Literature DB >> 35694357

Synthesis of unsymmetrically tetrasubstituted pyrroles and studies of AIEE in pyrrolo[1,2-a]pyrimidine derivatives.

Taian Li1,2, Mong-Feng Chiou2, Yajun Li2, Changqing Ye2, Min Su2,3, Mengyu Xue2, Xiaobin Yuan1,2, Chuanchuan Wang2, Wen-Ming Wan2, Daliang Li1, Hongli Bao2,3.   

Abstract

Pyrroles are among the most important heterocycles in pharmaceuticals and agrochemicals. Construction of pyrrole scaffolds with different substituents and a free NH group, however, is challenging. Herein, a metal-free method for the synthesis of unsymmetrically tetrasubstituted NH-pyrroles using a consecutive chemoselective double cyanation is reported. The desired pyrroles were obtained with yields up to 99% and good functional group tolerance. Mechanistic studies identified a reaction mechanism that features a subtle sequence of first cyano-addition and migration, followed by cyano-addition and aromatization to afford the pyrrole skeleton. Pyrrolo[1,2-a]pyrimidines are synthesized as the synthetic applications of NH-pyrroles, and these pyrrolo[1,2-a]pyrimidines exhibit unpredicted time-dependent aggregation-induced emission enhancement (AIEE) properties. This journal is © The Royal Society of Chemistry.

Entities:  

Year:  2022        PMID: 35694357      PMCID: PMC9116286          DOI: 10.1039/d2sc00837h

Source DB:  PubMed          Journal:  Chem Sci        ISSN: 2041-6520            Impact factor:   9.969


Introduction

As one of the major challenges and driving forces for the development of innovative pharmaceuticals and agrochemicals, efficient construction of structurally diverse and highly functionalized heterocycles has long been a highly cited research field.[1] As prevalent key motifs in bioactive natural molecules, pyrrole and its derivatives have diverse applications in therapeutically active compounds, such as the heavily used drugs, lipitor, sutent, and molindone (Fig. 1a).[2] As core structures, these valuable polysubstituted pyrroles show that production of polysubstituted pyrrole scaffolds, especially with unsymmetrically disposed substituents and diverse functional groups, is highly sought.
Fig. 1

Pharmaceutically significant pyrroles and synthesis of heteroarenes from α,β-unsaturated sulfonimines.

Classically, pyrroles can be synthesized by the Paal–Knorr reaction[3] or the Hantzsch reaction.[4] Many other syntheses of pyrroles have been established,[5] including powerful coupling strategies realized by transition-metals[5] and the van Leusen pyrrole synthesis.[6] However, the major disadvantages of these protocols lie in their requirement for substrate pre-functionalization, substituent deficiency and formation of by-products. Synthesis of pyrrole scaffolds with unsymmetrical tetrasubstituents[7] can be considerably difficult, and it is even more challenging to obtain polysubstituted pyrroles with an unprotected free NH group, so called NH-pyrroles.[8] Examples such as the base-catalyzed cyclization of propargyl enamines by Wan's group,[9] the rhodium-catalyzed tandem reaction of α-diazo oxime ethers by Park et al.,[10] a visible-light-induced formal [3 + 2] cycloaddition by Xiao et al.[11] and an electrochemical heterocoupling between two structurally diverse enamines reported by Roy and De Sarkar[12] have disclosed excellent methods with which to synthesize polysubstituted NH-pyrroles. Nevertheless, only carbon substituents can be introduced into pyrroles with these methods, and procedures for the generation of NH-pyrroles with diverse functionalities are extremely rare. On the basis of the widely used synthesis of commercially available chalcones,[13] we have developed an efficient method for the synthesis of polysubstituted NH-pyrroles directly from α,β-unsaturated sulfonimines, which have been shown by Loh,[14] Smith,[15] and Yoshikai[16] to be good precursors for the construction of multisubstituted pyridines (Fig. 1b). Judging by the proposed mechanism, an interesting consecutive chemo-selective double cyanation should be important in this strategy. This reaction provides access to unsymmetrically tetrasubstituted pyrroles and tolerates functional groups, such as a free NH group that can be further substituted (Fig. 1c). In addition, the pyrrolo[1,2-a]pyrimidine derivatives that were synthesized from NH-pyrroles exhibit unpredicted time-dependent aggregation-induced emission enhancement (AIEE) properties. The initial screening and optimization of this pyrrole synthesis was carried out with an α,β-unsaturated sulfonimine (1s) as the model substrate and TMSCN. As shown in Table 1, the desired tetrasubstituted NH-pyrrole (1) can be easily generated when the reaction was performed in DMF at 80 °C with Cs2CO3 as the base (Table 1, entry 1). Screening of other alternative inorganic or organic bases showed that Cs2CO3 gave the best results (Table 1, entries 2 and 3 vs. entry 1). Decreasing or increasing the reaction temperature resulted in a lower yield (Table 1, entries 4 and 5). When anhydrous DMSO was used as the solvent, the best isolated yield of the NH-pyrrole (1) was 80% (Table 1, entry 6). While other solvents fail to improve the efficiency of the reaction, protic EtOH completely terminated the reaction (Table 1, entries 7 and 8). In the absence of a base, no reaction occurred (Table 1, entry 9), and finally, when the Bs (PhSO2) protecting group was replaced by a toluene sulfonyl group (Ts), the NH-pyrrole (1) was obtained in 73% yield (Table 1, entry 10). Other cyanide sources[17] such as Zn(CN)2, K3[Fe(CN)6] and BuCN have been studied, but only Zn(CN2) could afford the target molecule in 41% yield.

Reaction optimizationa

EntryBaseSolventTemp (°C)Yieldb (%)
1Cs2CO3DMF8068
2K2CO3, Na2CO3, t-BuONa, or KFDMF8017–43c
3TEA, DBU, DMAP, or DABCODMF800–29d
4Cs2CO3DMF7047
5Cs2CO3DMF8562
6Cs2CO3DMSO8082 (80)e
7Cs2CO3DMAc, MeCN, NMP, 1,4-dioxane, or THF8018–57f
8Cs2CO3EtOH800
9DMSO800
10Cs2CO3DMSO8073g
11Cs2CO3DMSO8041h
12Cs2CO3DMSO800i
13Cs2CO3DMSO800j

Reaction conditions: sulfonimine 1s (0.2 mmol, 1 equiv.), TMSCN (2.2 equiv.), base (2 equiv.), anhydrous solvent (1.5 mL), 80 °C, 12 h, under a nitrogen atmosphere.

Yields were determined by GC-MS analysis of the crude product using 1,4-dimethoxybenzene as an internal standard.

Yields with K2CO3, Na2CO3, t-BuONa, and KF were 43%, 17%, 32%, and 37%, respectively.

Yields with TEA, DBU, DMAP, and DABCO were 4%, 29%, trace, and 12%, respectively.

Isolated yield in parentheses.

Yields with DMAc, MeCN, NMP, 1,4-dioxane, and THF were 49%, 57%, 29%, 18% and 45%, respectively.

N-((1E,2E)-1,3-Diphenylallylidene)-4-methylbenzenesulfonamide was used instead of 1s (Bs was replace by Ts).

ZnCN2 was used instead of TMSCN.

K3Fe(CN)6 was used instead of TMSCN.

BuCN was used instead of TMSCN.

Reaction conditions: sulfonimine 1s (0.2 mmol, 1 equiv.), TMSCN (2.2 equiv.), base (2 equiv.), anhydrous solvent (1.5 mL), 80 °C, 12 h, under a nitrogen atmosphere. Yields were determined by GC-MS analysis of the crude product using 1,4-dimethoxybenzene as an internal standard. Yields with K2CO3, Na2CO3, t-BuONa, and KF were 43%, 17%, 32%, and 37%, respectively. Yields with TEA, DBU, DMAP, and DABCO were 4%, 29%, trace, and 12%, respectively. Isolated yield in parentheses. Yields with DMAc, MeCN, NMP, 1,4-dioxane, and THF were 49%, 57%, 29%, 18% and 45%, respectively. N-((1E,2E)-1,3-Diphenylallylidene)-4-methylbenzenesulfonamide was used instead of 1s (Bs was replace by Ts). ZnCN2 was used instead of TMSCN. K3Fe(CN)6 was used instead of TMSCN. BuCN was used instead of TMSCN. With the optimized conditions in hand, we explored the substrate scope and the limitations of the reaction. As shown by the results in Fig. 2, the reaction exhibits good functional group compatibility, and a variety of unsymmetrically tetrasubstituted NH-pyrroles can be obtained from α,β-unsaturated sulfonimines. Electron-donating substituents at the para-position of the aryl group (the CC side) are well-tolerated and give the corresponding products (1–4) in yields of 67–91%. The reaction proceeds smoothly with weak electron-withdrawing substituents, leading to the desired pyrroles (5–7, 10) in yields ranging from 72 to 96%. Compounds with ortho- and meta-methoxy substituents afford 9 and 11, respectively, in high yields. For substrates with a disubstituted aryl group, the reaction affords the corresponding pyrroles (12–14) in good to excellent yields. In addition to compounds with a phenyl ring, other aryl substituents are also tolerated. For example, naphthyl, pyrenyl, and thienyl groups are entirely compatible, leading to reactions which can convert the substrates into the corresponding NH-pyrroles (15–17) in excellent yields. Interestingly, when the C2-symmetric substrate, N-((1E,2E)-1,3-diphenylallylidene)benzene-sulfon-amide (18s) is employed in the reaction, both sides of the α,β-unsaturated sulfonimine moiety are involved in the formation of the pyrrole skeleton, and the reaction provides a C2-symmetric product (18) with two pyrrole substituents in 80% yield. However, when the R1 group is an alkyl group (Me and Bu), the desired NH-pyrrole (19, 20) was not detected. The structure of the NH-pyrrole (2) was confirmed by X-ray single crystal diffraction analysis.
Fig. 2

Substrate scope of carbon substituents. Reaction conditions: sulfonimine (0.5 mmol, 1 equiv.), TMSCN (2.2 equiv.), Cs2CO3 (2 equiv.), anhydrous DMSO (4 mL), 80 °C, 12 h, under a nitrogen atmosphere. TMSCN (4.4 equiv.) and Cs2CO3 (4 equiv.) were used instead.

Subsequently, the scope of another substituent on the CN side of the α,β-unsaturated sulfonimines was explored (Fig. 3). Substrates with electron-rich substituents (21s–24s) and electron-deficient substituents (25s–29s) at the para-position of the aromatic ring afforded the corresponding unsymmetrically tetra-substituted NH-pyrroles (21–29) in yields of 75–99%. While substrates with a 3-chlorophenyl substituent (30s) afford the desired product in 69% yield, 3,5-dimethylphenyl (31s) and 4-fluoro-3-methylphenyl (32s) substituents are also well tolerated. Bis(4-(methylthio)phenyl (33)) and dinaphthyl (34) NH-pyrroles with the same substituents at the CC or the CN side could be obtained in good yield. When R2 is cyclopropyl, the corresponding product 35 can be obtained with 43% yield. However, when R2 is hydrogen and methyl, no trace of the corresponding NH-pyrrole (36, 37) is detected.
Fig. 3

Substrate scope of substituents on the CN side. Reaction conditions: sulfonimine (0.5 mmol, 1 equiv.), TMSCN (2.2 equiv.), Cs2CO3 (2 equiv.), anhydrous DMSO (4 mL), 80 °C, 12 h, under a nitrogen atmosphere.

Unexpectedly, distinct from the reaction with diaryl-substituted α,β-unsaturated sulfonimines, a substrate with a tert-butyl group next to the CN bond (38s) afforded only the 1,2-cyano addition product (38) in 73% yield (eqn (1)), presumably as a result of the considerable steric hindrance.[18] This result suggested that this reaction might entail an initial 1,2-addition step. In order to gain some insight into the mechanism of the reaction, several control experiments were conducted (Fig. 4). First, when the reaction of 8s was conducted at rt, the 1,2-cyano addition product (39) was generated almost quantitatively in 2 min (Fig. 4a), a result similar to that obtained with substrate 38s.[18] A reasonable hypothesis is that the reaction at rt of an α,β-unsaturated sulfonimine and TMSCN might undergo 1,2-addition to afford the corresponding cyano sulfonamide. Second, upon subjecting 39 to the standard conditions (with 1.2 equiv. of TMSCN), the corresponding NH-pyrrole (8) was isolated in 55% yield (Fig. 4b). Even in the absence of TMSCN, the cyano sulfonamide (39) can be converted into the NH-pyrrole (8) (Fig. 4c), implying that the 1,2-addition of the cyano group is reversible at higher temperatures.
Fig. 4

Experimental and theoretical studies on the reaction mechanism.

Theoretical studies have also been conducted on the basis of the experimental results to investigate the reaction mechanisms of cyclization and double cyanation. Density functional theory (DFT) calculations were performed at the B3LYP-D3(SMD)/Def2-TZVP//B3LYP-D3/Def2-SVP level of theory. Since the reaction can be carried out starting from 39 without additional TMSCN but with much lower yields, the calculation of reversible CN elimination from 1SP was initially considered. Deprotonation of 1SP should be an easy process under the base reaction conditions, and the intermediate 1A can then eliminate the cyanide ion viaTS1 with a barrier of 13.3 kcal mol−1 to afford 1s (Fig. 4d). The isolated CN− ion therefore can add onto the carbon C4 of 1s to deliver the intermediate 1B through the transition state TS2, however, with a slightly higher barrier of 23.0 kcal mol−1, indicating that there may be a competition between 1,2- and 1,4-addition of 1s to reverse to the 1SP or forward to the pyrrole without external TMSCN at high temperature. Several plausible pathways starting from intermediate 1B have been examined (see the ESI for more details), and the rearranged intermediate int1 with a relative free enthalpy −3.6 kcal mol−1 was found to be the more favorable conformation than 1B. Then, int1 can undergo the desulfurization rather than the second CN− addition to afford int2via the transition state TS3 with a barrier of 14.5 kcal mol−1. Next, the transition state of cyclization, TS4, was found to be a much lower state along the reaction pathway than that of TS12 (the second CN− addition). Finally, the annulated intermediate int3 then should perform the proton transfer to afford intermediate int4 with a free enthalpy of −17.5 kcal mol−1. The second cyanide then can add onto int4via the transition state TS5 to deliver the intermediate int5 which will rearrange to the aromatic conformer int6 with a much stable free energy of −20.2 kcal mol−1. On the basic of these mechanistic studies, a plausible reaction mechanism was proposed and is shown in Fig. 5. Initially, a first cyanation occurs on the imine moiety to generate the cyano sulfonamide A.[18] Upon heating, elimination of the cyano group from A takes place,[19] regenerating the α,β-unsaturated sulfonimine, which will undergo 1,4-Michael addition to afford B. Intermediate B undergoes proton transfer and then deprotects the sulfone group to form intermediate D. Then, intramolecular 5-exo-dig cyclization provides an intermediate E which undergoes a second cyanation to offer intermediate F. Finally, the thermodynamically stable NH-pyrrole is formed by aromatization and protonation.
Fig. 5

Proposed mechanism.

The synthetic value of the unsymmetrically tetrasubstituted NH-pyrroles was demonstrated by the construction of various multisubstituted pyrrolo[1,2-a]pyrimidines. As shown in Fig. 6, a wide range of fused aza-arenes (40–51) can be developed from the NH-pyrroles and diketones.
Fig. 6

Construction of AIE-active multisubstituted pyrrolo[1,2-a]pyrimidines. AIEE. AIE.

As known from the literature, pyrrole-containing fluorescent materials generally exhibit aggregation-caused quenching characteristics. Surprisingly, these pyrrole-containing materials exhibit AIE properties, and a remarkable fluorescence enhancement phenomenon was observed for most of these pyrrolo[1,2-a]pyrimidines in a mixed THF/water solvent (Fig. 7).[20] For example, following the pioneering AIE studies by Tang et al.,[21] the fluorescence intensity of compound 40 was measured and found to be slightly reduced before fw (water fraction) reached 60%. A sudden rise in fluorescence intensity occurred when fw increased from 80% to 95%, indicating an AIE behaviour. Unexpectedly, it was found that the fluorescence generated by aggregation continued to increase with time. In order to gain insight into this unusual phenomenon, several carefully designed experiments were performed. First, when the aggregate in THF/water (10 : 90) solution was irradiated or kept in the dark for the same period of time, similar fluorescence intensities were obtained, indicating that an unexpected radiation time-dependent fluorescence enhancement had occurred. Further studies revealed that irradiation has very little effect on the intensity enhancement, and temperature was a minor factor. Second, upon photoactivation, the fluorescence lifetime of the THF/water (10 : 90) solution of 40 was prolonged from 3.529 ns to 9.966 ns. It was also shown that a solution in THF (0.1 mg mL−1) of compound 40 emitted green light with a maximum at 511 nm and a low fluorescence quantum yield,[22] but the efficiencies of its solution in THF/water (10 : 90) and its crystal form reach 40% and 36%, respectively. Interestingly, the fluorescence of the THF/water solution of 47–51 is not time independent, which is thus different from 40. To investigate this difference, single crystal structures of these compounds were studied. As depicted in Fig. 7, a face-to-tail pyrrolo[1,2-a]pyrimidine stacking mode is present in crystals of 40, 41, 42, 43, and 45 and absent for 47, 49 and 50. Molecular packing in single crystals of 40 is shown in Fig. 7h as an example of face-to-tail packing of pyrrolo[1,2-a]pyrimidines. This trend is consistent with the AIE or AIEE properties. Interestingly, a π–π interaction of the naphthalene rings is found in crystalline 49. The different single crystal packing models of 40 and 49 might be responsible for the distinction in the fluorescence phenomena. So, the multisubstituted pyrrolo[1,2-a]pyrimidines represent a new kind of AIE luminogens with an unusual time-dependent fluorescence enhancement.
Fig. 7

(a) The emission intensity at 518 nm of 40 in THF/water mixtures (0.1 mg mL−1) with different fw. (b) Time-dependent photoluminescence (PL) spectra in THF/water mixtures (fw = 90%, 0.2 mg mL−1). (c) Control experiment; fluorescence intensity at 437 nm light for 5 min (pink line) and in the dark for 5 min (green line); (d) transient photoluminescence decay spectra in THF and water mixtures (fw = 90%, 0.1 mg mL−1) freshly prepared (black line) and after 30 min (red line); λex = 437 nm. (e) Fluorescence quantum yield of THF and water mixtures (fw = 90%, 0.1 mg mL−1) (I) freshly prepared and (II) after 30 min, THF solution (0.1 mg mL−1) (III), solid powder (IV) and crystal particles (V). (f) XRD spectra of 40 powder, prepared by centrifugation of the THF and water mixtures (fw = 90%, 0.1 mg mL−1); (g) molecular packing in single crystals of 40, and (h) molecular packing in single crystals of 49.

Conclusions

We have developed an efficient transition metal-free approach to the synthesis of a variety of unsymmetrically tetrasubstituted NH-pyrroles from chalcone derivatives. A consecutive double cyanation of α,β-unsaturated sulfonimines followed by aromatization is proposed as a plausible pathway. The feasible conversion of the kinetic intermediate into the corresponding thermodynamically stable NH-pyrrole might be the key to the success of this method. Pyrrolo[1,2-a]pyrimidines are synthesized as examples of synthetic applications of NH-pyrroles and these pyrrolo[1,2-a]pyrimidines exhibit unpredicted time-dependent aggregation-induced emission enhancement properties.

Data availability

All experimental and characterization data, as well as DFT calculation data are available in the ESI.†

Author contributions

H. Bao, D. Li and W.-M. Wan directed the investigations. H. Bao and Y. Li prepared the manuscript. T. Li and C. Ye performed the synthetic experiments and analyzed the experimental data. M.-F. Chiou completed the theoretical calculations. M. Su, M. Xue, X. Yuan and C. Wang performed the synthetic experiments. T. Li and M.-F. Chiou contributed equally.

Conflicts of interest

There are no conflicts to declare.
  54 in total

Review 1.  Synthesis of pyrrole and carbazole alkaloids.

Authors:  Ingmar Bauer; Hans-Joachim Knölker
Journal:  Top Curr Chem       Date:  2012

Review 2.  Stimuli-Responsive AIEgens.

Authors:  Jing Zhang; Benzhao He; Yubing Hu; Parvej Alam; Haoke Zhang; Jacky W Y Lam; Ben Zhong Tang
Journal:  Adv Mater       Date:  2021-06-17       Impact factor: 30.849

Review 3.  Chalcone: A Privileged Structure in Medicinal Chemistry.

Authors:  Chunlin Zhuang; Wen Zhang; Chunquan Sheng; Wannian Zhang; Chengguo Xing; Zhenyuan Miao
Journal:  Chem Rev       Date:  2017-05-10       Impact factor: 60.622

4.  Ruthenium-catalyzed pyrrole synthesis via oxidative annulation of enamides and alkynes.

Authors:  Bin Li; Nuancheng Wang; Yujie Liang; Shansheng Xu; Baiquan Wang
Journal:  Org Lett       Date:  2012-12-12       Impact factor: 6.005

5.  From Aryl Iodides to 1,3-Dipoles: Design and Mechanism of a Palladium Catalyzed Multicomponent Synthesis of Pyrroles.

Authors:  Gerardo M Torres; Jeffrey S Quesnel; Diane Bijou; Bruce A Arndtsen
Journal:  J Am Chem Soc       Date:  2016-06-03       Impact factor: 15.419

6.  Expedient synthesis of highly substituted pyrroles via tandem rearrangement of α-diazo oxime ethers.

Authors:  Yaojia Jiang; Wei Chuen Chan; Cheol-Min Park
Journal:  J Am Chem Soc       Date:  2012-02-22       Impact factor: 15.419

7.  Potassium Acetate-Catalyzed Double Decarboxylative Transannulation To Access Highly Functionalized Pyrroles.

Authors:  Jun-Kuan Li; Biying Zhou; Yu-Chen Tian; Chunman Jia; Xiao-Song Xue; Fa-Guang Zhang; Jun-An Ma
Journal:  Org Lett       Date:  2020-12-01       Impact factor: 6.005

8.  Visible-light-induced formal [3+2] cycloaddition for pyrrole synthesis under metal-free conditions.

Authors:  Jun Xuan; Xu-Dong Xia; Ting-Ting Zeng; Zhu-Jia Feng; Jia-Rong Chen; Liang-Qiu Lu; Wen-Jing Xiao
Journal:  Angew Chem Int Ed Engl       Date:  2014-04-11       Impact factor: 15.336

Review 9.  Phenylpyrroles: 30 Years, Two Molecules and (Nearly) No Resistance.

Authors:  Jaafar Kilani; Sabine Fillinger
Journal:  Front Microbiol       Date:  2016-12-16       Impact factor: 5.640

10.  Direct synthesis of pentasubstituted pyrroles and hexasubstituted pyrrolines from propargyl sulfonylamides and allenamides.

Authors:  Changqing Ye; Yihang Jiao; Mong-Feng Chiou; Yajun Li; Hongli Bao
Journal:  Chem Sci       Date:  2021-06-08       Impact factor: 9.825

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.