Ning3.
Abstract
Anaplasma species, which are distributed worldwide, are gram-negative obligate intracellular tick-borne bacteria that pose a threat to human and animal health. Haemaphysalis longicornis ticks play a vital role as vectors in the transmission of Anaplasma pathogens. However, the Anaplasma species carried by H. longicornis in China are yet to be characterized. In this study, 1074 H. longicornis specimens were collected from goats in four provinces of China from 2018 to 2019 and divided into 371 sample pools. All tick sample pools were examined for the presence of Anaplasma species via nested PCR amplification of 16S ribosomal RNA, major surface protein 4 (msp4), or citric acid synthase (gltA) genes, which were sequenced to determine the molecular and phylogenetic characteristics of the isolates. The overall Anaplasma spp-positive rate of H. longicornis was determined to be 26.68% (99/371). The percentage prevalence of A. phagocytophilum-like1, A. bovis, A. ovis, A. marginale, and A. capra were 1.08% (4/371), 13.21% (49/371), 13.21% (49/371), 1.35% (5/371), and 10.24% (38/371), respectively, and the co-infection rate of two or more types of Anaplasma was 6.47% (24/371). Phylogenetic analyses led to the classification of A. phagocytophilum into an A. phagocytophilum-like1 (Anaplasma sp. Japan) group. Anaplasma bovis sequences obtained in this study were 99.8-100% identical to those of an earlier strain isolated from a Chinese tick (GenBank accession no. KP314251). Anaplasma ovis sequences showed 99.3-99.6% identity to an A. ovis human strain identified from a Cypriot patient (GenBank accession no. FJ460443). Only one msp4 sequence of A. marginale was detected and was grouped with those of other A. marginale isolates, and these A. capra isolates obtained in this present study may be zoonotic. The detection and characterization of four Anaplasma species in H. longicornis in this study have added to the current knowledge of the parasite and provided data on multiple Anaplasma species with veterinary and medical significance from four provinces of China.Entities:
Year: 2021 PMID: 34238975 PMCID: PMC8266805 DOI: 10.1038/s41598-021-93629-3
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Geographic map of the sampling locations of China. The figure was originally designed by the authors under the software ArcGIS 10.2. The original vector diagram imported in ArcGIS was adapted from Natural Earth (http://www.naturalearthdata.com).
Primers and amplification conditions for PCR detection of Anaplasma spp. in H. longicornis.
| Pathogens | Target gene | Primer (5′–3′) | Amplicon (bp) | Thermocycler program | Cycles | Final extension | References | |||
|---|---|---|---|---|---|---|---|---|---|---|
| Denaturation Annealing | ||||||||||
| 16S rRNA | EE1: TCCTGGCTCAGAACGAACGCTGGCGGC | 1430 | 94 °C 5 min | 94 °C 30 s | 55 °C 30 s | 72 °C 30 s | 35 | 72 °C 10 min | [ | |
| EE2: GTCACTGACCCAACCTTAAATGGCTG | ||||||||||
| SSAP2f: GCTGAATGTGGGGATAATTTAT | 641 | 94 °C 5 min | 94 °C 35 s | 55 °C 40 s | 72 °C 40 s | 40 | 72 °C 10 min | [ | ||
| SSAP2r: ATGGCTGCTTCCTTTCGGTTA | ||||||||||
| 16S rRNA | EE1: TCCTGGCTCAGAACGAACGCTGGCGGC | 1430 | 94 °C 5 min | 94 °C 30 s | 55 °C 30 s | 72 °C 30 s | 35 | 72 °C 10 min | [ | |
| EE2: GTCACTGACCCAACCTTAAATGGCTG | ||||||||||
| AB1f: CTCGTAGCTTGCTATGAGAAC | 551 | 94 °C 5 min | 94 °C 30 s | 55 °C 30 s | 72 °C 30 s | 40 | 72 °C 10 min | [ | ||
| AB1r: TCTCCCGGACTCCAGTCTG | ||||||||||
AMOf: GCTCCCTACTTGTTAGTGG AMOr: TTAGCTGAACAGGAATCTTG | 795 | 94 °C 5 min | 94 °C 30 s | 58 °C 30 s | 72 °C 1 min | 25 | 72 °C 7 min | [ | ||
| MSP4f: CAAGCAGAGAGACCTCGTAT | 584 | 94 °C 5 min | 94 °C 30 s | 57 °C 30 s | 72 °C 1 min | 36 | 72 °C 7 min | |||
| MSP4r: GGCTTTTGCTTCTCCGGG | ||||||||||
| MSP45: GGGAGCTCCTATGAATTACAGAGAATTGTTTAC | 852 | 95 °C 5 min | 95 °C 30 s | 57 °C 30 s | 72 °C 45 s | 36 | 72 °C 7 min | [ | ||
| MSP43: CCGGATCCTTAGCTGAACAGGAATCTTGC | ||||||||||
| acagltaf1:GCGATTTTAGAGTGYGGAGATTG | 1031 | 94 °C 5 min | 94 °C 45 | 55 °C 45 s | 72 °C 1 min | 25 | 72 °C 7 min | [ | ||
| acagltar1:TACAATACCGGAGTAAAAGTCAA | ||||||||||
| acagltaf2:TCATCTCCTGTTGCACGGTGCCC | 594 | 94 °C 5 min | 94 °C 45 s | 60 °C 45 s | 72 °C 1 min | 30 | 72 °C 7 min | |||
| acagltar2:CTCTGAATGAACATGCCCACCCT | ||||||||||
Rates of positivity for Anaplasma species in ticks grouped by sex and sampling location.
| Group | Anaplasma infection rate (%) | |||||
|---|---|---|---|---|---|---|
| Sampling location | Shaanxi | 0.57 (1/175) | 2.29 (4/175) | 10.29 (18/175) | 6.86 (12/175) | 0 (0/175) |
| Guizhou | 0.64 (1/156) | 28.85 (45/156) | 12.18 (19/156) | 14.10 (22/156) | 0 (0/156) | |
| Shanxi | 11.1 (1/9) | 0 (0/9) | 0 (0/9) | 0 (0/9) | 0 (0/9) | |
| Henan | 3.2 (1/31) | 0 (0/31) | 38.7 (12/31) | 12.9 (4/31) | 16.13 (5/31) | |
| Sex | Female | 1.66 (4/241) | 9.54 (23/241) | 11.20 (27/241) | 8.30 (20/241) | 2.07 (5/241) |
| Male | 0 (0/130) | 20.00 (26/130) | 16.92 (22/130) | 13.85 (18/130) | 0 (0/130) | |
| Total | 1.08 (4/371) | 13.21 (49/371) | 13.21 (49/371) | 10.24 (38/371) | 1.35 (5/371) | |
Co-infection rate of Anaplasma in H. longicornis.
| Pathogen | ||||||
|---|---|---|---|---|---|---|
| Mixed infection rate (%) | 2.7 (10/371) | 0.3 (1/371) | 2.7 (10/371) | 0.3 (1/371) | 0.3 (1/371) | 0.3 (1/371) |
Figure 2Phylogenetic relationship between 16S rRNA gene sequences of Anaplasma spp. Phylogenetic tree constructed based on partial 16S rRNA gene sequences of A. phagocytophilum and A. bovis using the Maximum likelihood method with the best evolutionary model and bootstrap analysis of 1000 replicates. The A. phagocytophilum like strain and A. bovis sequences obtained in this study are indicated by black diamonds and Black triangles, respectively. Values lower than 50% are hidden.
Figure 3Phylogenetic relationships between gene sequences of Anaplasma spp. Phylogenetic tree constructed based on partial msp4 gene sequences of A. ovis and A. marginale using the Maximum likelihood method with the best evolutionary model and bootstrap analysis of 1000 replicates. The A. ovis and A. marginale sequences obtained in this study are indicated by black squares and Black triangle, respectively. Values lower than 50% are hidden.
Figure 4Phylogenetic relationships between gltA gene sequences of Anaplasma spp. Phylogenetic tree based on partial gltA gene sequences of A. capra by using the Maximum likelihood method with the best evolutionary model and bootstrap analysis of 1000 replicates. Black circles indicate the sequences obtained in this study.