Thomas Hansen1,2,3, Pascal Vermeeren1, Lea de Jong1, F Matthias Bickelhaupt1,4, Trevor A Hamlin1. 1. Department of Theoretical Chemistry, Amsterdam Institute of Molecular and Life Sciences (AIMMS), Amsterdam Center for Multiscale Modeling (ACMM), Vrije Universiteit Amsterdam, De Boelelaan 1083, 1081 HV Amsterdam, The Netherlands. 2. Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands. 3. Departament de Química Inorgànica i Orgànica & IQTCUB, Universitat de Barcelona, 08028 Barcelona, Spain. 4. Institute for Molecules and Materials (IMM), Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
Abstract
We have quantum chemically explored the competition between the SN2 and SN2' pathways for X- + H2C═CHCH2Y (X, Y = F, Cl, Br, I) using a combined relativistic density functional theory and coupled-cluster theory approach. Bimolecular nucleophilic substitution reactions at allylic systems, i.e., Cγ═Cβ-Cα-Y, bearing a leaving-group at the α-position, proceed either via a direct attack at the α-carbon (SN2) or via an attack at the γ-carbon, involving a concerted allylic rearrangement (SN2'), in both cases leading to the expulsion of the leaving-group. Herein, we provide a physically sound model to rationalize under which circumstances a nucleophile will follow either the aliphatic SN2 or allylic SN2' pathway. Our activation strain analyses expose the underlying physical factors that steer the SN2/SN2' competition and, again, demonstrate that the concepts of a reaction's "characteristic distortivity" and "transition state acidity" provide explanations and design tools for understanding and predicting reactivity trends in organic synthesis.
We have quantum chemically explored the competition between the SN2 and SN2' pathways for X- + H2C═CHCH2Y (X, Y = F, Cl, Br, I) using a combined relativistic density functional theory and coupled-cluster theory approach. Bimolecular nucleophilic substitution reactions at allylic systems, i.e., Cγ═Cβ-Cα-Y, bearing a leaving-group at the α-position, proceed either via a direct attack at the α-carbon (SN2) or via an attack at the γ-carbon, involving a concerted allylic rearrangement (SN2'), in both cases leading to the expulsion of the leaving-group. Herein, we provide a physically sound model to rationalize under which circumstances a nucleophile will follow either the aliphatic SN2 or allylic SN2' pathway. Our activation strain analyses expose the underlying physical factors that steer the SN2/SN2' competition and, again, demonstrate that the concepts of a reaction's "characteristic distortivity" and "transition state acidity" provide explanations and design tools for understanding and predicting reactivity trends in organic synthesis.
Bimolecular
nucleophilic substitution reactions at allylic systems
bearing a leaving-group at the α-position give rise to a competition
between the aliphatic SN2 and allylic SN2′
reaction channels (Scheme ). For this class of substrates, the nucleophile, i.e., Lewis
base, can directly attack either the α-carbon (SN2) or the γ-carbon involving a concerted allylic rearrangement
(SN2′, also known as SN2 prime).[1] This intrinsic competition can result in unwanted
side products and hampers the applicability of these transformations
in synthetic chemistry. Nevertheless, in the last years, the SN2′ reaction has advanced into an important member of
the chemical toolbox of synthetic chemists. Especially, the copper-catalyzed
SN2′ reaction has become a key synthetic methodology
to forge new C–C bonds with good regio- and stereoselectivity.[2,3]
Scheme 1
SN2 and SN2′ Pathways for Reactants
X– + H2C=CHCH2Y (X,
Y = F, Cl, Br, I)
Both experimental[4] and theoretical studies[5] have provided insights into the SN2/SN2′
competition. In general, the aliphatic SN2 pathway is favored;
however, the allylic SN2′
can become dominant when an attack on the α-position is sterically
retarded. Following this, the use of model substrates such as H2C=CHCR2Y (e.g., R = alkyl group) presents
an almost exclusive preference for the SN2′ reaction.[6] Similarly, allylic rearrangements of propargylic
systems (Cγ≡Cβ–Cα–Y) conveniently furnish allenes.[7] Despite these advances, the physical phenomena governing
the preference of the SN2/SN2′ reaction
channels are currently lacking in the literature. This ultimately
thwarts the judicious tuning of the reactivity toward the desired
pathway.To this end, we have analyzed the reaction profiles
of the SN2, anti-SN2′,
and syn-SN2′ reaction pathways
of X– + H2C=CHCH2Y
with X, Y = F, Cl, Br,
I, using relativistic density functional theory (DFT). We have also
computed DLPNO-CCSD(T) reference data that confirm the reliability
of our DFT approach. The archetypal substrate H2C=CHCH2Y is an ideal model system to probe the competition between
SN2/SN2′ and derive the intrinsic underlying
physical factors and properties of the system that steer this competition.
This study equips us with a systematic overview of reactivity trends
over a wide range of reactivities and pathways, which can be extended
to any substrate where the allylic system and the leaving-group are
electronically coupled. The activation strain model (ASM)[8] of reactivity in conjunction with Kohn–Sham
molecular orbital (KS–MO) theory[9,10] were employed
to pinpoint the physical phenomena that control the competition between
the aliphatic SN2 and allylic SN2′ pathway
of the aforementioned reaction. In line with our previous work on
the SN2/E2 reaction,[11] the SN2/SN2′ competition could be traced back
to (i) the “characteristic distortivity” of the substrate,
which is directly connected with the “transition state acidity”
for each specific reaction pathway; (ii) the strength of the nucleophile,
i.e., Lewis base, which enters into an acid–base-like interaction
with the substrate; and (iii) the leaving-group capacity.
Results and Discussion
General
Trends in Reactivity
The computed reaction
profiles of all the SN2, anti-SN2, and syn-SN2′ reactions of X– + H2C=CHCH2Y with X,
Y = F, Cl, Br, and I at ZORA-M06-2X/QZ4P//ZORA-OLYP/QZ4P and (TightPNO)DLPNO-CCSD(T)/CBS(3,4/def2)//ZORA-OLYP/QZ4P
are collected in Table . In all cases, the reaction proceeds via a double-well potential
energy surface (PES), going from the reactant complex (RC) through
a transition state (TS) towards the product complex (PC), which may
ultimately dissociate into the separated products (P). Structural
data of the stationary points for two representative reactions are
shown in Figure .
Note that the overall activation energy ΔE‡, that is, the energy difference between the TS and
the infinitely separated reactants (X– and H2C=CHCH2Y), can be negative if a substantially
stabilized reactant complex is formed. For a more detailed discussion
on the various types of reaction potential energy surfaces, see, for
example, ref (12).
Importantly, the computed trends in reactivity at ZORA-M06-2X/QZ4P//ZORA-OLYP/QZ4P
agree well with those calculated at the more accurate (TightPNO)DLPNO-CCSD(T)/CBS(3,4/def2)//ZORA-OLYP/QZ4P
level (see Table ).
Table 1
Energies Relative to the Reactants
for All Stationary Points of the SN2, Anti-SN2′, and Syn-SN2′
Pathways Following X– + H2C=CHCH2Y → H2C=CHCH2X + Y– in kcal mol–1 a
Y
X–
species
F (a)
Cl (b)
Br (c)
I (d)
F– (1)
RC-SN2
–17.0
(−16.5)
–21.3
(−20.5)
–22.4
(−21.6)
–24.0
(−22.8)
RC-SN2′
–21.2
(−20.9)
–23.7
(−23.6)
–24.5
(−24.2)
–25.1
(−24.8)
TS-SN2
0.7
(−1.2)
–14.0
(−13.8)
–18.2
(−17.0)
–18.8
(−17.7)
TS-anti-SN2′
–6.8
(−4.1)
–13.0
(−11.8)
–13.4
(−11.5)
–13.5
(−11.7)
TS-syn-SN2′
–3.9
(−3.8)
–10.2
(−8.8)
–10.3
(−7.9)
–10.3
(−7.6)
PC-SN2
–17.0
(−16.5)
–45.9
(−44.8)
–53.6
(−52.3)
–60.2
(−55.1)
PC-SN2′
–21.2
(−20.9)
–48.5
(−47.2)
–55.8
(−54.2)
–61.9
(−56.7)
P
0.0
(0.0)
–38.1
(−36.4)
–46.9
(−42.2)
–54.9
(−49.3)
Cl– (2)
RC-SN2
–7.8
(−8.4)
–9.8
(−10.5)
–10.4
(−11.4)
–11.0
(−11.8)
RC-SN2′
–10.4
(−10.8)
–12.0
(−12.4)
–12.3
(−12.8)
–12.6
(−13.2)
TS-SN2
24.1
(22.6)
4.5
(4.9)
–0.8
(1.5)
–4.3
(−1.7)
TS-anti-SN2′
25.1
(24.6)
7.9
(10.6)
2.4
(7.2)
–1.3
(2.8)
TS-syn-SN2′
27.9
(27.6)
10.6
(13.8)
5.4
(10.1)
2.1
(6.0)
PC-SN2
16.8
(16.0)
–9.8
(−10.5)
–17.3
(−15.3)
–23.6
(−20.2)
PC-SN2′
14.4
(12.9)
–12.0
(−12.4)
–19.1
(−16.9)
–25.0
(−21.4)
P
38.1
(36.4)
0.0
(0.0)
–8.8
(−5.7)
–16.8
(−12.9)
Br– (3)
RC-SN2
–6.7
(−7.3)
–8.5
(−9.5)
–10.3
(−11.1)
–10.5
(−11.7)
RC-SN2′
–8.9
(−9.0)
–10.3
(−11.2)
–10.4
(−11.5)
–10.8
(−11.8)
TS-SN2
28.7
(25.2)
8.0
(7.2)
2.0
(3.8)
–1.7
(0.6)
TS-anti-SN2′
33.5
(30.7)
11.1
(12.9)
5.1
(9.2)
1.2
(5.9)
TS-syn-SN2′
36.6
(34.2)
14.2
(15.9)
8.2
(12.4)
4.5
(8.6)
PC-SN2
24.5
(20.6)
–1.5
(−5.4)
–10.4
(−11.4)
–15.1
(−14.9)
PC-SN2′
22.4
(18.0)
–3.6
(−7.0)
–10.4
(−11.5)
–16.4
(−15.9)
P
46.9
(42.2)
8.8
(5.7)
0.0
(0.0)
–8.0
(−7.1)
I– (4)
RC-SN2
–5.3
(−5.8)
–6.7
(−7.3)
–7.1
(−7.7)
–7.4
(−8.2)
RC-SN2′
–7.0
(−7.4)
–8.2
(−8.5)
–8.3
(−8.8)
–8.5
(−8.9)
TS-SN2
36.2
(31.6)
12.5
(11.1)
6.4
(7.8)
2.2
(4.9)
TS-anti-SN2′
41.4
(37.6)
15.6
(15.7)
9.3
(13.0)
5.0
(9.3)
TS-syn-SN2′
44.7
(41.7)
18.9
(18.9)
12.5
(15.7)
7.3
(11.0)
PC-SN2
30.9
(26.5)
5.9
(1.1)
–1.4
(−3.5)
–7.4
(−8.2)
PC-SN2′
29.9
(24.5)
4.2
(−0.4)
–2.8
(−4.7)
–8.5
(−8.9)
P
54.9
(49.3)
16.8
(12.9)
8.0
(7.1)
0.0
(0.0)
Computed at ZORA-M06-2X/QZ4P//ZORA-OLYP/QZ4P
and (TightPNO)DLPNO-CCSD(T)/CBS(3,4/def2)//ZORA-OLYP/QZ4P in parentheses
(see Scheme for designation
of species).
Figure 1
Structures
(in Å) of stationary points along the aliphatic
SN2 and allylic anti-SN2′
pathways of (a) F– + H2C=CHCH2F and (b) F– + H2C=CHCH2Cl, computed at ZORA-OLYP/QZ4P. Atom colors: carbon (gray),
hydrogen (white), fluorine (green), and chlorine (cyan).
Structures
(in Å) of stationary points along the aliphatic
SN2 and allylic anti-SN2′
pathways of (a) F– + H2C=CHCH2F and (b) F– + H2C=CHCH2Cl, computed at ZORA-OLYP/QZ4P. Atom colors: carbon (gray),
hydrogen (white), fluorine (green), and chlorine (cyan).Computed at ZORA-M06-2X/QZ4P//ZORA-OLYP/QZ4P
and (TightPNO)DLPNO-CCSD(T)/CBS(3,4/def2)//ZORA-OLYP/QZ4P in parentheses
(see Scheme for designation
of species).Several interesting
reactivity trends can be derived from the reaction
profiles (Table ).
In the first place, in line with experimental findings,[4] for most of the studied systems, except for X,
Y = F, there is a preference for the aliphatic SN2 pathway
(see also Figure a).[4] Second, of the two possible allylic SN2′ pathways, that is anti-SN2′
and syn-SN2′, the anti-SN2′ reaction pathway consistently goes with a
lower activation energy than the syn-SN2′ pathway (ΔΔE‡ = −2.3 to −3.4 kcal mol–1 for anti-SN2′ relative to syn-SN2′ using DFT) regardless of the nucleophile
and leaving-group combination. As such, we will limit further discussion
solely to the comparison between the anti-SN2′ and SN2 reaction pathways. Third, the activation
energy of all nucleophilic substitution reactions (SN2, anti-SN2′, and syn-SN2′) increases when a weaker, i.e., less basic, anionic
nucleophile X– is used going from F– to Cl– to Br– to I–. For example, the activation energy for the aliphatic SN2 pathway increases going from ΔE‡ = +0.7 to +24.1 to +28.7 to +36.2 kcal mol–1 upon
going from X– = F– to Cl– to Br– to I–, when Y = F is
the leaving-group. This is a manifestation of the reduced intrinsic
nucleophilicity along this series.[11] Interestingly,
our computations reveal that along the same series, the anti-SN2′ activation energy rises to a larger extent
than the SN2 activation energy, inducing a switch in the
preferred reaction pathway from anti-SN2′ when the nucleophile is F– to SN2 for nucleophiles Cl–, Br–,
and I– (ΔΔE‡ = +7.6, −1.1, −4.8, −5.3 kcal mol–1 for SN2 relative to anti-SN2′). Thus, in this series, the anti-SN2′ dominates for the more basic halide X– = F–, with an activation energy that is 7.6 kcal
mol–1 lower than that of the SN2 pathway,
whereas the SN2 pathway prevails for the heavier, less
basic halides, X– = Cl–, Br–, and I–. For the latter three nucleophiles,
regardless of the leaving-group Y, the SN2 pathway is always
preferred, which is a direct result of their lower basicity (vide infra).
Figure 6
Schematic summary of the SN2/SN2′
competition. (a) Reaction pathway preference for X– and H2C=CHCH2Y with X, Y = F, Cl, Br,
and I. (b) “Characteristic distortivity” (destabilizing)
and “transition state acidity” (stabilizing) of the
aliphatic SN2 and allylic SN2′ reaction
pathways, where the characteristic distortivity (deformation; red)
is always higher along the SN2′ pathway than the
SN2. However, this can be overcome using strong Lewis bases
(nucleophiles), by the corresponding transition state acidity (lower-lying
LUMO; green).
On the other hand, for any nucleophile
X–, varying
the leaving-group along Y = F, Cl, Br, and I significantly lowers
all nucleophilic substitution activation energies. For example, the
activation energy for the SN2 pathway decreases from ΔE‡ = +0.7 to −14.0 to −18.2
to −18.8 kcal mol–1 along Y = F, Cl, Br,
and I, respectively, using nucleophile X = F–. Importantly,
along the same series, the most favorable reaction pathway switches
from anti-SN2′ for Y = F to SN2 for Y = Cl, Br, and I, because the activation energy of
the latter reaction decreases more rapidly than that of the former
reaction (e.g., ΔΔE‡ = +7.6, −1.1, −4.8, −5.3 kcal mol–1 for SN2 relative to anti-SN2′; see Table ). In the next section, the origin of these reactivity trends is
further analyzed and rationalized on the basis of the activation strain
model (ASM)[8] of reactivity in combination
with quantitative Kohn–Sham molecular orbital (KS–MO)[9,10] theory.
Activation Strain Analyses
The results emerging from
utilizing the activation strain model (ASM) of reactivity for the
representative SN2 and anti-SN2′ reactions of X– and H2C=CHCH2Y (X, Y = F, Cl) are summarized in Figures –5 (see the
Supporting Information Figure S1 for all
activation strain diagrams). The ASM is a fragment-based approach
in which the potential energy surface (PES) can be described with
respect to, and understood in terms of, the characteristics of the
reactants, i.e., the nucleophile and substrate. This analysis method
decomposes the total electronic energy (ΔE)
into two distinct terms, that is, the strain energy (ΔEstrain) and the interaction energy (ΔEint). The strain energy is the penalty that
needs to be paid to deform the individual reactants to react and the
interaction energy accounts for all mutual interactions between the
deformed reactants along the entire reaction coordinate, in this case,
defined as the IRC projection onto the Cα···Y
stretch.[11,13] This is a critical reaction coordinate that
is intimately connected to the progress of nucleophilic substitution
reactions on going from the reactant complex to the transition state
to the product complex.
Figure 2
Activation strain analysis of the SN2 and anti-SN2′ reactions of X– and H2C=CHCH2Y with X,
Y = F, Cl, along the IRC
projected on the Cα···Cl bond stretch.
The (a, c) left column shows the influence of the nucleophile on the
PES, whereas the (b, d) right column shows the impact of the leaving-group
variation. Transition states are indicated with dots. Computed at
ZORA-M06-2X/QZ4P//ZORA-OLYP/QZ4P.
Figure 5
Schematic representation of the relation between the LUMO
energy
of the substrate and the characteristic distortivity. See Figure S2 for quantitative data on the relationship
between characteristic distortivity and electronic structure.
Activation strain analysis of the SN2 and anti-SN2′ reactions of X– and H2C=CHCH2Y with X,
Y = F, Cl, along the IRC
projected on the Cα···Cl bond stretch.
The (a, c) left column shows the influence of the nucleophile on the
PES, whereas the (b, d) right column shows the impact of the leaving-group
variation. Transition states are indicated with dots. Computed at
ZORA-M06-2X/QZ4P//ZORA-OLYP/QZ4P.In Figure , we
show how changing the anionic nucleophile X–, panels
(a) and (c), and the leaving-group Y, panels (b) and (d), affect the
reactivity of both the aliphatic SN2 and allylic SN2′ pathways. Changing the nucleophile from F– to Cl– leads, in line with its decreased basicity,
to a significant loss of stabilizing interaction energy between the
nucleophile and substrate, and hence results in an increase of the
activation energy (Figure a,c). The strain energy, in contrast, is hardly affected by
changing the strength of the nucleophile because it is mainly determined
by the strength of the Cα–Y bond, which remains
constant. Therefore, the strain energy is not responsible for the
reduced reactivity of the nucleophilic substitution reactions.A weaker nucleophile, i.e., going from F– to
the weaker Lewis base Cl–, results in a weakening
of the acid–base-like HOMOX–LUMOsubstrate interaction with the substrate over the entire course
of the reaction. This loss of HOMO–LUMO interaction originates
from the fact that the halide X– np atomic orbital (AO) decreases in energy from F– to I–, which, consequently, increases the corresponding
HOMOX–LUMOsubstrate orbital energy gap (Figure ; see ref (14) for a detailed discussion of the difference in the AO orbital energies
of halogen atoms and halide anions).
Figure 3
Schematic orbital interaction diagram
between the filled np HOMO of X– (X = I– to F–) and the LUMO
of H2C=CHCH2Y.
Schematic orbital interaction diagram
between the filled np HOMO of X– (X = I– to F–) and the LUMO
of H2C=CHCH2Y.In contrast, changing the leaving-group from Y = F to Cl promotes
both the SN2 and SN2′ reactivities by
reducing the destabilizing strain energy (Figure b,d). The interaction energy, however, does
not change upon altering the leaving-group and hence is not responsible
for the observed enhanced reactivity. The less destabilizing strain
originates directly from the weaker carbon–leaving-group bond
descending in Group 17 (i.e., halogens), rendering it easier to break,
thus requiring less energy.[15] Notably,
we recently found that when going down Group 17, the carbon–halogen
bond, i.e., carbon–leaving-group bond, does not become weaker
because of the decreasing electronegativity difference but, instead,
due to the increasing steric (Pauli) repulsion across the C–Y
bond for the larger halogen atoms.[16]To analyze the competition between SN2 and SN2′, we collect in Figure four panels showing the aliphatic SN2 and
allylic SN2′ pathways of the model reactions: (a)
F– + H2C=CHCH2F, (b)
F– + H2C=CHCH2Cl, (c)
Cl– + H2C=CHCH2F, and
(d) Cl– + H2C=CHCH2Cl. The nature of the nucleophile changes in the vertical direction,
whereas the leaving-group is altered in the horizontal direction.
Several characteristic trends for the SN2 (attack at the
σ*) and SN2′ (attack at the π*) pathways
can be derived from the computed activation strain diagrams (ASDs).
For all studied reactions, the aliphatic SN2 reaction pathway
goes with a lower strain energy than the allylic SN2′
analog (see also Figure S1). This difference
is the direct result of the required allylic rearrangement that occurs
only along the SN2′ pathway. During both reactions,
the Cα–Y bond is being broken; however, for
the SN2′ pathway, there is a concurrent reorganization
of the allylic backbone, going from H2Cγ=CβHCαH2···Y
to H2CγCβH=CαH2···Y. Resultingly, the “characteristic
distortivity” along the SN2 pathway is inherently
lower than along the corresponding SN2′ pathway.
Notably, we have observed a similar relationship between structural
deformation and reaction pathway when studying the SN2/E2
competition,[11] where the SN2
pathway (one bond-breaking event in the substrate) goes with intrinsically
less structural deformation, i.e., characteristic distortivity, than
the E2 pathway (two bond-breaking events in the substrate). Importantly,
the strain curves at the end of the nucleophilic substitution reactions,
thus close to the product complex, begin to converge to nearly the
same energy. This is because the product complexes of both the SN2 and SN2′ pathways are structurally similar.
Figure 4
Activation
strain analysis of the competition between SN2 (red) and anti-SN2′ (blue) reactions
of anionic X– and H2C=CHCH2Y with X, Y = F, Cl, along the IRC projected on the Cα···Cl bond stretch. (a–c, and
b–d) Trends in the vertical direction show the impact of the
different nucleophiles on the competition, whereas (a, b, and c, d)
trends in the horizontal direction show the influence of leaving-group
variation. Transition states are indicated with dots. Computed at
ZORA-M06-2X/QZ4P//ZORA-OLYP/QZ4P.
Activation
strain analysis of the competition between SN2 (red) and anti-SN2′ (blue) reactions
of anionic X– and H2C=CHCH2Y with X, Y = F, Cl, along the IRC projected on the Cα···Cl bond stretch. (a–c, and
b–d) Trends in the vertical direction show the impact of the
different nucleophiles on the competition, whereas (a, b, and c, d)
trends in the horizontal direction show the influence of leaving-group
variation. Transition states are indicated with dots. Computed at
ZORA-M06-2X/QZ4P//ZORA-OLYP/QZ4P.A same product molecule is formed and only the site at which the
leaving-group coordinates is different (see product complexes in Figure ). This phenomenon
of converging strain curves in the product complex contrasts with
the SN2/E2 competition, in which the E2 reaction features,
along the entire reaction pathway, an increasingly more destabilizing
strain energy, as it forms a PC composed of entirely different product
molecules than the SN2 reaction.[11]At the same time, the characteristic distortivity also has
a profound
effect on the electronic structure of the substrate (Figures and 6b).
In our reaction systems, a higher characteristic distortivity, i.e.,
more deformation of the substrate, gives rise to a lower-energy LUMO
in the substrate. The reason for this is that the LUMO of the substrate
has destabilizing antibonding character in the Cα–Y and Cγ=Cβ bonds
and stabilizing bonding character in the Cβ–Cα bond (Figure ). The elongation of the Cα–Y bond
found during both the SN2 and SN2′ reactions
reduces the antibonding overlap in this bond, resulting in a stabilization
of the LUMO orbital energy. Additionally, the allylic rearrangement
along the SN2′ pathway induces a stretch of the
Cγ=Cβ bond and a contraction
of the Cβ–Cα, which results
in less destabilizing antibonding character in the Cγ=Cβ bond and more bonding character in the
Cβ–Cα bond. Both geometrical
deformations lead to an additional stabilization of the LUMO of the
substrate during the SN2′ reaction. Note that at
the beginning of the reaction almost no deformation has taken place,
and hence the LUMO energy difference between the SN2 and
SN2′ is very small (Figure S2). Moreover, as previously discussed, the product complexes of both
the SN2 and SN2′ pathways are comparable
in structure, which causes the LUMO energies of the different reaction
pathways to converge at the end of the reaction. This will, as discussed
below, have direct implications on the observed reactivity trends
when the transition states appear to be very early or late on the
reaction coordinate.Schematic representation of the relation between the LUMO
energy
of the substrate and the characteristic distortivity. See Figure S2 for quantitative data on the relationship
between characteristic distortivity and electronic structure.Schematic summary of the SN2/SN2′
competition. (a) Reaction pathway preference for X– and H2C=CHCH2Y with X, Y = F, Cl, Br,
and I. (b) “Characteristic distortivity” (destabilizing)
and “transition state acidity” (stabilizing) of the
aliphatic SN2 and allylic SN2′ reaction
pathways, where the characteristic distortivity (deformation; red)
is always higher along the SN2′ pathway than the
SN2. However, this can be overcome using strong Lewis bases
(nucleophiles), by the corresponding transition state acidity (lower-lying
LUMO; green).Altogether, these findings allow
us to translate the interaction
energy emerging from our activation strain analyses, in analogy with
our previous work on the SN2/E2 competition,[11] into fundamental concepts that are intrinsically
based on the strength of the Lewis acid (substrate) and Lewis base
(nucleophile). It is well-known from acid–base chemistry that
a more basic Lewis base (high-energy HOMO) will interact more strongly
with a more acidic substrate (low-energy LUMO).[17] We, therefore, use the, previously introduced by us,[11] concept of “transition state acidity”,
that is, the effective acidity of a deformed substrate in the transition
state. As discussed earlier, the SN2 pathway goes with
a less acidic substrate (higher-energy LUMO) than the SN2′ pathway (lower-energy LUMO). Therefore, the SN2′ pathway can dominate the SN2 pathway in the
limit of a very strong interaction (stronger Lewis base), which we
have observed for the reactions in which X, Y = F (Figures a and 6a). Changing the nucleophile from X– = F– to Cl– has a profound effect on the preferred
reaction pathway, shifting the preference from SN2′
for F– (Figure a) to SN2 for Cl– (Figure c). This is a direct
consequence of the less stabilizing HOMO–LUMO interaction between
nucleophile and substrate as we go from the stronger base F– to the weaker base Cl–. The weaker interaction
in the case of the latter is no longer able to overcome the higher
strain associated with the higher characteristic distortivity along
the SN2′ pathway and hence results in a preference
for the SN2 pathway (Figure b). Likewise, for Y = Cl as leaving-group, going from
X = F– (Figure b) to X = Cl– (Figure d), the preference for SN2 increases
(ΔΔE‡ = −2.0
to −5.7 kcal mol–1 for SN2 relative
to anti-SN2′); however, since X
= F– follows already the SN2 pathway,
no switch in mechanism is observed. Note that, in the case of the
weaker nucleophile Cl–, the position of the transition
states shifts to a later point on the reaction coordinate because
of the less stabilizing and more shallow interaction curve. The occurrence
of the TS at a later stage of the reaction causes a smaller difference
in LUMO energy between the aliphatic SN2 and allylic SN2′ pathways and hence a smaller difference in “transition
state acidity” (see also Figure S2). On the other hand, increasing the leaving-group ability, from
Y = F to Cl (Figure a–d), shifts the position of the transition states to an early
position on the reaction coordinate, especially for the SN2′ pathway. At these early stages of the reaction, almost
no substrate deformation has taken place and hence no stabilization
of the LUMO. This, ultimately, yields no apparent difference in “transition
state acidity” between the pathways, and thus, we observe erosion
of the SN2′ preference shifting to the less distortive
SN2 pathway.Our model can also explain the effect
of solvation on the SN2 versus SN2′ competition.
The localized
charge density on the anionic nucleophile (Lewis base) is highly stabilized
upon solvation, which leads to a stabilization of the HOMO of X– (weaker nucleophile). Thus, the HOMO–LUMO interaction
(acid–base-like interaction) between the Lewis base and substrate
is weakened by solvation.[11c] The weaker
interaction ultimately causes a shift to the less distortive SN2 pathway. To showcase this fundamental effect, we have computed
the SN2 and anti-SN2′
activation barriers of all our systems with the inclusion of solvation
simulated with COSMO (dichloromethane). As expected, as a result of
solvation, all reaction barriers increase significantly and follow
the less distortive SN2 pathway (Table S2), which is a direct consequence of the weakening of the
Lewis-basic nucleophiles. For example, by going from the gas phase
to solution, the X, Y = F system switches from SN2′
to SN2. Note that these effects will be even more pronounced
when the polarity of the solvent increases.[11c]Lastly, we investigated the SN2/SN2′
competition of more commonly used nucleophiles MeO–, MeS–, MeSe–, and MeTe– with C2H5F as a substrate to test our model
(Table S3). As discussed earlier, strong
nucleophiles will have a more favorable interaction with the substrate
than weak nucleophiles and, therefore, the former will be able to
overcome the characteristic high distortivity accompanied with the
SN2′ reaction. Hence, based on the strength of the
nucleophile, which is associated with the energy of the HOMO, one
can anticipate the preferred reaction pathway. By going down a group
in the periodic table, the HOMO energy becomes stabilized, resulting
in a lower nucleophilicity along MeO–, MeS–, MeSe–, and MeTe–. As expected,
the SN2′ preference erodes on going from MeO– to MeS–, MeSe–, and MeTe– (ΔΔE‡ = +9.1, +6.1, +2.9, +1.6 kcal mol–1 for SN2 relative to anti-SN2′). The weakest nucleophile in this series still has a preference
for the SN2′ pathway as a result of the intrinsic
higher reactivity of Group 16 (chalcogens) compared to Group 17 (halogens)
in the periodic table.
Conclusions
Bimolecular nucleophilic
substitution at archetypal allylic substrates
X– + H2C=CHCH2Y (X,
Y = F, Cl, Br, I) can follow two distinct mechanistic pathways: aliphatic
SN2 or allylic SN2′ substitution. The
aliphatic SN2 pathway is in general favored over the allylic
SN2′ mechanism. For our studied systems, we found
that the latter only dominates in the case of a strong nucleophile
(X– = F–) in combination with
a poor leaving-group (Y = F). Both mechanistic pathways are accelerated
as the Lewis basicity of the anionic nucleophile increases, along
X– = I– to F–, and the carbon–leaving-group (C–Y) bond becomes weaker,
along Y = F to I. These and other insights emerge from our detailed
quantum chemical analyses based on relativistic DFT.Our activation
strain analyses reveal that a stronger, more Lewis-basic
nucleophile X– (e.g., going from Cl– to F–) lowers the activation energy for both the
SN2 and SN2′ pathways, because of a more
stabilizing acid–base-like HOMOX–LUMOsubstrate interaction with the substrate over
the entire course of the reaction. A leaving-group Y possessing a
weaker C–Y bond in the substrate (e.g., going from C–F
to C–Cl) also lowers the activation energy for both the SN2 and SN2′ pathways, because a less destabilizing
activation strain needs to be overcome to break such a weaker carbon–leaving-group
bond.In analogy to the previously studied SN2/E2
competition,[11] the propensity of the Lewis-basic
nucleophile
to follow an SN2 or SN2′ pathway is found
to be steered by the distinct structural deformation of the substrate
during the course of the reaction in combination with the nature of
the Lewis base and the leaving-group. The allylic SN2′
pathway (C–Y bond breaking and allylic rearrangement in the
substrate) is characterized by a higher “characteristic distortivity”
than the aliphatic SN2 pathway (only C–Y bond breaking
in the substrate). The higher characteristic distortivity of the SN2′ pathway is associated with a higher activation strain,
which contributes to the SN2′ activation energy
being higher than the SN2 one.But the higher distortivity
of the SN2′ pathway
also stabilizes the LUMO (lower-energy LUMO) of the substrate and
furnishes a substrate with an effectively higher TS acidity. In the
case of strong Lewis-basic nucleophiles (X– = F– in our case), this can lead to sufficiently stabilizing
HOMO–LUMO interaction between nucleophile and substrate that
can overcome the higher activation strain of the SN2′
pathway, making it the dominant mechanism over SN2. For
the weaker Lewis bases (X– = Cl–, Br–, I–), and thus also for
(strongly) solvated Lewis bases, the HOMO–LUMO interaction
is not strong enough to overcome the higher activation strain of the
allylic SN2′ pathway and, thus, the less distortive
aliphatic SN2 substitution emerges as the dominant pathway.
Our present work demonstrates the more general applicability of the
concepts of “characteristic distortivity” and “transition
state acidity” to not only explain but also predict reactivity
trends of fundamental organic reactions.
Computational
Methods
Computational Details
All density functional theory
(DFT) calculations were performed using the Amsterdam Density Functional
(ADF2018.105) software package.[18] The generalized
gradient approximation (GGA) exchange–correlation functional
OLYP was used for all geometry optimizations, which consists of the
optimized exchange (OPTX) functional proposed by Handy and co-workers[19a] and the Lee–Yang–Parr (LYP) correlation
functional.[19b] Our benchmark studies have
shown that OLYP gives accurate nucleophilic substitution stationary
point geometries.[20] Scalar relativistic
effects are accounted for using the zeroth-order regular approximation
(ZORA).[21] The basis set used, denoted QZ4P,
is of quadruple-ζ quality for all atoms and has been improved
by four sets of polarization functions.[22] This large basis set is required for small anionic species (e.g.,
F–). All solution-phase calculations used COSMO
to simulate bulk solvation. For these calculations, the optimized
stationary points in the gas phase were fully reoptimized at COSMO(DCM)-ZORA-OLYP/QZ4P.[23] The accuracies of the fit scheme (Zlm fit) and
the integration grid (Becke grid) were, for all calculations, set
to VERYGOOD.[24] No symmetry constraints
were used for all computations. All calculated stationary points have
been verified by performing a vibrational analysis calculation,[25] to be energy minima (no imaginary frequencies)
or transition states (only one imaginary frequency). The character
of the normal mode associated with the imaginary frequency of the
transition state has been inspected to ensure that it is associated
with the reaction of interest. The stationary point energies have
been refined by performing single points at ZORA-M06-2X[26]/QZ4P, using ADF,[18] as well as (TightPNO)DLPNO-CCSD(T)/CBS(3,4/def2),[27] using ORCA 5.0.1,[28] on the ZORA-OLYP/QZ4P
geometries. The potential energy surfaces of the studied bimolecular
nucleophilic substitution reactions were obtained by means of intrinsic
reaction coordinate (IRC) calculations, which confirmed the correct
transition state of interest.[29] The IRC
calculations were analyzed using the PyFrag 2019 program.[30] The optimized structures were illustrated using
CYLview.[31]
Activation Strain Model
of Reactivity
The activation
strain model (ASM) of chemical reactivity,[8] also known as the distortion/interaction model,[32] is a fragment-based approach in which the potential energy
surface (PES) can be described with respect to, and understood in
terms of the characteristics of, the reactants. It considers the rigidity
of the reactants and to which extent they need to deform during the
reaction, plus their capability to interact with each other as the
reaction proceeds. With the help of this model, we decompose the gas-phase
total energy, ΔE(ζ), into the strain
and interaction energy, ΔEstrain(ζ) and ΔEint(ζ), respectively,
and project these values onto the reaction coordinate ζ (eq ).In this equation,
the strain energy,
ΔEstrain(ζ), is the penalty
that needs to be paid to deform the reactants from their equilibrium
to the geometry they adopt during the reaction at the point ζ
of the reaction coordinate. On the other hand, the interaction energy,
ΔEint(ζ), accounts for all
of the chemical interactions that occur between these two deformed
reactants along the reaction coordinate. Note that at the position
along the reaction coordinate where the destabilization of the strain
terms increases with the same slope as the stabilization of the interaction
energy term increases, i.e., dΔEstrain(ζ)/dζ = −dΔEint(ζ)/dζ, the derivative of the total energy ΔE(ζ) with respect to the reaction coordinate is zero
(dΔE(ζ)/dζ = 0).[8] At this point, the reaction profile reaches either a maximum
(transition state) or a minimum (reactant complex or product complex).In the herein presented activation strain and accompanied energy
decomposition diagrams, the intrinsic reaction coordinate (IRC) is
projected onto the carbon–leaving-group (Cα···Y) distance. This critical reaction coordinate
undergoes a well-defined change during the reaction from the reactant
via the transition state to the product.[11,13]
Authors: Mirko Franchini; Pierre Herman Theodoor Philipsen; Erik van Lenthe; Lucas Visscher Journal: J Chem Theory Comput Date: 2014-04-23 Impact factor: 6.006
Authors: Pascal Vermeeren; Stephanie C C van der Lubbe; Célia Fonseca Guerra; F Matthias Bickelhaupt; Trevor A Hamlin Journal: Nat Protoc Date: 2020-01-10 Impact factor: 13.491
Authors: Trevor A Hamlin; Thomas Hansen; Pascal Vermeeren; F Matthias Bickelhaupt Journal: Angew Chem Int Ed Engl Date: 2021-06-04 Impact factor: 15.336