| Literature DB >> 35622463 |
Chengju Zhang1, Qinghe Huang2, Fuyun He2.
Abstract
BACKGROUND: Long noncoding RNA small nucleolar RNA host gene 16 (lnc-SNHG16) regulates sepsis-induced acute lung injury and inflammation, which is involved in the pathophysiology of acute respiratory distress syndrome (ARDS). The present study intended to explore the role of lnc-SNHG16 as a potential biomarker indicating ARDS risk, disease severity, inflammation, and mortality in sepsis.Entities:
Keywords: acute respiratory distress syndrome; disease severity; lnc-SNHG16; mortality; sepsis
Mesh:
Substances:
Year: 2022 PMID: 35622463 PMCID: PMC9280012 DOI: 10.1002/jcla.24516
Source DB: PubMed Journal: J Clin Lab Anal ISSN: 0887-8013 Impact factor: 3.124
Clinical characteristics
| Items | Sepsis patients ( |
|---|---|
| Demographics | |
| Age (years), mean ± SD | 59.5 ± 5.7 |
| Gender, | |
| Female | 62 (38.8) |
| Male | 98 (61.2) |
| BMI (kg/m2), mean ± SD | 23.4 ± 3.3 |
| Smoke, | 51 (31.9) |
| Drink, | 59 (36.9) |
| Medical history | |
| History of hypertension, | 60 (37.5) |
| History of hyperlipidemia, | 25 (15.6) |
| History of diabetes, | 20 (12.5) |
| History of CKD, | 13 (8.1) |
| History of CCVD, | 32 (20.0) |
| History of asthma, | 11 (6.9) |
| History of COPD, | 17 (10.6) |
| Disease characteristics | |
| Primary infection site, | |
| Abdominal infection | 61 (38.1) |
| Respiratory infection | 40 (25.0) |
| Skin and soft tissue infection | 22 (13.8) |
| Other infections | 37 (23.1) |
| Primary organism, | |
| G− bacteria | 83 (51.9) |
| G+ bacteria | 41 (25.6) |
| Fungus | 14 (8.8) |
| Others | 25 (15.6) |
| Total culture negative | 25 (15.6) |
| APACHE II score, mean ± SD | 13.0 ± 6.1 |
| SOFA score, mean ± SD | 4.5 ± 2.0 |
| Laboratory detection | |
| Scr (mg/dL), median (IQR) | 1.8 (1.3–2.8) |
| Albumin (g/L), median (IQR) | 24.5 (18.2–33.0) |
| WBC (109/L), median (IQR) | 20.0 (13.4–28.3) |
| CRP (mg/L), median (IQR) | 72.6 (44.3–102.5) |
| TNF‐α (pg/ml), median (IQR) | 140.3 (102.1–195.5) |
| IL‐6 (pg/ml), median (IQR) | 65.0 (52.0–92.3) |
Abbreviations: APACHE II, Acute Physiology and Chronic Health Evaluation II; BMI, body mass index; CCVD, cardiovascular and cerebrovascular diseases; CKD, chronic kidney disease; COPD, chronic obstructive pulmonary disease; CRP, C‐reactive protein; G−, Gram‐negative; G+, Gram‐positive; IL‐6, interleukin 6; IQR, interquartile range; Scr, serum creatinine; SD, standard deviation; SOFA, Sequential Organ Failure Assessment; TNF‐α, tumor necrosis factor alpha; WBC, white blood cell.
FIGURE 1lnc‐SNHG16 in sepsis patients and HCs. Comparison of lnc‐SNHG16 between patients and HCs (A); capability of lnc‐SNHG16 in discriminating patients from HCs (B). Abbreviations: AUC, area under curve; CI, confidence interval; HC, health controls; lnc‐SNHG16, long noncoding RNA small nucleolar RNA host gene 16
FIGURE 2Capability of lnc‐SNHG16 in predicting ARDS occurrence in sepsis patients. Occurrence rate of ARDS (A); mortality rate in patients with or without ARDS (B); comparison of lnc‐SNHG16 between patients with ARDS and those without ARDS (C); the ability of lnc‐SNHG16 in discriminating patients with ARDS from those without ARDS (D). Abbreviations: ARDS, acute respiratory distress syndrome; CI, confidence interval; lnc‐SNHG16, long noncoding RNA small nucleolar RNA host gene 16
Factors related to the risk of ARDS occurrence by logistic regression model analysis
| Items |
| OR | 95%CI | |
|---|---|---|---|---|
| Lower | Upper | |||
| Univariate logistic regression | ||||
| Higher lnc‐SNHG16 |
| 0.053 | 0.011 | 0.248 |
| Higher age |
| 1.077 | 1.010 | 1.149 |
| Gender (Male vs. Female) | 0.986 | 1.007 | 0.494 | 2.053 |
| Higher BMI | 0.144 | 1.082 | 0.973 | 1.203 |
| Smoke (Yes vs. No) |
| 2.285 | 1.110 | 4.704 |
| Drink (Yes vs. No) | 0.776 | 1.109 | 0.543 | 2.268 |
| History of hypertension (Yes vs. No) | 0.584 | 1.220 | 0.600 | 2.482 |
| History of hyperlipidemia (Yes vs. No) | 0.132 | 1.980 | 0.814 | 4.820 |
| History of diabetes (Yes vs. No) | 0.186 | 1.926 | 0.729 | 5.088 |
| History of CKD (Yes vs. No) | 0.361 | 1.731 | 0.534 | 5.609 |
| History of CCVD (Yes vs. No) | 0.596 | 1.257 | 0.540 | 2.923 |
| History of asthma (Yes vs. No) | 0.177 | 2.350 | 0.679 | 8.136 |
| History of COPD (Yes vs. No) |
| 4.580 | 1.619 | 12.955 |
| Primary infection site | ||||
| Abdominal infection | Ref. | |||
| Respiratory infection |
| 3.692 | 1.544 | 8.827 |
| Skin and soft tissue infection | 0.755 | 0.821 | 0.236 | 2.849 |
| Other infections | 0.776 | 0.862 | 0.309 | 2.403 |
| Primary organism | ||||
| G− bacteria (Yes vs. No) | 0.441 | 1.316 | 0.654 | 2.646 |
| G+ bacteria (Yes vs. No) | 0.358 | 0.675 | 0.292 | 1.561 |
| Fungus (Yes vs. No) | 0.925 | 1.060 | 0.314 | 3.573 |
| Others (Yes vs. No) | 0.303 | 1.607 | 0.652 | 3.964 |
| Total culture negative (Yes vs. No) | 0.670 | 0.806 | 0.299 | 2.173 |
| Higher APACHE II score |
| 1.070 | 1.011 | 1.132 |
| Higher SOFA score |
| 1.300 | 1.087 | 1.554 |
| Higher Scr | 0.295 | 1.122 | 0.905 | 1.390 |
| Higher Albumin | 0.305 | 0.982 | 0.948 | 1.017 |
| Higher WBC | 0.304 | 1.016 | 0.986 | 1.047 |
| Higher CRP |
| 1.012 | 1.004 | 1.019 |
| Higher TNF‐α | 0.163 | 1.002 | 0.999 | 1.006 |
| Higher IL‐6 | 0.104 | 1.009 | 0.998 | 1.020 |
| Multivariate logistic regression (Step forward method) | ||||
| Higher lnc‐SNHG16 |
| 0.061 | 0.011 | 0.331 |
| Higher age |
| 1.089 | 1.012 | 1.172 |
| Primary infection site | ||||
| Abdominal infection | Ref. | |||
| Respiratory infection |
| 3.850 | 1.439 | 10.298 |
| Skin and soft tissue infection | 0.576 | 1.497 | 0.364 | 6.149 |
| Other infections | 0.677 | 0.789 | 0.258 | 2.410 |
| Higher CRP |
| 1.009 | 1.000 | 1.017 |
Abbreviations: APACHE II, Acute Physiology and Chronic Health Evaluation II; ARDS, acute respiratory distress syndrome; BMI, body mass index; CCVD, cardiovascular and cerebrovascular diseases; CI, confidence interval; CKD, chronic kidney disease; COPD, chronic obstructive pulmonary disease; CRP, C‐reactive protein; G−, Gram‐negative; G+, Gram‐positive; IL‐6, interleukin 6; lnc‐SNHG16, long noncoding RNA small nucleolar RNA host gene 16; OR, odds ratio; Scr, serum creatinine; SOFA, Sequential Organ Failure Assessment; TNF‐α, tumor necrosis factor alpha; WBC, white blood cell.
p values in bold indicates it has statistical significant.
Correlation of lnc‐SNHG16 expression with medical history and disease features in sepsis patients
| Items | lnc‐SNHG16, median (IQR) | Statistic ( |
|
|---|---|---|---|
| History of hypertension | |||
| No | 0.380 (0.281–0.760) | −0.656 | 0.512 |
| Yes | 0.473 (0.271–0.826) | ||
| History of hyperlipidemia | |||
| No | 0.415 (0.282–0.762) | −0.153 | 0.879 |
| Yes | 0.457 (0.224–0.810) | ||
| History of diabetes | |||
| No | 0.468 (0.286–0.805) | −2.500 |
|
| Yes | 0.321 (0.187–0.422) | ||
| History of CKD | |||
| No | 0.424 (0.282–0.752) | −0.181 | 0.856 |
| Yes | 0.385 (0.175–0.961) | ||
| History of CCVD | |||
| No | 0.450 (0.283–0.760) | −0.424 | 0.671 |
| Yes | 0.372 (0.216–0.866) | ||
| History of asthma | |||
| No | 0.437 (0.281–0.763) | −0.486 | 0.627 |
| Yes | 0.348 (0.172–0.910) | ||
| History of COPD | |||
| No | 0.442 (0.286–0.770) | −2.021 |
|
| Yes | 0.302 (0.132–0.694) | ||
| Primary infection site | |||
| Abdominal infection | 0.457 (0.236–0.820) | 5.021 | 0.170 |
| Respiratory infection | 0.371 (0.282–0.645) | ||
| Skin and soft tissue infection | 0.649 (0.324–0.929) | ||
| Other infections | 0.398 (0.285–0.643) | ||
| Primary organism | |||
| G− bacteria | 0.421 (0.268–0.705) | 8.727 | 0.068 |
| G+ bacteria | 0.656 (0.325–0.913) | ||
| Fungus | 0.359 (0.227–0.452) | ||
| Others | 0.324 (0.217–0.697) | ||
| Total culture negative | 0.353 (0.280–0.692) | ||
Abbreviations: CCVD, cardiovascular and cerebrovascular diseases; CKD, chronic kidney disease; COPD, chronic obstructive pulmonary disease; G−, Gram‐negative; G+, Gram‐positive; IQR, interquartile range; lnc‐SNHG16, long noncoding RNA small nucleolar RNA host gene 16.
p values in bold indicates it has statistical significant.
FIGURE 3Association of lnc‐SNHG16 with APACHE II and SOFA scores and their abilities to predict mortality in sepsis patients. Correlation of lnc‐SNHG16 with APACHE II (A) and SOFA (B) scores; comparison of lnc‐SNHG16 (C), APACHE II (D) and SOFA (E) scores between 28‐day survivors and 28‐day deaths; the ability of lnc‐SNHG16 (F), APACHE II and SOFA (G) scores in predicting mortality risk in patients. Abbreviations: APACHE II, Acute Physiology and Chronic Health Evaluation II; AUC, area under curve; CI, confidence interval; Lnc‐SNHG16, long noncoding RNA small nucleolar RNA host gene 16; SOFA, Sequential Organ Failure Assessment
Factors related to 28‐day mortality by logistic regression model analysis
| Items |
| OR | 95%CI | |
|---|---|---|---|---|
| Lower | Upper | |||
| Univariate logistic regression | ||||
| Higher lnc‐SNHG16 |
| 0.081 | 0.016 | 0.401 |
| Higher age | 0.398 | 1.029 | 0.963 | 1.100 |
| Gender (Male vs. Female) | 0.340 | 0.691 | 0.324 | 1.475 |
| Higher BMI | 0.053 | 1.121 | 0.998 | 1.259 |
| Smoke (Yes vs. No) | 0.635 | 0.820 | 0.360 | 1.866 |
| Drink (Yes vs. No) | 0.665 | 1.185 | 0.550 | 2.556 |
| History of hypertension (Yes vs. No) | 0.730 | 1.145 | 0.531 | 2.467 |
| History of diabetes (Yes vs. No) |
| 4.600 | 1.731 | 12.225 |
| History of CKD (Yes vs. No) | 0.141 | 2.437 | 0.744 | 7.990 |
| History of CCVD (Yes vs. No) | 0.156 | 1.873 | 0.788 | 4.452 |
| History of asthma (Yes vs. No) | 0.655 | 1.371 | 0.344 | 5.468 |
| History of COPD (Yes vs. No) | 0.164 | 2.144 | 0.732 | 6.283 |
| Primary infection site | ||||
| Abdominal infection | Ref. | |||
| Respiratory infection |
| 3.975 | 1.490 | 10.602 |
| Skin and soft tissue infection | 0.564 | 1.472 | 0.396 | 5.478 |
| Other infections | 0.274 | 1.828 | 0.621 | 5.379 |
| Primary organism | ||||
| G− bacteria (Yes vs. No) | 0.114 | 0.541 | 0.252 | 1.160 |
| G+ bacteria (Yes vs. No) | 0.391 | 0.669 | 0.267 | 1.674 |
| Fungus (Yes vs. No) | 0.198 | 2.148 | 0.670 | 6.884 |
| Others (Yes vs. No) | 0.068 | 2.358 | 0.938 | 5.929 |
| Total culture negative (Yes vs. No) | 0.187 | 1.882 | 0.735 | 4.820 |
| Higher APACHE II score |
| 1.249 | 1.150 | 1.357 |
| Higher SOFA score |
| 1.863 | 1.468 | 2.364 |
| Higher Scr |
| 1.293 | 1.036 | 1.614 |
| Higher Albumin | 0.946 | 0.999 | 0.963 | 1.036 |
| Higher WBC | 0.341 | 1.016 | 0.984 | 1.048 |
| Higher CRP |
| 1.014 | 1.006 | 1.023 |
| Higher TNF‐α |
| 1.008 | 1.004 | 1.012 |
| Higher IL‐6 |
| 1.011 | 1.000 | 1.023 |
| Multivariate logistic regression (Step forward method) | ||||
| Fungus (Yes vs. No) |
| 13.479 | 2.206 | 82.346 |
| Higher APACHE II score |
| 1.216 | 1.096 | 1.349 |
| Higher SOFA score |
| 1.632 | 1.216 | 2.191 |
| Higher TNF‐α |
| 1.011 | 1.005 | 1.017 |
Abbreviations: APACHE II, Acute Physiology and Chronic Health Evaluation II; BMI, body mass index; CCVD, cardiovascular and cerebrovascular diseases; CI, confidence interval; CKD, chronic kidney disease; COPD, chronic obstructive pulmonary disease; CRP, C‐reactive protein; G−, Gram‐negative; G+, Gram‐positive; IL‐6, interleukin 6; lnc‐SNHG16, long noncoding RNA small nucleolar RNA host gene 16; OR, odds ratio; Scr, serum creatinine; SOFA, Sequential Organ Failure Assessment; TNF‐α, tumor necrosis factor alpha; WBC, white blood cell.
p values in bold indicates it has statistical significant.