| Literature DB >> 35517582 |
Chakka Kiran Kumar1, Shankar Deval Sathiyashivan2, Dhanraj T Masram2, K V Jovan Jose1, Malaichamy Sathiyendiran1.
Abstract
A series of new symmetrical tripodal molecules 1a-4b with a central benzene scaffold substituted with methyl/ethyl groups and three benzimidazolyl units having a bithiophene/biphenyl/5-alkylthiophene motif at the 2-position via a -CH2- unit were synthesized and characterized by elemental analysis, HR-MS, and NMR spectroscopy. NMR spectral data reveal that all molecules adopt a cyclic benzene trimer (CBT) using three benzimidazolyl units. Intramolecular cooperative edge-to-face C-H⋯π interactions stabilize the CBT motif in solution and are strong in ethyl substituted molecules (1b-4b) compared to methyl substituted (1a-4a) ones. However, the strength of the CBT unit in the tripodal molecule is independent of the length of the substituent at the 2-position of the benzimidazolyl unit. The relative 1H NMR chemical shift calculated at the MPW1PW91/6-311+G(d,p) level of theory corroborates the experimental values, and the calculations predict the distribution of the structures into syn isomers. The relative change in the NMR chemical shift is justified by the relative change in the magnitude of the (3,+3) critical point (CP) in the molecular electrostatic potential (MESP) topography. Also, a linear correlation of the intramolecular C-H⋯π interactions evaluated at M062X/6-311+G(d,p) with the relative NMR chemical shift suggest the latter as a measure of intramolecular cooperativity. This journal is © The Royal Society of Chemistry.Entities:
Year: 2019 PMID: 35517582 PMCID: PMC9059549 DOI: 10.1039/c8ra06647g
Source DB: PubMed Journal: RSC Adv ISSN: 2046-2069 Impact factor: 4.036
Fig. 1Tripodal molecules 1a–4b.
Fig. 2Partial 1H NMR spectra of L1, 1a and 1b in d6-DMSO solvent.
Fig. 3The relative 1H-NMR chemical shift (in ppm) of H4–H7 protons (Mol = 1a–4b and L = L1–L4).
Fig. 4Molecular structures of 1a, 1b, 2a and 2b evaluated at MPW1PW91/6-311+G(d,p) level of theory and basis function showing the cyclic benzene trimer (CBT) between three benzene rings of benzimidazolyl units.
Fragment energies, total energy (Hartrees) and intramolecular energies (kcal mol−1) at M062X [MPW1PW91]/6-311+G(d,p) levels of theory and basis function calculated for 1a, 1b, 2a and 2b, as per the scheme depicted in Fig. S6 in ESI
| Mol |
|
|
|
|
|
|
|---|---|---|---|---|---|---|
| 1a | −3392.63315 | −1871.33900 | −350.04673 | −4913.92920 | −4913.92731 | −1.18[−0.10] |
| 1b | −3510.52082 | −1989.22580 | −467.93282 | −5031.81789 | −5031.81585 | −1.28[−0.12] |
| 2a | −2109.61118 | −1229.82792 | −350.046850 | −2989.39661 | −2989.39443 | −1.37[−0.04] |
| 2b | −2227.49869 | −1347.71468 | −467.93286 | −3107.28491 | −3107.28271 | −1.38[−0.05] |
Experimental and theoretical [MPW1PW91/6-311+G(d,p)] relative 1H chemical shift (in ppm) of 1a, 1b, 2a and 2b with the corresponding ligand (L1–L2) in d6-DMSO solvent
| Mol | H4 | H5 | H6 | H7 | Ha | Hb | Hc | Hd | He |
|---|---|---|---|---|---|---|---|---|---|
| 1a | −0.03 [−0.02] | 0.08 [0.01] | 0.53 [0.79] | 1.22 [1.25] | 0.00 [0.05] | 0.00 [−0.11] | −0.02 [−0.05] | 0.08 [−0.02] | 0.00 [ 0.02] |
| 1b | −0.04 [−0.01] | 0.06 [0.06] | 0.79 [1.04] | 1.29 [1.42] | −0.09 [0.00] | −0.03 [−0.13] | −0.05 [−0.05] | 0.07 [−0.02] | −0.01 [ 0.02] |
| 2a | 0.01 [0.00] | 0.11 [0.39] | 0.55 [0.94] | 1.24 [1.47] | 0.43 [−0.02] | 0.09 [−0.01] | 0.04 [ 0.06] | 0.01 [0.03] | 0.02 [−0.04] |
| 2b | −0.02 [0.00] | 0.09 [0.07] | 0.73 [1.16] | 1.26 [1.53] | 0.38 [0.20] | 0.06 [−0.09] | 0.02 [−0.06] | 0.00 [0.05] | −0.01 [−0.04] |
Fig. 5MESP topography distribution of 1a, 1b, 2a and 2b evaluated at MPW1PW91/6-311+G(d,p) level of theory and basis set. The consecutive contours are separated by 0.02 a.u.