Literature DB >> 35737837

The nature of proton-coupled electron transfer in a blue light using flavin domain.

Zhongneng Zhou1, Zijing Chen1, Xiu-Wen Kang1, Yalin Zhou1, Bingyao Wang1, Siwei Tang1, Shuhua Zou1, Yifei Zhang1, Qiaoyu Hu2,3, Fang Bai2,3, Bei Ding1, Dongping Zhong1,4,5,6.   

Abstract

Proton-coupled electron transfer (PCET) is key to the activation of the blue light using flavin (BLUF) domain photoreceptors. Here, to elucidate the photocycle of the central FMN-Gln-Tyr motif in the BLUF domain of OaPAC, we eliminated the intrinsic interfering W90 in the mutant design. We integrated the stretched exponential function into the target analysis to account for the dynamic heterogeneity arising from the active-site solvation relaxation and the flexible H-bonding network as shown in the molecular dynamics simulation results, facilitating a simplified expression of the kinetics model. We find that, in both the functional wild-type (WT) and the nonfunctional Q48E and Q48A, forward PCET happens in the range of 105 ps to 344 ps, with a kinetic isotope effect (KIE) measured to be ∼1.8 to 2.4, suggesting that the nature of the forward PCET is concerted. Remarkably, only WT proceeds with an ultrafast reverse PCET process (31 ps, KIE = 4.0), characterized by an inverted kinetics of the intermediate FMNH˙. Our results reveal that the reverse PCET is driven by proton transfer via an intervening imidic Gln.

Entities:  

Keywords:  kinetic isotope effect; photoreceptors; proton rocking; proton-coupled electron transfer; stretched dynamics

Mesh:

Substances:

Year:  2022        PMID: 35737837      PMCID: PMC9245699          DOI: 10.1073/pnas.2203996119

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


  49 in total

Review 1.  Protein electron transfer: is biology (thermo)dynamic?

Authors:  Dmitry V Matyushov
Journal:  J Phys Condens Matter       Date:  2015-11-12       Impact factor: 2.333

Review 2.  Proton-coupled electron flow in protein redox machines.

Authors:  Jillian L Dempsey; Jay R Winkler; Harry B Gray
Journal:  Chem Rev       Date:  2010-11-17       Impact factor: 60.622

Review 3.  Free Energies of Proton-Coupled Electron Transfer Reagents and Their Applications.

Authors:  Rishi G Agarwal; Scott C Coste; Benjamin D Groff; Abigail M Heuer; Hyunho Noh; Giovanny A Parada; Catherine F Wise; Eva M Nichols; Jeffrey J Warren; James M Mayer
Journal:  Chem Rev       Date:  2021-12-20       Impact factor: 72.087

4.  Hydrogen bond switching among flavin and amino acid side chains in the BLUF photoreceptor observed by ultrafast infrared spectroscopy.

Authors:  Cosimo Bonetti; Tilo Mathes; Ivo H M van Stokkum; Katharine M Mullen; Marie-Louise Groot; Rienk van Grondelle; Peter Hegemann; John T M Kennis
Journal:  Biophys J       Date:  2008-08-15       Impact factor: 4.033

5.  Propensity for Proton Relay and Electrostatic Impact of Protein Reorganization in Slr1694 BLUF Photoreceptor.

Authors:  Joshua J Goings; Clorice R Reinhardt; Sharon Hammes-Schiffer
Journal:  J Am Chem Soc       Date:  2018-10-31       Impact factor: 15.419

6.  Molecular models predict light-induced glutamine tautomerization in BLUF photoreceptors.

Authors:  Tatiana Domratcheva; Bella L Grigorenko; Ilme Schlichting; Alexander V Nemukhin
Journal:  Biophys J       Date:  2008-02-08       Impact factor: 4.033

7.  Light-driven deracemization enabled by excited-state electron transfer.

Authors:  Nick Y Shin; Jonathan M Ryss; Xin Zhang; Scott J Miller; Robert R Knowles
Journal:  Science       Date:  2019-10-18       Impact factor: 47.728

Review 8.  Light-induced chromophore and protein responses and mechanical signal transduction of BLUF proteins.

Authors:  Tomotsumi Fujisawa; Shinji Masuda
Journal:  Biophys Rev       Date:  2017-12-12

9.  Proton-Coupled Electron Transfer Guidelines, Fair and Square.

Authors:  Robin Tyburski; Tianfei Liu; Starla D Glover; Leif Hammarström
Journal:  J Am Chem Soc       Date:  2021-01-06       Impact factor: 15.419

Review 10.  Molecular eyes: proteins that transform light into biological information.

Authors:  John T M Kennis; Tilo Mathes
Journal:  Interface Focus       Date:  2013-10-06       Impact factor: 3.906

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