| Literature DB >> 35601498 |
Hanxiao Chen1,2,3, Ze Du4, Yaoyao Zhang2,3, Mengling Li2,3, Rui Gao2,3, Lang Qin2,3, Hongjing Wang1,2.
Abstract
In recent years, many studies have indicated that vitamin C might be negatively associated with the risk of cancer, but the actual relationship between vitamin C and cancer remains ambivalent. Therefore, we utilized a two-sample Mendelian randomization (MR) study to explore the causal associations of genetically predicted vitamin C with the risk of a variety of cancers. Single-nucleotide polymorphisms (SNPs) associated with vitamin C at a significance level of p < 5 × 10-8 and with a low level of linkage disequilibrium (LD) (r2 < 0.01) were selected from a genome-wide association study (GWAS) meta-analysis of plasmid concentration of vitamin C consisting of 52,018 individuals. The data of the GWAS outcomes were obtained from United Kingdom Biobank, FinnGen Biobank and the datasets of corresponding consortia. In the inverse-variance weight (IVW) method, our results did not support the causal association of genetically predicted vitamin C with the risk of overall cancer and 14 specific types of cancer. Similar results were observed in sensitivity analyses where the weighted median and MR-Egger methods were adopted, and heterogeneity and pleiotropy were not observed in statistical models. Therefore, our study suggested that vitamin C was not causally associated with the risk of cancer. Further studies are warranted to discover the potential protective and therapeutic effects of vitamin C on cancer, and its underlying mechanisms.Entities:
Keywords: GWAS; Mendelian randomization; SNP; cancer; vitamin c
Year: 2022 PMID: 35601498 PMCID: PMC9117647 DOI: 10.3389/fgene.2022.868408
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.772
FIGURE 1Overview of the design and three key assumptions of the Mendelian randomization study. IVs, instrument variables; SNPs, single-nucleotide polymorphisms.
Vitamin C SNPs used to construct the instrument variable.
| Chr | Position | SNP | Effect allele | Other allele | EAF | Beta | SE | Gene |
| F Statistics |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2330190 | rs6693447 | T | G | 0.551 | 0.039 | 0.006 | RER1 | 6.25E-10 | 42.25 |
| 2 | 220031255 | rs13028225 | T | C | 0.857 | 0.102 | 0.009 | SLC23A3 | 2.38E-30 | 128.4444 |
| 5 | 138715502 | rs33972313 | C | T | 0.968 | 0.36 | 0.018 | SLC23A1 | 4.61E-90 | 400 |
| 5 | 176799992 | rs10051765 | C | T | 0.342 | 0.039 | 0.007 | RGS14 | 3.64E-09 | 31.04082 |
| 11 | 61570783 | rs174547 | C | T | 0.328 | 0.036 | 0.007 | FADS1 | 3.84E-08 | 26.44898 |
| 12 | 96249111 | rs117885456 | A | G | 0.087 | 0.078 | 0.012 | SNRPF | 1.70E-11 | 42.25 |
| 12 | 102093459 | rs2559850 | A | G | 0.598 | 0.058 | 0.006 | CHPT1 | 6.30E-20 | 93.44444 |
| 14 | 105253581 | rs10136000 | A | G | 0.283 | 0.04 | 0.007 | AKT1 | 1.33E-08 | 32.65306 |
| 16 | 79740541 | rs56738967 | C | G | 0.321 | 0.041 | 0.007 | MAF | 7.62E-10 | 34.30612 |
| 17 | 59456589 | rs9895661 | T | C | 0.817 | 0.063 | 0.008 | BCAS3 | 1.05E-14 | 62.01563 |
Abbreviations: Chr, chromosome; SNP, single-nucleotide polymorphism; EAF, effect allele frequency; SE, standard error.
Characteristics of included studies or consortia of cancer.
| Type of Cancer | Source | Year | Sample size | Population |
|---|---|---|---|---|
| Overall cancer | UKBB | 2018 | 461311 | European |
| FinnGen Biobank | 2020 | 96499 | European | |
| Bronchus and lung | UKBB | 2018 | 361194 | European |
| FinnGen Biobank | 2020 | 96499 | European | |
| ILCCO | 2014 | 27209 | European | |
| Breast | UKBB | 2018 | 462933 | European |
| FinnGen Biobank | 2020 | 96499 | European | |
| BCAC | 2017 | 228951 | European | |
| Pancreas | PanScan1 | 2009 | 3,835 | European |
| FinnGen Biobank | 2020 | 96499 | European | |
| Colon | UKBB | 2018 | 462933 | European |
| FinnGen Biobank | 2020 | 96499 | European | |
| Rectum | UKBB | 2018 | 463010 | European |
| FinnGen Biobank | 2020 | 96499 | European | |
| Kidney | UKBB | 2018 | 463010 | European |
| FinnGen Biobank | 2020 | 96499 | European | |
| Bladder | UKBB | 2018 | 462933 | European |
| FinnGen Biobank | 2020 | 96499 | European | |
| Prostate | UKBB | 2018 | 463010 | European |
| FinnGen Biobank | 2020 | 96499 | European | |
| PRACTICAL | 2018 | 140254 | European | |
| Ovary | UKBB | 2018 | 463010 | European |
| FinnGen Biobank | 2020 | 96499 | European | |
| OCAC | 2017 | 66450 | European | |
| Uterus/endometrium | UKBB | 2018 | 462933 | European |
| FinnGen Biobank | 2020 | 96499 | European |
Abbreviations: UKBB, United Kingdom, biobank; ILCCO, international lung cancer consortium; BCAC, breast cancer association consortium; PanScan1, Pancreatic Cancer Cohort Consortium GWAS; PRACTICAL, prostate cancer association group to investigate cancer-associated alterations in the genome; OCAC, ovarian cancer association consortium.
Associations between genetically predicted vitamin C and risk of cancer.
| Type of cancer | Data source | Number of SNPs | Inverse variance weighted | MR-Egger | Simple mode | Weighted median | Weighted mode | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Or (95%CI) | P | Or (95%CI) | P | Or (95%CI) | P | Or (95%CI) | P | Or (95%CI) | P | |||
| Overall cancer | UKBB | 10 | 0.998 (0.992–1.004) | 0.452 | 1.003 (0.994–1.012) | 0.562 | 0.991 (0.977–1.006) | 0.28 | 1.002 (0.994–1.009) | 0.663 | 1.003 (0.995–1.011) | 0.492 |
| FinnGen Biobank | 7 | 1.046 (0.839–1.304) | 0.692 | 1.107 (0.779–1.573) | 0.596 | 1.073 (0.731–1.574) | 0.732 | 1.076 (0.848–1.367) | 0.546 | 1.077 (0.834–1.392) | 0.59 | |
| Bronchus and lung | UKBB | 10 | 0.999 (0.998–1.001) | 0.323 | 1.000 (0.997–1.003) | 0.982 | 0.996 (0.993–1.000) | 0.058 | 1.000 (0.998–1.002) | 0.795 | 1.000 (0.998–1.002) | 0.889 |
| FinnGen Biobank | 7 | 1.035 (0.355–3.017) | 0.95 | 2.274 (0.522–9.903) | 0.323 | 1.414 (0.388–5.156) | 0.618 | 1.517 (0.582–3.957) | 0.394 | 1.590 (0.561–4.505) | 0.416 | |
| ILCCO | 9 | 1.014 (0.690–1.491) | 0.943 | 1.259 (0.678–2.340) | 0.49 | 1.174 (0.757–1.820) | 0.494 | 1.075 (0.830–1.391) | 0.586 | 1.078 (0.829–1.402) | 0.592 | |
| Breast | UKBB | 10 | 1.002 (0.999–1.005) | 0.15 | 1.002 (0.998–1.007) | 0.362 | 0.999 (0.993–1.006) | 0.826 | 1.002 (0.998–1.006) | 0.292 | 1.002 (0.998–1.007) | 0.301 |
| FinnGen Biobank | 7 | 0.842 (0.470–1.507) | 0.562 | 0.516 (0.246–1.079) | 0.139 | 0.780 (0.381–1.598) | 0.523 | 0.669 (0.430–1.041) | 0.075 | 0.652 (0.420–1.012) | 0.105 | |
| BCAC | 8 | 1.046 (0.931–1.176) | 0.447 | 1.039 (0.862–1.252) | 0.704 | 1.002 (0.826–1.215) | 0.985 | 1.042 (0.948–1.146) | 0.389 | 1.053 (0.951–1.166) | 0.355 | |
| Pancreas | PanScan1 | 4 | 1.440 (0.556–3.731) | 0.452 | 0.612 (0.058–6.485) | 0.723 | 1.253 (0.289–5.439) | 0.783 | 1.249 (0.417–3.746) | 0.691 | 1.173 (0.339–4.060) | 0.818 |
| FinnGen Biobank | 7 | 0.783 (0.230–2.672) | 0.697 | 0.873 (0.120–6.358) | 0.898 | 1.043 (0.130–8.376) | 0.969 | 0.721 (0.177–2.925) | 0.647 | 0.897 (0.210–3.830) | 0.888 | |
| Colon | UKBB | 6 | 0.997 (0.994–0.999) | 0.003 | 1.000 (0.987–1.013) | 0.986 | 0.997 (0.993–1.001) | 0.167 | 0.997 (0.994–1.000) | 0.048 | 0.997 (0.993–1.001) | 0.164 |
| FinnGen Biobank | 7 | 0.624 (0.269–1.445) | 0.271 | 0.590 (0.151–2.297) | 0.481 | 0.633 (0.138–2.889) | 0.576 | 0.616 (0.252–1.503) | 0.287 | 0.619 (0.256–1.497) | 0.328 | |
| Rectum | UKBB | 6 | 0.998 (0.996–1.001) | 0.164 | 0.993 (0.980–1.006) | 0.342 | 0.998 (0.993–1.002) | 0.39 | 0.998 (0.995–1.001) | 0.157 | 0.997 (0.993–1.001) | 0.227 |
| FinnGen Biobank | 7 | 0.831 (0.278–2.490) | 0.741 | 1.287 (0.252–6.556) | 0.774 | 0.361 (0.064–2.027) | 0.291 | 0.971 (0.273–3.457) | 0.964 | 1.055 (0.252–4.418) | 0.944 | |
| Kidney | UKBB | 5 | 1.001 (0.999–1.003) | 0.348 | 1.008 (0.996–1.019) | 0.296 | 1.002 (0.998–1.005) | 0.405 | 1.002 (0.999–1.004) | 0.168 | 1.002 (0.999–1.006) | 0.319 |
| FinnGen Biobank | 7 | 1.019 (0.258–4.032) | 0.979 | 3.268 (0.566–18.852) | 0.243 | 1.411 (0.226–8.812) | 0.725 | 1.875 (0.555–6.342) | 0.312 | 1.936 (0.606–6.192) | 0.308 | |
| Bladder | UKBB | 5 | 0.999 (0.997–1.002) | 0.568 | 1.005 (0.993–1.017) | 0.475 | 1.000 (0.996–1.004) | 0.921 | 1.000 (0.998–1.003) | 0.869 | 1.001 (0.997–1.004) | 0.759 |
| FinnGen Biobank | 7 | 1.177 (0.316–4.384) | 0.808 | 3.023 (0.489–18.67) | 0.287 | 1.916 (0.276–13.28) | 0.535 | 1.694 (0.527–5.442) | 0.376 | 2.039 (0.638–6.515) | 0.275 | |
| Prostate | UKBB | 9 | 1.000 (0.996–1.004) | 0.966 | 1.000 (0.989–1.011) | 0.995 | 1.002 (0.995–1.009) | 0.59 | 1.000 (0.995–1.005) | 0.937 | 1.001 (0.996–1.007) | 0.661 |
| FinnGen Biobank | 7 | 1.393 (0.899–2.156) | 0.138 | 1.491 (0.779–2.854) | 0.282 | 1.389 (0.612–3.150) | 0.462 | 1.396 (0.826–2.362) | 0.213 | 1.428 (0.831–2.455) | 0.245 | |
| PRACTICAL | 10 | 0.966 (0.886–1.054) | 0.438 | 0.974 (0.850–1.116) | 0.715 | 0.984 (0.823–1.177) | 0.863 | 0.980 (0.880–1.091) | 0.709 | 0.986 (0.876–1.108) | 0.814 | |
| Ovary | UKBB | 5 | 0.998 (0.996–1.000) | 0.04 | 0.996 (0.984–1.007) | 0.526 | 0.997 (0.994–1.001) | 0.192 | 0.998 (0.995–1.000) | 0.052 | 0.997 (0.994–1.000) | 0.17 |
| FinnGen Biobank | 7 | 0.957 (0.260–3.519) | 0.947 | 0.470 (0.068–3.254) | 0.479 | 1.247 (0.124–12.539) | 0.857 | 0.685 (0.148–3.172) | 0.628 | 0.655 (0.117–3.652) | 0.646 | |
| OCAC | 8 | 0.928 (0.792–1.088) | 0.358 | 0.801 (0.638–1.006) | 0.105 | 1.093 (0.797–1.498) | 0.599 | 0.891 (0.739–1.074) | 0.227 | 0.857 (0.712–1.033) | 0.149 | |
| Uterus/endometrium | UKBB | 5 | 1.000 (0.998–1.002) | 0.809 | 1.004 (0.992–1.016) | 0.527 | 1.000 (0.996–1.003) | 0.973 | 1.000 (0.997–1.003) | 0.948 | 1.000 (0.997–1.003) | 0.889 |
| FinnGen Biobank | 7 | 1.230 (0.488–3.101) | 0.661 | 2.922 (0.743–11.488) | 0.185 | 0.862 (0.134–5.553) | 0.881 | 1.864 (0.607–5.723) | 0.276 | 1.940 (0.661–5.696) | 0.273 | |
Abbreviations: SNP, single-nucleotide polymorphism; OR, odds ratio; CI, confidence interval; UKBB, UK biobank; ILCCO, international lung cancer consortium; BCAC, breast cancer association consortium; PanScan1, Pancreatic Cancer Cohort Consortium GWAS; PRACTICAL, prostate cancer association group to investigate cancer-associated alterations in the genome; OCAC, ovarian cancer association consortium.
FIGURE 2Causal effect estimates of vitamin C on cancer outcomes. SNP, single-nucleotide polymorphism; OR, odds ratio; CI, confidence interval; UKBB, UKn Biobank; ILCCO, International Lung Cancer Consortium; BCAC, Breast Cancer Association Consortium; PanScan1, Pancreatic Cancer Cohort Consortium GWAS; PRACTICAL, Prostate Cancer Association group To Investigate Cancer-Associated Alterations in the Genome; OCAC, Ovarian Cancer Association Consortium.