Literature DB >> 35618849

Maximum Entropy Technique and Regularization Functional for Determining the Pharmacokinetic Parameters in DCE-MRI.

Zahra Amini Farsani1,2, Volker J Schmid3.   

Abstract

This paper aims to solve the arterial input function (AIF) determination in dynamic contrast-enhanced MRI (DCE-MRI), an important linear ill-posed inverse problem, using the maximum entropy technique (MET) and regularization functionals. In addition, estimating the pharmacokinetic parameters from a DCE-MR image investigations is an urgent need to obtain the precise information about the AIF-the concentration of the contrast agent on the left ventricular blood pool measured over time. For this reason, the main idea is to show how to find a unique solution of linear system of equations generally in the form of [Formula: see text] named an ill-conditioned linear system of equations after discretization of the integral equations, which appear in different tomographic image restoration and reconstruction issues. Here, a new algorithm is described to estimate an appropriate probability distribution function for AIF according to the MET and regularization functionals for the contrast agent concentration when applying Bayesian estimation approach to estimate two different pharmacokinetic parameters. Moreover, by using the proposed approach when analyzing simulated and real datasets of the breast tumors according to pharmacokinetic factors, it indicates that using Bayesian inference-that infer the uncertainties of the computed solutions, and specific knowledge of the noise and errors-combined with the regularization functional of the maximum entropy problem, improved the convergence behavior and led to more consistent morphological and functional statistics and results. Finally, in comparison to the proposed exponential distribution based on MET and Newton's method, or Weibull distribution via the MET and teaching-learning-based optimization (MET/TLBO) in the previous studies, the family of Gamma and Erlang distributions estimated by the new algorithm are more appropriate and robust AIFs.
© 2022. The Author(s).

Entities:  

Keywords:  Arterial input function; Dynamic contrast-enhanced MRI; Gamma distribution; Maximum entropy technique; Pharmacokinetic parameters; Regularization Functional

Mesh:

Substances:

Year:  2022        PMID: 35618849      PMCID: PMC9582183          DOI: 10.1007/s10278-022-00646-3

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.903


  66 in total

1.  Bayesian estimation of pharmacokinetic parameters for DCE-MRI with a robust treatment of enhancement onset time.

Authors:  Matthew R Orton; David J Collins; Simon Walker-Samuel; James A d'Arcy; David J Hawkes; David Atkinson; Martin O Leach
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2.  Informatics in Radiology (infoRAD): Magnetic Resonance Imaging Workbench: analysis and visualization of dynamic contrast-enhanced MR imaging data.

Authors:  James A d'Arcy; David J Collins; Anwar R Padhani; Simon Walker-Samuel; John Suckling; Martin O Leach
Journal:  Radiographics       Date:  2006 Mar-Apr       Impact factor: 5.333

3.  Dynamic contrast-enhanced magnetic resonance imaging in prostate cancer clinical trials: potential roles and possible pitfalls.

Authors:  Fiona M Fennessy; Rana R McKay; Clair J Beard; Mary-Ellen Taplin; Clare M Tempany
Journal:  Transl Oncol       Date:  2014-02-01       Impact factor: 4.243

4.  Reconstructing Boolean models of signaling.

Authors:  Roded Sharan; Richard M Karp
Journal:  J Comput Biol       Date:  2013-01-03       Impact factor: 1.479

5.  DNA sequence symmetries from randomness: the origin of the Chargaff's second parity rule.

Authors:  Piero Fariselli; Cristian Taccioli; Luca Pagani; Amos Maritan
Journal:  Brief Bioinform       Date:  2021-03-22       Impact factor: 11.622

6.  Scan-rescan variability in perfusion assessment of tumors in MRI using both model and data-derived arterial input functions.

Authors:  Edward Ashton; David Raunig; Chaan Ng; Fredrick Kelcz; Teresa McShane; Jeffrey Evelhoch
Journal:  J Magn Reson Imaging       Date:  2008-09       Impact factor: 4.813

7.  Estimation of pharmacokinetic parameters from DCE-MRI by extracting long and short time-dependent features using an LSTM network.

Authors:  Jiaren Zou; James M Balter; Yue Cao
Journal:  Med Phys       Date:  2020-06-03       Impact factor: 4.071

8.  The Impact of Arterial Input Function Determination Variations on Prostate Dynamic Contrast-Enhanced Magnetic Resonance Imaging Pharmacokinetic Modeling: A Multicenter Data Analysis Challenge, Part II.

Authors:  Wei Huang; Yiyi Chen; Andriy Fedorov; Xia Li; Guido H Jajamovich; Dariya I Malyarenko; Madhava P Aryal; Peter S LaViolette; Matthew J Oborski; Finbarr O'Sullivan; Richard G Abramson; Kourosh Jafari-Khouzani; Aneela Afzal; Alina Tudorica; Brendan Moloney; Sandeep N Gupta; Cecilia Besa; Jayashree Kalpathy-Cramer; James M Mountz; Charles M Laymon; Mark Muzi; Paul E Kinahan; Kathleen Schmainda; Yue Cao; Thomas L Chenevert; Bachir Taouli; Thomas E Yankeelov; Fiona Fennessy; Xin Li
Journal:  Tomography       Date:  2019-03

9.  Maximum entropy and population heterogeneity in continuous cell cultures.

Authors:  Jorge Fernandez-de-Cossio-Diaz; Roberto Mulet
Journal:  PLoS Comput Biol       Date:  2019-02-27       Impact factor: 4.475

10.  Modified Maximum Entropy Method and Estimating the AIF via DCE-MRI Data Analysis.

Authors:  Zahra Amini Farsani; Volker J Schmid
Journal:  Entropy (Basel)       Date:  2022-01-20       Impact factor: 2.524

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