Literature DB >> 35582545

Application of Principal Component Analysis (PCA) to the Evaluation and Screening of Multiactivity Fungi.

Zonglin Yang1,2, Yaqi Shi1,2, Pinglin Li3,4, Kanghong Pan1,2, Guoqiang Li3,4, Xianguo Li1,2, Shuo Yao1,2, Dahai Zhang1,2.   

Abstract

Continued innovation in screening methodologies remains important for the discovery of high-quality multiactive fungi, which have been of great significance to the development of new drugs. Mangrove-derived fungi, which are well recognized as prolific sources of natural products, are worth sustained attention and further study. In this study, 118 fungi, which mainly included Aspergillus spp. (34.62%) and Penicillium spp. (15.38%), were isolated from the mangrove ecosystem of the Maowei Sea, and 83.1% of the cultured fungi showed at least one bioactivity in four antibacterial and three antioxidant assays. To accurately evaluate the fungal bioactivities, the fungi with multiple bioactivities were successfully evaluated and screened by principal component analysis (PCA), and this analysis provided a dataset for comparing and selecting multibioactive fungi. Among the 118 mangrove-derived fungi tested in this study, Aspergillus spp. showed the best comprehensive activity. Fungi such as A. clavatonanicus, A. flavipes and A. citrinoterreus, which exhibited high comprehensive bioactivity as determined by the PCA, have great potential in the exploitation of natural products and the development of new drugs. This study demonstrated the first use of PCA as a time-saving, scientific method with a strong ability to evaluate and screen multiactive fungi, which indicated that this method can affect the discovery and development of new drugs. © Ocean University of China, Science Press and Springer-Verlag GmbH Germany 2022.

Entities:  

Keywords:  activity evaluation; biological activity; fungi; mangrove ecosystem; principal component analysis

Year:  2022        PMID: 35582545      PMCID: PMC9098371          DOI: 10.1007/s11802-022-5096-x

Source DB:  PubMed          Journal:  J Ocean Univ China        ISSN: 1672-5182            Impact factor:   0.913


  35 in total

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Authors:  Yi He; Bin Wang; Wanping Chen; Russell J Cox; Jingren He; Fusheng Chen
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2.  Antibacterial and Antioxidant Constituents of Extracts of Endophytic Fungi Isolated from Ocimum basilicum var. thyrsiflora Leaves.

Authors:  Piyamas Atiphasaworn; Sakon Monggoot; Eleni Gentekaki; Siraprapa Brooks; Patcharee Pripdeevech
Journal:  Curr Microbiol       Date:  2017-07-12       Impact factor: 2.188

3.  Purification and characterization of a new L-methioninase from solid cultures of Aspergillus flavipes.

Authors:  Ashraf S A El-Sayed
Journal:  J Microbiol       Date:  2011-03-03       Impact factor: 3.422

4.  Endocrine activity in an urban river system and the biodegradation of estrogen-like endocrine disrupting chemicals through a bio-analytical approach using DRE- and ERE-CALUX bioassays.

Authors:  T Vandermarken; K Croes; K Van Langenhove; I Boonen; P Servais; T Garcia-Armisen; N Brion; M S Denison; L Goeyens; M Elskens
Journal:  Chemosphere       Date:  2018-03-07       Impact factor: 7.086

5.  In vitro antibacterial activity of AZD0914, a new spiropyrimidinetrione DNA gyrase/topoisomerase inhibitor with potent activity against Gram-positive, fastidious Gram-Negative, and atypical bacteria.

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Journal:  Antimicrob Agents Chemother       Date:  2014-11-10       Impact factor: 5.191

6.  Preparation, Structure, and Potent Antifouling Activity of Sclerotioramine Derivatives.

Authors:  Mei-Yan Wei; Cui-Fang Wang; Kai-Ling Wang; Pei-Yuan Qian; Chang-Yun Wang; Chang-Lun Shao
Journal:  Mar Biotechnol (NY)       Date:  2017-07-07       Impact factor: 3.619

7.  Flavimycins A and B, dimeric 1,3-dihydroisobenzofurans with peptide deformylase inhibitory activity from Aspergillus flavipes.

Authors:  Yun-Ju Kwon; Mi-Jin Sohn; Chang-Jin Kim; Hiroyuki Koshino; Won-Gon Kim
Journal:  J Nat Prod       Date:  2012-02-13       Impact factor: 4.050

8.  Diaporisoindoles A-C: Three Isoprenylisoindole Alkaloid Derivatives from the Mangrove Endophytic Fungus Diaporthe sp. SYSU-HQ3.

Authors:  Hui Cui; Yun Lin; Mingchu Luo; Yongjun Lu; Xishan Huang; Zhigang She
Journal:  Org Lett       Date:  2017-09-29       Impact factor: 6.005

9.  Effective Agrobacterium-mediated transformation protocols for callus and roots of halophyte ice plant (Mesembryanthemum crystallinum).

Authors:  Hau-Hsuan Hwang; Chih-Hao Wang; Hsiao-Huei Chen; Jia-Fang Ho; Shin-Fei Chi; Fan-Chen Huang; Hungchen Emilie Yen
Journal:  Bot Stud       Date:  2019-01-07       Impact factor: 2.787

10.  Isolation and molecular characterization of mycotoxigenic fungi in agarwood.

Authors:  Rashad R Al-Hindi; Soher E Aly; Amal S Hathout; Mona G Alharbi; Saad Al-Masaudi; Soad K Al-Jaouni; Steve M Harakeh
Journal:  Saudi J Biol Sci       Date:  2017-07-26       Impact factor: 4.219

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