| Literature DB >> 35571720 |
Wenle Li1,2, Wencai Liu3, Fida Hussain Memon4,5, Bing Wang2, Chan Xu2, Shengtao Dong6, Haosheng Wang7, Zhaohui Hu8, Xubin Quan8,9, Yizhuo Deng8,10, Qiang Liu1, Shibin Su11, Chengliang Yin12.
Abstract
Background: Lung metastasis greatly affects medical therapeutic strategies in osteosarcoma. This study aimed to develop and validate a clinical prediction model to predict the risk of lung metastasis among osteosarcoma patients based on machine learning (ML) algorithms.Entities:
Mesh:
Year: 2022 PMID: 35571720 PMCID: PMC9106476 DOI: 10.1155/2022/2220527
Source DB: PubMed Journal: Comput Intell Neurosci
Baseline data table of the training group and the validation group.
| Level | Overall ( | Multicenter (validation group, | SEER (training group, |
| |
|
| |||||
| Race (%) | Black | 163 (13.57) | 0 (0.00) | 163 (14.90) | <0.0001 |
| Other | 216 (17.99) | 107 (100.00) | 109 (9.96) | ||
| White | 822 (68.44) | 0 (0.00) | 822 (75.14) | ||
|
| |||||
| Age (median [IQR]) | NA | 21.000 [13.000, 53.000] | 18.000 [13.000, 48.500] | 22.000 [13.000, 53.750] | 0.3895 |
|
| |||||
| Sex (%) | Female | 549 (45.71) | 50 (46.73) | 499 (45.61) | 0.9048 |
| Male | 652 (54.29) | 57 (53.27) | 595 (54.39) | ||
|
| |||||
| Primary site (%) | Axis bone | 313 (26.06) | 25 (23.36) | 288 (26.33) | 0.374 |
| Limb bone | 787 (65.53) | 76 (71.03) | 711 (64.99) | ||
| Other | 101 (8.41) | 6 (5.61) | 95 (8.68) | ||
|
| |||||
| Grade (%) | Moderately differentiated | 41 (3.41) | 0 (0.00) | 41 (3.75) | 0.0934 |
| Poorly differentiated | 294 (24.48) | 22 (20.56) | 272 (24.86) | ||
| Undifferentiated; anaplastic | 553 (46.04) | 49 (45.79) | 504 (46.07) | ||
| Unknown | 286 (23.81) | 34 (31.78) | 252 (23.03) | ||
| Well differentiated | 27 (2.25) | 2 (1.87) | 25 (2.29) | ||
|
| |||||
| Laterality (%) | Left | 514 (42.80) | 40 (37.38) | 474 (43.33) | 0.0524 |
| Not a paired site | 161 (13.41) | 9 (8.41) | 152 (13.89) | ||
| Right | 526 (43.80) | 58 (54.21) | 468 (42.78) | ||
|
| |||||
| T (%) | T1 | 420 (34.97) | 38 (35.51) | 382 (34.92) | 0.1914 |
| T2 | 562 (46.79) | 44 (41.12) | 518 (47.35) | ||
| T3 | 40 (3.33) | 7 (6.54) | 33 (3.02) | ||
| TX | 179 (14.90) | 18 (16.82) | 161 (14.72) | ||
|
| |||||
| N (%) | N0 | 1088 (90.59) | 91 (85.05) | 997 (91.13) | 0.12 |
| N1 | 36 (3.00) | 5 (4.67) | 31 (2.83) | ||
| NX | 77 (6.41) | 11 (10.28) | 66 (6.03) | ||
|
| |||||
| Surgery (%) | No | 225 (18.73) | 23 (21.50) | 202 (18.46) | 0.5241 |
| Yes | 976 (81.27) | 84 (78.50) | 892 (81.54) | ||
|
| |||||
| Radiation (%) | No | 1054 (87.76) | 100 (93.46) | 954 (87.20) | 0.0837 |
| Yes | 147 (12.24) | 7 (6.54) | 140 (12.80) | ||
|
| |||||
| Chemotherapy (%) | No | 236 (19.65) | 10 (9.35) | 226 (20.66) | 0.0073 |
| Yes | 965 (80.35) | 97 (90.65) | 868 (79.34) | ||
|
| |||||
| Bone metastases (%) | No | 1144 (95.25) | 102 (95.33) | 1042 (95.25) | 1 |
| Yes | 57 (4.75) | 5 (4.67) | 52 (4.75) | ||
|
| |||||
| Lung metastases (%) | No | 987 (82.18) | 87 (81.31) | 900 (82.27) | 0.9085 |
| Yes | 214 (17.82) | 20 (18.69) | 194 (17.73) | ||
|
| |||||
| Times (median [IQR]) | NA | 24.000 [12.000, 48.000] | 23.000 [11.000, 51.500] | 24.000 [12.000, 47.000] | 0.9754 |
Abbreviation: SEER, Surveillance Epidemiology and End Results; IQR, interquartile range; T, tumor; N, lymph node.
Baseline data for patients presenting with and without lung metastases.
| Level | Overall ( | No ( | Yes ( |
| |
|---|---|---|---|---|---|
| Race (%) | Black | 163 (13.6) | 132 (13.4) | 31 (14.5) | 0.847 |
| Other | 216 (18.0) | 176 (17.8) | 40 (18.7) | ||
| White | 822 (68.4) | 679 (68.8) | 143 (66.8) | ||
| Age (mean (SD)) | NA | 32.98 (24.08) | 32.83 (23.67) | 33.69 (25.93) | 0.637 |
|
| |||||
| Sex (%) | Female | 549 (45.7) | 471 (47.7) | 78 (36.4) | 0.003 |
| Male | 652 (54.3) | 516 (52.3) | 136 (63.6) | ||
|
| |||||
| Primary site (%) | Axis bone | 313 (26.1) | 263 (26.6) | 50 (23.4) | 0.468 |
| Limb bone | 787 (65.5) | 639 (64.7) | 148 (69.2) | ||
| Other | 101 (8.4) | 85 (8.6) | 16 (7.5) | ||
|
| |||||
| Grade (%) | Moderately differentiated | 41 (3.4) | 36 (3.6) | 5 (2.3) | 0.206 |
| Poorly differentiated | 294 (24.5) | 236 (23.9) | 58 (27.1) | ||
| Undifferentiated; anaplastic | 553 (46.0) | 450 (45.6) | 103 (48.1) | ||
| Unknown | 286 (23.8) | 239 (24.2) | 47 (22.0) | ||
| Well differentiated | 27 (2.2) | 26 (2.6) | 1 (0.5) | ||
|
| |||||
| Laterality (%) | Left | 514 (42.8) | 425 (43.1) | 89 (41.6) | 0.426 |
| Not a paired site | 161 (13.4) | 137 (13.9) | 24 (11.2) | ||
| Right | 526 (43.8) | 425 (43.1) | 101 (47.2) | ||
|
| |||||
| Stage group (%) | I | 198 (16.5) | 194 (19.7) | 4 (1.9) | <0.001 |
| II | 562 (46.8) | 550 (55.7) | 12 (5.6) | ||
| III | 51 (4.2) | 50 (5.1) | 1 (0.5) | ||
| IV | 278 (23.1) | 83 (8.4) | 195 (91.1) | ||
| UNK stage | 112 (9.3) | 110 (11.1) | 2 (0.9) | ||
|
| |||||
| T (%) | T1 | 420 (35.0) | 382 (38.7) | 38 (17.8) | <0.001 |
| T2 | 562 (46.8) | 448 (45.4) | 114 (53.3) | ||
| T3 | 40 (3.3) | 25 (2.5) | 15 (7.0) | ||
| TX | 179 (14.9) | 132 (13.4) | 47 (22.0) | ||
|
| |||||
| N (%) | N0 | 1088 (90.6) | 913 (92.5) | 175 (81.8) | <0.001 |
| N1 | 36 (3.0) | 24 (2.4) | 12 (5.6) | ||
| NX | 77 (6.4) | 50 (5.1) | 27 (12.6) | ||
|
| |||||
| M (%) | M0 | 931 (77.5) | 911 (92.3) | 20 (9.3) | <0.001 |
| M1 | 270 (22.5) | 76 (7.7) | 194 (90.7) | ||
|
| |||||
| Surgery (%) | No | 225 (18.7) | 143 (14.5) | 82 (38.3) | <0.001 |
| Yes | 976 (81.3) | 844 (85.5) | 132 (61.7) | ||
|
| |||||
| Radiation (%) | No | 1054 (87.8) | 878 (89.0) | 176 (82.2) | 0.009 |
| Yes | 147 (12.2) | 109 (11.0) | 38 (17.8) | ||
|
| |||||
| Chemotherapy (%) | No | 236 (19.7) | 204 (20.7) | 32 (15.0) | 0.07 |
| Yes | 965 (80.3) | 783 (79.3) | 182 (85.0) | ||
|
| |||||
| Bone metastases (%) | No | 1144 (95.3) | 965 (97.8) | 179 (83.6) | <0.001 |
| Yes | 57 (4.7) | 22 (2.2) | 35 (16.4) | ||
|
| |||||
| Category (%) | Multicenter data (validation group) | 107 (8.9) | 87 (8.8) | 20 (9.3) | 0.908 |
| SEER data (training group) | 1094 (91.1) | 900 (91.2) | 194 (90.7) | ||
| Times (mean (SD)) | NA | 30.32 (22.75) | 32.96 (22.96) | 18.13 (17.12) | <0.001 |
Univariate and multivariate logistic regression analysis of risk factors for lung metastasis in patients with osteosarcoma.
| Variables | Univariate OR (95% CI) |
| Multivariate OR (95% CI) |
|
|---|---|---|---|---|
| Age (years) | 1.001 (0.995–1.008) | 0.637 | — | — |
| Race | ||||
| White | Ref | Ref | Ref | Ref |
| Black | 1.115 (0.725–1.716) | 0.620 | — | — |
| Other | 1.079 (0.732–1.590) | 0.700 | — | — |
| Sex | ||||
| Male | Ref | Ref | Ref | Ref |
| Female | 0.628 (0.463–0.853) | <0.05 | 0.586 (0.419–0.819) | <0.05 |
| Primary site | ||||
| Limb bones | Ref | Ref | Ref | Ref |
| Axis of a bone | 0.821 (0.578–1.166) | 0.271 | — | — |
| Other | 0.813 (0.463–1.427) | 0.471 | — | — |
| Grade | ||||
| Well differentiated | Ref | Ref | Ref | Ref |
| Moderately differentiated | 3.611 (0.398–32.770) | 0.254 | — | — |
| Poorly differentiated | 6.390 (0.849–48.065) | 0.072 | — | — |
| Undifferentiated; anaplastic | 5.951 (0.798–44.359) | 0.082 | — | — |
| Unknown | 5.113 (0.677–38.606) | 0.114 | — | — |
| Laterality | ||||
| Left | Ref | Ref | Ref | Ref |
| Right | 1.135 (0.828–1.555) | 0.431 | — | — |
| Other | 0.837 (0.512–1.366) | 0.475 | — | — |
| T | ||||
| T1 | Ref | Ref | Ref | Ref |
| T2 | 2.558 (1.729–3.785) | <0.001 | 2.331 (1.542–3.524) | <0.001 |
| T3 | 6.032 (2.931–12.413) | <0.001 | 4.154 (1.834–9.407) | <0.01 |
| TX | 3.579 (2.235–5.734) | <0.001 | 2.067 (1.205–3.545) | <0.01 |
| N | ||||
| N0 | Ref | Ref | Ref | Ref |
| N1 | 2.609 (1.280–5.314) | <0.01 | 1.315 (0.572–3.023) | 0.519 |
| NX | 2.817 (1.717–4.623) | <0.001 | 2.040 (1.143–3.640) | <0.05 |
| Surgery | ||||
| No | Ref | Ref | Ref | Ref |
| Yes | 0.273 (0.197–0.378) | <0.001 | 0.574 (0.383–0.859) | <0.01 |
| Radiation | ||||
| No | Ref | Ref | Ref | Ref |
| Yes | 1.739 (1.162–2.603) | <0.05 | 1.244 (0.781–1.979) | 0.358 |
| Chemotherapy | ||||
| No | Ref | Ref | Ref | Ref |
| Yes | 1.482 (0.987–2.224) | 0.058 | — | — |
| Bone metastases | ||||
| No | Ref | Ref | Ref | Ref |
| Yes | 8.577 (4.916–14.964) | <0.001 | 4.542 (2.451–8.414) | <0.001 |
Figure 110-fold cross-validation of machine learning algorithms.
Figure 2ROC curves of six ML algorithm models in predicting the risk of lung metastasis in osteosarcoma patients.
Figure 3Relative importance ranking of features in ML algorithms for predicting lung metastasis.
Figure 4The correlation of variables. Yellow indicates positive correlation and purple indicates negative correlation.
Figure 5The web calculator predicting lung metastases in patients with osteosarcoma.