Literature DB >> 35585928

Two new Clitocella species from North China revealed by phylogenetic analyses and morphological characters.

Ning Mao1, Jing-Chong Lv1, Yu-Yan Xu1, Tao-Yu Zhao1, Li Fan1.   

Abstract

Two new species of Clitocella are proposed based on morphological and phylogenetic investigations. Clitocellaborealichinensis sp. nov. is closely related to C.orientalis but distinguished from the latter by its slightly smaller basidiospores and hyphae of pileipellis with pale brown to brown intracellular or parietal pigment. Clitocellacolorata sp. nov. is closely related to C.popinalis and C.mundula in macromorphology but is differentiated from C.popinalis by its slightly smaller basidiospores and the difference in genetic profile, and from C.mundula by its relatively colorful pileus (white to yellowish white, grayish white to grayish brown, pink white). Phylogenetic analyses based on sequence data from five different loci (ITS, nrLSU, tef1, rpb2 and atp6) support the taxonomic position of the two new species in the genus Clitocella. The illustrations and descriptions for the new taxa are provided. Ning Mao, Jing-Chong Lv, Yu-Yan Xu, Tao-Yu Zhao, Li Fan.

Entities:  

Keywords:  Entolomataceae; multigene; phylogeny; taxonomy

Year:  2022        PMID: 35585928      PMCID: PMC9021152          DOI: 10.3897/mycokeys.88.80068

Source DB:  PubMed          Journal:  MycoKeys        ISSN: 1314-4049            Impact factor:   3.111


Introduction

The genus Kluting, T.J. Baroni & Bergemann (, ), with (Fr.) Kluting, T.J. Baroni & Bergemann as the type species, was established in 2014 (Kluting et al. 2014). The main characteristics of are clitocyboid basidiomata, narrow and crowded, long-decurrent lamellae, central to eccentric stipe, thin-walled (<0.5 μm) basidiospores with undulate pustules or minute bumps, clamp connections absent. (Baroni 1981; Kluting et al. 2014; Jian et al. 2020). Previous studies show that is phylogenetically closely related to the genera (Fr. ex Rabenh.) P. Kumm. and Maire. differs from in its longitudinally ridged basidiospore ornamentation, and in its basidiospores with thickened walls (0.5–0.9 μm) and obscure irregular rounded angles of the basidiospores in polar view (Kluting et al. 2014; Baroni et al. 2020; Jian et al. 2020). There are 10 accepted species in (Index Fungorum, http://www.Indexfungorum.org/; accessed date: 19 November 2021). In China, the species diversity of is scarce and only two species are described (Jian et al. 2020). Recently, several specimens of were collected when we investigated the macrofungi in Shanxi province, North China. The morphological examination and phylogenetic analysis for these collections revealed that they represented three taxa of , including two new species. The aim of this paper is to describe the new species and provide the DNA data to confirm the presence in China of a previously described species.

Materials and methods

Morphological studies

Collections were obtained and photographed in the field from Shanxi regions in China, and then dried in a fruit drier at 40–50 °C and deposited in BJTC herbarium (Capital Normal University, Beijing, China). The sizes of basidiomata (pileal width) used in this study are as follows: small: <30 mm; medium-sized: 30–50 mm; large: >50 mm. Standardised color values were obtained from ColorHexa (http://www.colorhexa.com/). Microscopic characters were observed in sections obtained from dry specimens mounted in 3% KOH, Congo Red, or Melzer’s reagent (Dring 1971). For scanning electron microscopy (SEM), basidiospores were scraped from the dried gleba, placed onto double-sided tape that was mounted directly on the SEM stub, coated with platinum-palladium film of 8 nm thick using an ion-sputter coater (HITACHI E-1010), and examined with a HITACHI S-4800 SEM. The term “[n/m/p]” means n basidiospores from m basidiomata of p collections. Dimensions of basidiospores are given using the following format ‘(a–)b–c(–d)’, where the range ‘b–c’ represents at least 90% of the measured values, and ‘a’ and ‘d’ are the most extreme values. Lm and Wm indicate the average basidiospore length and width (± standard deviation) for the measured basidiospore, respectively. ‘Q’ refers to the length/width ratio of basidiospores in side-view; ‘Qav’ refers to the average Q of all basidiospores ±standard deviation.

DNA extraction, PCR amplification and DNA sequencing

Dried basidiomata were crushed by shaking for 45 s at 30 Hz 2–4 times (Mixer Mill MM301, Retsch, Haan, Germany) in a 1.5 mL tube together with a 3 mm diam tungsten carbide ball. Total genomic DNA was extracted from the powdered basidiomata using NuClean Plant Genomic DNA Kit (CWBIO, China), following the manufacturer’s instructions. Primers ITS1F and ITS4 were employed for the ITS (White et al. 1990; Gardes and Bruns 1993), while LR0R and LR5 for nrLSU (Vilgalys and Hester 1990), EF1-983F and EF1-1953R for the tef1 (Rehner 2001), bRPB2-6F and bRPB2-7R2 for the rpb2 (Liu et al. 1999; Matheny 2005; Matheny et al. 2007), and ATP6-3 and ATP6-6r for the atp6 (Kretzer and Bruns 1999; Binder and Hibbett 2003). Polymerase chain reactions (PCR) for ITS region, nrLSU region, tef1 gene, rpb2 gene and atp6 gene were performed in 25 µL reaction containing 2 µL DNA template, 1 µL primer (10 µM) each, 12.5 µL of 2× Master Mix [Tiangen Biotech (Beijing) Co.], 8.5 µL ddH2O. PCR reactions were implemented as follows: an initial denaturation at 94 °C for 5 min, then to 35 cycles of the following denaturation at 94 °C for 30 s, annealing at 52 °C for 45 s (ITS), 60 s (nrLSU), 72 °C for 1 min; and a final extension at 72 °C for 10 min. Amplification of rpb2 and tef1 sequences followed Kluting et al. (2014), which entailed a touchdown protocol: an initial incubation of 94 °C for 5 min; 12 cycles of 94 °C for 1 min, 67 °C for 1 min, decreasing 1 °C each cycle, and 72 °C for 1.5 min; 36 cycles of 94 °C for 45 s, 55 °C for 1 min, and 72 °C for 1.5 min; and a final extension period at 72 °C for 7 min. Sequences of the atp6 were amplified with a cycling protocol of 95 °C for 5 min, followed by 40 cycles at 95 °C for 30 s, 42 °C for 2 min, and 72 °C for 1 min, and a final extension at 72 °C for 10 min. The PCR products were sent to Beijing Zhongkexilin Biotechnology Co. Ltd. for purification, sequencing, and editing. Validated sequences were deposited in the NCBI database (http://www.ncbi.nlm.nih.gov/). Other sequences of and related species were mainly selected from those used by previous studies (Kluting et al. 2014; Vizzini et al. 2016; Baroni et al. 2020; Jian et al. 2020). The accession numbers of all sequences employed are provided in Table 1.
Table 1.

Specimens used in molecular phylogenetic studies and their GenBank accession numbers. Newly generated sequences are in bold.

SpeciesVoucherLocalityGenBank accession No.
ITSnrLSU rpb2 tef1 atp6
Catathelasmaventricosum DAOM221514USA KP255469
Clitocellacolorata BJTC FM1593 China OL966940
Clitocellacolorata BJTC FM1594 China OL966941
Clitocellacolorata BJTC FM1891 China OL966944 OL966955 OL989914 OL989918 OL989924
Clitocellacolorata BJTC FM1892 China OL966945 OL966956 OL989915 OL989919 OL989925
Clitocellacolorata BJTC FM1952 China OL966958 OL989916 OL989920 OL989926
Clitocellafallax CBS 605.79 AF357018
Clitocellafallax CBS 129.63 AF357017 AF223166 EF421018
Clitocellafallax K(M): 116541Spain KC816938 KC816847 KC816769
Clitocellafallax O-F88953Norway KC816936 KC816845 KC816767
Clitocellafallax 25668OKMUSA KC816937 KC816846 KC816768
Clitocellafallax ME Noordeloos 1997173Italy GQ289209 GQ289275
Clitocellafallax ME Noordeloos 200367Slovakia GQ289210 GQ289276
Clitocellamundula 7161 TJBUSA KC816952 KC816862 KC816782
ClitocellamundulaO-F19454Norway KC816954 KC816864 KC816784
Clitocellamundula O-F71544Norway KC816950 KC816860 KC816780
ClitocellamundulaAFTOL-ID 521USA KC816953 KC816863 KC816783
Clitocellamundula 7115 TJBUSA KC816951 KC816861 KC816781
Clitocellamundula K(M): 164736UK KC816949 KC816859 KC816779
ClitocellamundulaK(M): 49620UK KC816948 KC816858 KC816778
Clitocellamundula HMJAU 7274China MN065724 MN148161 MN166272 MN133781
Clitocellamundula HMJAU 7275China MN065723 MN148160 MN166271 MN133780
Clitocellamundula HMJAU 27014China MN065722 MN148159 MN166270 MN133779
Clitocellaborealichinensis BJTC FM1618 China OL966942 OL966946 OL989912 OL989922
Clitocellaborealichinensis BJTC FM1781 China OL966943 OL966957 OL989913 OL989917 OL989923
Clitocellaorientalis HKAS 75548China MN061333 MN065727 MN148164 MN166275 MN133784
Clitocellaorientalis HKAS 75664China MN061332 MN065726 MN148163 MN166274 MN133783
Clitocellaorientalis HKAS 77899China MN065725 MN148162 MN166273 MN133782
Clitocellaorientalis HKAS 78876China MN061334 MN065729 MN148166 MN166277 MN133786
Clitocellaorientalis (Holotype)HKAS 78763China MN065728 MN148165 MN166276 MN133785
Clitocellaorientalis BJTC FM1539 China OL966947 OL989911 OL989921
Clitocellapopinalis HBJU-550India KU561066
Clitocellapopinalis CBS 481.50UK FJ770397
Clitocellapopinalis KA12-1717Korea KR673647
Clitocellapopinalis RA802-3bUSA MK217434
Clitocellapopinalis Smith-2018 iNaturalist # 17340579USA MK573922
Clitocellapopinalis K(M): 143166UK KC816971 KC816878 KC816796
Clitocellapopinalis K(M): 167017UK KC816972 KC816879 KC816797
Clitocellapopinalis O-F63376Norway KC816974 KC816880 KC816799
Clitocellapopinalis 6378 TJBSwitzerland KC816976 KC816882 KC816801
Clitocellapopinalis O-F105360Norway KC816975 KC816881 KC816800
Clitocellapopinalis K(M): 146162UK KC816970 KC816877 KC816795
ClitocellapopinalisMC2-TRENTItaly KC816973 KC816798
ClitocellapopinalisME Noordeloos 9867Austria GQ289213 GQ289280
Clitocellapopinalis TB6378USA AF261285 GU384654
Clitocella. Mundula HMJAU 7275China MN061331
Clitocellaobscura MK09051302Czech Republic KX271753
Clitocellaprunulus G.v. Zanen F96065 KC885965
Clitocella_termitophila CORT014751Dominican Republic MN893319
Clitopilusbrunneiceps (Holotype)HKAS 104510China MN065684 MN148123 MN166234 MN133737
Clitopilusyunnanensis (Holotype)HKAS 104518China MN065698 MN148136 MN166247 MN133752
Clitopilus. Amarus A. d. Haan 98031 KC885963
Cltopilopsisalbida (Holotype)HKAS 104519China MN065730 MN148167 MN166278 MN133787
Lyophyllumdecastes Sundberg091007aJapan HM572548
Mycenapura CBH371Denmark KF913023
Rhodocybemellea CORT013885Dominican Republic MN784992
Rhodocybemellea JBSD127402Dominican Republic MN784993
Rhodocybemellea CORT014470Belize MN784994
Rhodocybemellea NYBG815044Costa Rica MN784995
Specimens used in molecular phylogenetic studies and their GenBank accession numbers. Newly generated sequences are in bold.

Phylogenetic analyses

The combined nrLSU-rpb2-tef1-atp6 dataset and ITS dataset were compiled to identify new species and to investigate their phylogenetic position in . For the combined nrLSU-rpb2-tef1-atp6 dataset, S.P. Jian & Zhu L. Yang was chosen as outgroups for individual (nrLSU, rpb2, tef1, atp6) or combined analyses (Jian et al. 2020). For ITS dataset (Pers.) P. Kumm. was selected as outgroup taxon (Baroni et al. 2020). The sequences of each marker (ITS, nrLSU, rpb2, tef1, atp6) were independently aligned in MAFFT v.7.110 (Katoh and Standley 2013) under default parameters. Ambiguously aligned sites were identified by Gblocks v.0.91b (Castresana 2000; using default options except “Allowed Gap Positions” = half) with default parameters (For ITS: 1137, nrLSU: 180, rpb2: 611, tef1: 166, atp6: 25 position were deleted). The software BioEdit 7.0.9 (Hall 1999) was used to manually check the aligned sequences. To examine the conflict among topologies with maximum likelihood (ML), separate single-gene analyses were conducted. Sequences were then concatenated. The ITS alignment can be found on Suppl. material 5. For the combined analyses, a partitioned mixed model was used by defining the sequences of nrLSU, rpb2, tef1, and atp6 as four independent partitions and each gene was separately estimated by different model parameters. Maximum Likelihood (ML) and Bayesian Inference (BI) analyses were conducted on the resulting concatenated dataset. Maximum Likelihood (ML) was performed using RAxML 8.0.14 (Stamatakis et al. 2005; Stamatakis 2006, 2014) by running 1000 bootstrap replicates under the GTRGAMMAI model (for all partitions). Bayesian Inference (BI) analysis was performed with MrBayes v3.1.2 (Ronquist and Huelsenbeck 2003) based on the best substitution models (GTR+I+G for ITS, GTR+I for nrLSU, SYM+G for rpb2, SYM+I+G for tef1, and GTR+G for atp6) determined by MrModeltest 2.3 (Nylander 2004). Two independent runs with four Markov chains were conducted for 10 M generations under the default settings. Average standard deviations of split frequency (ASDSF) values were far lower than 0.01 at the end of the runs. Trees were sampled every 100 generations after burn-in (25% of trees were discarded as the burn-in phase of the analyses, set up well after convergence), and a 70% majority-rule consensus tree was constructed. Trees were visualized with TreeView32 (Page 2001). Bootstrap values (BS) ≥ 70% and Bayesian Posterior Probability values (BPP) ≥ 0.95 were considered significant (Hillis and Bull 1993; Alfaro et al. 2003).

Results

Phylogenetic analysis

Twenty-eight sequences were newly generated from our six collections in this study. Two datasets, nrLSU-rpb2-tef1-atp6 combined dataset and ITS dataset were compiled to investigate the phylogenetic position of these species. For the combined dataset, the phylogenetic trees based on individual loci (including nrLSU, rpb2, tef1, atp6) showed the almost same major clades (Suppl. material 1–4: Figs S1–S4) as that of the combined dataset (Fig. 1). There was no strongly supported conflict between single gene phylogenies, except for the nrLSU phylogeny does not resolve and , while the atp6 phylogeny does not resolve and the new species . So here the combined dataset was used to infer the phylogenetic placement of species. The final combined nrLSU-rpb2-tef1-atp6 dataset contained 2963 total characters (905 from nrLSU, 599 from rpb2, 1010 from tef1, 449 from atp6, gaps included) and included 40 samples of 11 taxa. The topologies of ML and BI phylogenetic trees obtained in this study were practically the same, therefore only the tree inferred from the ML analysis is shown (Fig. 1). Except for the species T.J. Baroni & Angelini, members of in the dataset formed a monophyletic lineage with strong support (MLB = 98%, BPP = 1.00). was sister to all other species of but without strong support. Of our six collections, the sequences of a collection (BJTC FM1539) grouped in the clade S.P. Jian & Zhu L. Yang, indicating it is identity with this species. The remaining specimens fell in two strongly supported clades, one comprised of two collections was described as the new species and another comprised of three collections was described as the new species together with a collection from USA (AFTOL-ID 521) originally labelled as . was sister to with strong support, implying is closely related to . further clustered with and (Fr.) Kluting, T.J. Baroni & Bergemann. One collection from Norway (O-F19454), which is labelled as , formed an independent clade.
Figure 1.

Phylogeny derived from Maximum Likelihood analysis of the combined nrLSU-rpb2-tef1-atp6 dataset of and related genera in the family . was employed to root the tree as an outgroup. Numbers representing likelihood bootstrap support (BS≥ 70%, left) and significant Bayesian posterior probability (BPP≥ 0.95, right) are indicated above the nodes. New sequences are highlighted in bold.

Phylogeny derived from Maximum Likelihood analysis of the combined nrLSU-rpb2-tef1-atp6 dataset of and related genera in the family . was employed to root the tree as an outgroup. Numbers representing likelihood bootstrap support (BS≥ 70%, left) and significant Bayesian posterior probability (BPP≥ 0.95, right) are indicated above the nodes. New sequences are highlighted in bold. The ITS dataset comprised 27 samples of 11 taxa and 662 characters. The topology of phylogenetic trees based on the ITS dataset generated from ML and BI analyses were almost identical and only the tree inferred from the ML analysis is shown (Fig. 2). The sequences of the new species formed an independent and strong support branch, like that of multilocus phylogeny (Fig. 1), supporting it is a distinct species. The sequences of the new species together with five sequences labelled as from India, South Korea, UK and USA formed an independent and strong support branch, indicating they represented a distinct species.
Figure 2.

Phylogeny derived from Maximum Likelihood analysis of the ITS sequences from and related genera in the family . was employed to root the tree as an outgroup. Numbers representing likelihood bootstrap support (BS≥ 70%, left) and significant Bayesian posterior probability (BPP≥ 0.95, right) are indicated above the nodes. New sequences are highlighted in bold.

Phylogeny derived from Maximum Likelihood analysis of the ITS sequences from and related genera in the family . was employed to root the tree as an outgroup. Numbers representing likelihood bootstrap support (BS≥ 70%, left) and significant Bayesian posterior probability (BPP≥ 0.95, right) are indicated above the nodes. New sequences are highlighted in bold.

Taxonomy

L. Fan & N. Mao sp. nov. 13FE74D4-F341-5085-925E-6F2DF09CB4E3 843689 Figs 3a , 4 , 6a, b
Figure 3.

Basidiomata of a (BJTC FM1781, holotype) b-d (b BJTC FM1593 c BJTC FM1952 d BJTC FM1891, holotype) Scale bars: 10 mm (a–d). Photos by JingZhong Cao

Figure 4.

Microscopy of a basidiospores b basidia c pileipellis. Scale bars: 5 μm (a); 10 μm (b, c). Drawings by Ning Mao.

Figure 6.

Basidiospores of species in . revealed by SEMa, bc, d Scale bars: 3 μm (a, b); 5 μm (c, d). Photos by Li Fan.

Etymology.

borealichinensis, referring to north China as the place of origin.

Holotype.

China. Shanxi Province, Qinshui County, Lishan Mountain, , alt. 1150m, 26 July 2021, on the ground in broad-leaved forest dominated by sp., N. Mao MNM340 (BJTC FM1781). Basidiomata of a (BJTC FM1781, holotype) b-d (b BJTC FM1593 c BJTC FM1952 d BJTC FM1891, holotype) Scale bars: 10 mm (a–d). Photos by JingZhong Cao

Diagnosis.

is characterized by its clitocyboid basidiomata, globose to subglobose, occasionally broadly ellipsoid basidiospores, the absence of hymenial cystidia and clamp connection, and usually growing in broad-leaved forests. It is most similar to but differs from it by the slightly smaller basidiospores, non-gelatinized hyphae of pileipellis and stipitipellis with pale brown to brown intracellular or parietal pigment. Microscopy of a basidiospores b basidia c pileipellis. Scale bars: 5 μm (a); 10 μm (b, c). Drawings by Ning Mao.

Description.

Basidiomata clitocyboid, small to medium-sized. Pileus 13–50 mm wide, low convex to plane convex when young, then slightly depressed at center; surface smooth, grayish white (#f2f2f2) to pale white (#ffffff), yellowish white (#ffcd9a); margin incurved, non-striate; context thin pale white, 1.0–1.2 mm thick. Lamellae decurrent, grayish white (#f2f2f2), pale yellow (#fff3e7), crowded, edges smooth, thin and fragile, lamellulae numerous and concolorous with lamellae. Stipe 20–32 × 2–8 mm, central to eccentric, occasionally lateral, cylindrical to subcylindrical, equal or sometimes slightly tapering at base, pale white (#ffffff), smooth or tomentose, usually with white rhizomorphs. Odor unrecorded. Taste not recorded. Chemical color reaction: not reacting with KOH 3% at pileus of dried specimens. Basidiospores [60/2/2] (3.8–)4–5(–5.5) × 3.8–4.5 μm, Lm × Wm = 4.61 (± 0.42) × 4.06 (± 0.18), Q = 0.95–1.25 (Qav = 1.13 ± 0.10), hyaline, globose to subglobose, occasionally broadly ellipsoid in profile view, slightly angled in polar or face view with obscure minute pustules or bumps. Basidia 17–25 × 5–6(–7) μm, clavate, hyaline, four spored, rarely two spored; sterigmata 2–4 μm long. Lamellar trama more or less regular, composed of 3–8 μm wide hyaline hyphae, subhymenium consisting of filamentous hyphal segments. Lamellae edges fertile. Pleurocystidia and cheilocystidia absent. Pileipellis a cutis composed of more or less radially, loosely arranged, non-gelatinized, smooth, cylindrical hyphae, 2–6 μm wide and with pale brown to brown intracellular or parietal pigment; terminal hyphae subcylindric, narrowly clavate, occasionally irregular, 3–5 μm wide; subcutis made up of subparallel, compactly arranged, thin-walled, hyaline, smooth, cylindrical hyphae, 3–6 μm wide; pileal trama composed of interwoven, cylindrical hyphae, 2.5–10 μm wide. Stipitipellis a cutis composed of parallel, compactly arranged, thin-walled, non-gelatinized, hyaline hyphae, 2.5–6 μm wide. Stipititrama composed of interwoven, hyaline, cylindrical hyphae, 3–10 μm wide. Caulocystidia absent. Clamp connections absent.

Habit.

Scattered or in groups on soil in broad-leaved () forest, Shanxi province, China.

Additional specimens examined.

China. Shanxi province, Xia County, alt. 970m, 7 October 2020, N. Mao MNM172 (BJTC FM1618).

Note.

is easily confused with , (Pilát) Vizzini et al. and Silva-Filho & Cortez in morphology because they are all have white to grayish white pileus and decurrent lamellae. However, differs from by its viscid pileus and stipe when wet, gelatinized pileipellis and stipitipellis, and slightly larger basidiospores of (4–)4.5–6 × 4–5 μm (Jian et al. 2020). produce a distinctly reddish reaction when 3% KOH is placed on the pileus surface (Baroni 1981; as ) while has not that kind of reaction. differs by its pale grey to yellowish white stipe (Silva-Filho et al. 2018; Jian et al. 2020). and clustered with in our multilocus phylogeny (Fig. 1), indicating they are phylogenetically closely related to each other. Morphologically, differs from by its yellowish gray or brown to dark smoke gray pileus and slightly larger basidiospores of (4–)4.5–6(–6.5) × 4–5 μm (Jian et al. 2020), by its brown to grayish brown pileus, bigger basidiospores of 5.5–7–5–5.5 μm, and its pileus surface produces a reddish reaction in 3% KOH (Baroni 1981; as ). Moreover, DNA analysis also revealed that shared less than 91.10% similarity in tef1 sequence with and 91.20% similarity with , supporting their separation. L. Fan & N. Mao sp. nov. BBADB941-F329-5682-AA9B-0FCCE043FCE2 843690 Figs 3b–d , 5 , 6c, d
Figure 5.

Microscopy of a basidiospores b basidia c pileipellis. Scale bars: 10 μm (a, c); 5 μm (b). Drawings by Ning Mao.

colorata, referring to the colorful pileus. China. Shanxi Province, Pu County, Wulushan Mountain, , alt. 1740 m, 28 July 2021, on the ground in coniferous forest dominated by Franch., N. Mao MNM292 (BJTC FM1891). Microscopy of a basidiospores b basidia c pileipellis. Scale bars: 10 μm (a, c); 5 μm (b). Drawings by Ning Mao. is characterized by its clitocyboid basidiomata, relatively colorful pileus (white to yellowish white, grayish white to grayish brown, pink white), globose or subglobose to broadly ellipsoid basidiospores, hyphae of pileipellis with pale yellow to yellowish brown intracellular or parietal pigment, the absence of hymenial cystidia and clamp connection. It is most similar to and but differs from by its slightly smaller basidiospores, only appearing in the forest and genetic profile, and from by its colorful pileus (white to yellowish white, grayish white to grayish brown, pink white). Basidiospores of species in . revealed by SEMa, bc, d Scale bars: 3 μm (a, b); 5 μm (c, d). Photos by Li Fan. Basidiomata clitocyboid, small to large. Pileus 20–62 mm wide, dry,convex to plano-convex, sometimes infundibuliform, with a shallow depression at the center; margin not striate, often enrolled or flat, sometimes slightly uplifted; surface white (#ffffff) to yellowish white (#ffffe7), grayish white (#f2f2f2) to grayish brown (#dba773), pink white (#fff3f5); context white (#ffffff) to grayish white (#f2f2f2), 1.0–1.5 mm thick. Lamellae decurrent, white (#ffffff) to yellowish white(#fff3e7), becoming yellowish brown (#e0b487) on drying, crowded, 1.0–2.0 mm deep, edges entire and concolorous, thin and fragile, lamellulae in 2–4 tiers of varying lengths. Stipe 22–42 × 4–10 mm, central, cylindrical, equal, pale white (#ffffff) to yellowish brown (#e0b487), smooth, usually with white rhizomorphs. Odor unrecorded. Taste not recorded. Chemical color reaction: pileal surface of dried samples negative with 3% KOH. Basidiospores [100/5/2] (3.8–)4.5–5.5(–6.0) × (3.5–)4–4.8(–5.0) μm; Lm × Wm = 4.90 (± 0.44) × 4.29 (± 0.35), Q = 1.00–1.25 (Qav = 1.14 ± 0.09); hyaline, globose or subglobose to broadly ellipsoid in profile view, slightly angled in polar or face view with obscure minute pustules or bumps. Basidia 20–30 × (4.5–)5–6.5 μm, clavate, hyaline, with four spored, rarely two spored; sterigmata 2–3.5 μm long. Lamellar trama composed of subparallel, hyaline, cylindrical hyphae, 2.5–6 μm wide, subhymenium consisting of filamentous hyphal segments, 2–3.5 μm wide. Lamellae edges fertile. Pleurocystidia and cheilocystidia absent. Pileipellis a cutis composed of parallel, compactly arranged, non-gelatinized, smooth, cylindrical hyphae, 2–5 μm wide, with pale yellow to yellowish brown intracellular or parietal pigment; subcutis made up of interwoven, slightly loosely arranged, hyaline, smooth, cylindrical hyphae, 3–6.5 μm wide; pileal trama composed of parallel, compactly arranged, hyaline, cylindrical hyphae, 3–10 μm wide. Stipitipellis a cutis composed of parallel, compactly arranged, thin-walled, non-gelatinized, cylindrical hyphae, 2–5 μm wide, heavily or moderately encrusted with brown pigment. Stipititrama composed of parallel, compactly arranged, hyaline, cylindrical hyphae, 3–7 μm wide. Caulocystidia absent. Clamp connections absent. Scattered or in groups on soil or rotten wood in coniferous () or broad-leaved () forest, Shanxi province, China. China. Shanxi province, Pu County, Wulushan Mountains, alt. 1750m, 28 July 2021, N. Mao MNM293 (BJTC FM1892); Wenshui County, alt. 1760m, 30 July 2021, L. Fan CF1219 (BJTC FM1952); Xia County, alt. 931m, 6 October 2020, N. Mao MNM102 (BJTC FM1593); Xia County, alt. 931m, 6 October 2020, N. Mao MNM103 (BJTC FM1594).

Notes.

Morphologically, is easily confused with and . However, according to Baroni (1981; as ), the pileus surface in and can produce a reddish reaction in 3% KOH, whereas that is not exhibited in . The basidiospores of , 5.5–7 × 5–5.5 μm (Baroni 1981; Kluting et al. 2014; Jian et al. 2020), are broader and longer than those of (4.5–5.5 ×4–4.8 μm). DNA analysis revealed that shared less than 87.80% similarity in tef1 sequence with and 86.10% similarity with , supporting their separation. Moreover, five ITS sequences (FJ770397, KR673647, KU561066, MK217434 and MK573922) labelled “” from India, Norway, South Korea, UK and USA are probably conspecific to the new species as they clustered together with in ITS tree (Fig. 2) and have more than 98.4% similarity in ITS region. However, these “” collections still need more other DNA regions and detailed morphology to support this view. One collection of “,” namely, AFTOLID 521 from Norway, should be re-identified as it clustered together with in the combined nrLSU-rpb2-tef1-atp6 tree (Fig. 1) and have more than 98.1% similarity in tef1 region. These showed that the new species maybe have a wide geographical distribution. Although is sister to with strong support, these two species have obvious differences in morphology. The pileus and stipe of are usually viscid when wet and have gelatinized pileipellis and stipitipellis. has non-gelatinized pileipellis and stipitipellis, and its pileus is more colorful and darker (Jian et al. 2020). DNA analysis revealed that shared less than 95.80% similarity in tef1 sequence with and 90.20% similarity in ITS sequence. Moreover, has a wider distribution range than , which is only distributed in China.

Discussion

Three species of are confirmed from Shanxi Province, north China in this study. Of them, is the most commonly encountered species, which distributes across the provincial area and grows in almost all kinds of forest. and are probably limited in southern Shanxi province, and they usually occur in the spp. forests. ITS gene is rarely used in the species classification of in previous studies because it contains many ambiguous sites. In the contrast, the partial sequences of three protein-coding genes (the atp6, rpb2 and tef1) are usually used to infer the phylogeny of (Kluting et al. 2014; Baroni et al. 2020; Jian et al. 2020). However, we found that ITS, rpb2, and tef1 gene tree are similar to the combined (nrLSU-rpb2-tef1-atp6) gene regions tree when we performed phylogenetic tree construction respectively using the ITS, nrLSU, rpb2, tef1 and atp6 gene of (Fig. 2, Suppl. material 1–4: Figs S1–S4). DNA analysis also showed that the intraspecific similarity of the ITS region is ≥ 98.4% and of tef1 gene is ≥ 98.1%, the interspecific similarity of ITS region is ≤ 96.1% and of tef1 is ≤ 95.9% (Table 2, Table 3). But for the rpb2 gene, the intraspecific variation of is more than the interspecific variation of and (Table 4). Therefore, we consider that both the ITS and tef1 may be more effective for the classification of species.
Table 2.

Interspecific variation and intraspecific variation of ITS in species.

SpeciesNumber (n)Intraspecific variation (%)Interspecific variation (%)
Clitocellacolorata 9< 1.6%> 3.9%
C.fallax 3< 0.3%> 11.8%
C.mundula 1> 6.0%
C.borealichinensis 2> 9.6%
C.obscura 1> 6.6%
C.orientalis 3< 0.9%> 3.9%
Table 3.

Interspecific variation and intraspecific variation of tef1 in species.

SpeciesNumber (n)Intraspecific variation (%)Interspecific variation (%)
Clitocellacolorata 4< 1.9%> 4.1%
C.fallax a 1> 9.8%
C.fallax b 2< 0.1%> 9.8%
C.mundula 6< 0.3%> 7.5%
C.mundulac1> 4.7%
C.borealichinensis 1> 8.4%
C.orientalis 3< 0.1%> 4.1%
C.popinalis 7> 4.7%

a represents voucher 25668OKM; b represents voucher O-F88953, K(M): 116541; c represents voucher O-F19454

Table 4.

Interspecific variation and intraspecific variation of rpb2 in species.

SpeciesNumber (n)Intraspecific variation (%)Interspecific variation (%)
Clitocellacolorata 4< 0.7%> 1.7%
C.fallax a 1> 4.0%
C.fallax b 4< 0.1%> 5.1%
C.fallax c 1> 4.0%
C.mundula 6< 2.1%> 4.9%
C.mundulad1> 2.2%
C.borealichinensis 2> 5.5%
C.orientalis 6< 0.5%> 1.7%
C.popinalis 9< 0.4%> 2.2%
C.termitophila 1> 16.9%

a represents voucher 25668OKM; b represents voucher O-F88953, K(M): 116541, CBS 129.63, ME Noordeloos 1997173; c represents voucher ME Noordeloos 200367; d represents voucher O-F19454.

Interspecific variation and intraspecific variation of ITS in species. Interspecific variation and intraspecific variation of tef1 in species. a represents voucher 25668OKM; b represents voucher O-F88953, K(M): 116541; c represents voucher O-F19454 Our molecular phylogenetic analysis (Fig. 1) revealed that one Norway collection O-F19454, which is labelled as , formed an independent clade, and it shared less than 93.40% similarity in tef1 sequence with other species. These show that it probably represents a new species of . The sequences of formed two or three (in rpb2 phylogeny) independent branches in our phylogenetic analyses (Fig. 2, Suppl. material 1–4: Figs S1–S4), and the similarity between the branches is less than 90.2% in tef1 sequence and 94.9% in rpb2 sequence. These indicate that these specimens of probably represented two or three species. The specimens of should be therefore re-examined to resolve this taxonomic issue. is not clustered in the genus (Fig. 1). Moreover, in the rpb2 gene tree did not gather with , or but formed a single branch (Suppl. material 2: Fig. S2). These indicate that probably represents a potential taxonomic position rather than the species of . Interspecific variation and intraspecific variation of rpb2 in species. a represents voucher 25668OKM; b represents voucher O-F88953, K(M): 116541, CBS 129.63, ME Noordeloos 1997173; c represents voucher ME Noordeloos 200367; d represents voucher O-F19454.
1Basidiomata clitocyboid 2
Basidiomata pleurotoid C.termitophila * (Baroni et al. 2020)
2Pileus surface gray, dark gray, pale yellow to yellowish brown, pigments present in pileipelli 3
Pileus surface almost white to pastel gray, pigments absent in pileipellis 8
3Basidiospores globose to subglobose 4
Basidiospores ellipsoid 7
4Pileus surface of dried samples with a positive KOH reaction 5
Pileus surface of dried samples with a negative KOH reaction 6
5Occurring in grassland systemsC.popinalis*(Baroni 1981; Kluting et al. 2014; Jian et al. 2020)
Occurring in forested systemsC.mundula*(Baroni 1981; Kluting et al. 2014; Jian et al. 2020)
6Pileus color with pink tingesC.colorata*
Pileus color without pink tingesC.borealichinensis*
7Pileus color with yellow tinges, basidiospores small, 5–8 × 3.5–5.5 μm C.himantiigena (Silva-Filho et al. 2018)
Pileus color without yellow tinges, basidiospores large, 7–9 × 5–6 μm C.ammophila (Contu 1999)
8Basidiospores globose to subglobose or ovatae 9
Basidiospores amygdaliform to ellipsoid 11
9Basidia long, length > 40 μm C.nigrescens (Maire 1945)
Basidia short, length < 28 μm 10
10Pileus infundibuliform to plano-convex, basidiospores 4–5 × 3–4.5 μm C.pallescens (Silva-Filho et al. 2018; Jian et al. 2020)
Pileus convex to plane, basidiospores (4–)4.5–6 × 4–5 μmC.orientalis* (Jian et al. 2020)
11Basidiospores small, 5–6.2 × 2.5–3.6 μm C.blancii (Contu 2009)
Basidiospores large, 6.5–8 × 4–5 μmC.fallax* (Jian et al. 2020)
  15 in total

1.  Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis.

Authors:  J Castresana
Journal:  Mol Biol Evol       Date:  2000-04       Impact factor: 16.240

2.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

3.  RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees.

Authors:  A Stamatakis; T Ludwig; H Meier
Journal:  Bioinformatics       Date:  2004-12-17       Impact factor: 6.937

4.  RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2006-08-23       Impact factor: 6.937

5.  Contributions of rpb2 and tef1 to the phylogeny of mushrooms and allies (Basidiomycota, Fungi).

Authors:  P Brandon Matheny; Zheng Wang; Manfred Binder; Judd M Curtis; Young Woon Lim; R Henrik Nilsson; Karen W Hughes; Valérie Hofstetter; Joseph F Ammirati; Conrad L Schoch; Ewald Langer; Gitta Langer; David J McLaughlin; Andrew W Wilson; Tobias Frøslev; Zai-Wei Ge; Richard W Kerrigan; Jason C Slot; Zhu-Liang Yang; Timothy J Baroni; Michael Fischer; Kentaro Hosaka; Kenji Matsuura; Michelle T Seidl; Jukka Vauras; David S Hibbett
Journal:  Mol Phylogenet Evol       Date:  2006-09-23       Impact factor: 4.286

6.  Toward a stable classification of genera within the Entolomataceae: a phylogenetic re-evaluation of the Rhodocybe-Clitopilus clade.

Authors:  Kerri L Kluting; Timothy J Baroni; Sarah E Bergemann
Journal:  Mycologia       Date:  2014-07-01       Impact factor: 2.696

7.  Clitopilus, Clitocella, and Clitopilopsis in China.

Authors:  Si-Peng Jian; Tolgor Bau; Xue-Tai Zhu; Wang-Qiu Deng; Zhu L Yang; Zhi-Wei Zhao
Journal:  Mycologia       Date:  2020-03-02       Impact factor: 2.696

8.  ITS primers with enhanced specificity for basidiomycetes--application to the identification of mycorrhizae and rusts.

Authors:  M Gardes; T D Bruns
Journal:  Mol Ecol       Date:  1993-04       Impact factor: 6.185

9.  Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence.

Authors:  Michael E Alfaro; Stefan Zoller; François Lutzoni
Journal:  Mol Biol Evol       Date:  2003-02       Impact factor: 16.240

10.  RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2014-01-21       Impact factor: 6.937

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.