Literature DB >> 35697017

A personalized deep learning denoising strategy for low-count PET images.

Qiong Liu1, Hui Liu2,3,4, Niloufar Mirian2, Sijin Ren2, Varsha Viswanath5, Joel Karp5, Suleman Surti5, Chi Liu1,2.   

Abstract

Objective. Deep learning denoising networks are typically trained with images that are representative of the testing data. Due to the large variability of the noise levels in positron emission tomography (PET) images, it is challenging to develop a proper training set for general clinical use. Our work aims to develop a personalized denoising strategy for the low-count PET images at various noise levels.Approach.We first investigated the impact of the noise level in the training images on the model performance. Five 3D U-Net models were trained on five groups of images at different noise levels, and a one-size-fits-all model was trained on images covering a wider range of noise levels. We then developed a personalized weighting method by linearly blending the results from two models trained on 20%-count level images and 60%-count level images to balance the trade-off between noise reduction and spatial blurring. By adjusting the weighting factor, denoising can be conducted in a personalized and task-dependent way.Main results.The evaluation results of the six models showed that models trained on noisier images had better performance in denoising but introduced more spatial blurriness, and the one-size-fits-all model did not generalize well when deployed for testing images with a wide range of noise levels. The personalized denoising results showed that noisier images require higher weights on noise reduction to maximize the structural similarity and mean squared error. And model trained on 20%-count level images can produce the best liver lesion detectability.Significance.Our study demonstrated that in deep learning-based low dose PET denoising, noise levels in the training input images have a substantial impact on the model performance. The proposed personalized denoising strategy utilized two training sets to overcome the drawbacks introduced by each individual network and provided a series of denoised results for clinical reading.
© 2022 Institute of Physics and Engineering in Medicine.

Entities:  

Keywords:  deep learning; low count PET; noise level disparity; personalized denoising

Mesh:

Year:  2022        PMID: 35697017      PMCID: PMC9321225          DOI: 10.1088/1361-6560/ac783d

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   4.174


  32 in total

1.  Denoising of PET images by combining wavelets and curvelets for improved preservation of resolution and quantitation.

Authors:  A Le Pogam; H Hanzouli; M Hatt; C Cheze Le Rest; D Visvikis
Journal:  Med Image Anal       Date:  2013-06-01       Impact factor: 8.545

2.  Dynamic PET image reconstruction utilizing intrinsic data-driven HYPR4D denoising kernel.

Authors:  Ju-Chieh Kevin Cheng; Connor Bevington; Arman Rahmim; Ivan Klyuzhin; Julian Matthews; Ronald Boellaard; Vesna Sossi
Journal:  Med Phys       Date:  2021-03-22       Impact factor: 4.071

3.  PET image denoising using unsupervised deep learning.

Authors:  Jianan Cui; Kuang Gong; Ning Guo; Chenxi Wu; Xiaxia Meng; Kyungsang Kim; Kun Zheng; Zhifang Wu; Liping Fu; Baixuan Xu; Zhaohui Zhu; Jiahe Tian; Huafeng Liu; Quanzheng Li
Journal:  Eur J Nucl Med Mol Imaging       Date:  2019-08-29       Impact factor: 9.236

4.  A combined PET/CT scanner for clinical oncology.

Authors:  T Beyer; D W Townsend; T Brun; P E Kinahan; M Charron; R Roddy; J Jerin; J Young; L Byars; R Nutt
Journal:  J Nucl Med       Date:  2000-08       Impact factor: 10.057

5.  Ultralow dose computed tomography attenuation correction for pediatric PET CT using adaptive statistical iterative reconstruction.

Authors:  Samuel L Brady; Barry L Shulkin
Journal:  Med Phys       Date:  2015-02       Impact factor: 4.071

6.  Ultrasound Speckle Reduction Using Wavelet-Based Generative Adversarial Network.

Authors:  Hee Guan Khor; Guochen Ning; Xinran Zhang; Hongen Liao
Journal:  IEEE J Biomed Health Inform       Date:  2022-07-01       Impact factor: 7.021

Review 7.  An overview of PET neuroimaging.

Authors:  Ilya Nasrallah; Jacob Dubroff
Journal:  Semin Nucl Med       Date:  2013-11       Impact factor: 4.446

Review 8.  Clinical applications of PET in oncology.

Authors:  Eric M Rohren; Timothy G Turkington; R Edward Coleman
Journal:  Radiology       Date:  2004-03-24       Impact factor: 11.105

9.  Benefit of Improved Performance with State-of-the Art Digital PET/CT for Lesion Detection in Oncology.

Authors:  Suleman Surti; Varsha Viswanath; Margaret E Daube-Witherspoon; Maurizio Conti; Michael E Casey; Joel S Karp
Journal:  J Nucl Med       Date:  2020-03-20       Impact factor: 11.082

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