| Literature DB >> 35511314 |
Bengisu Akbil1,2, Tim Meyer3, Paula Stubbemann4, Charlotte Thibeault4, Florian Kurth5,6, Horst von Bernuth7,8,9,10, Christian Meisel11,12, Christine Goffinet13,14, Olga Staudacher3,15, Daniela Niemeyer1,16, Jenny Jansen1,2, Barbara Mühlemann1,16, Jan Doehn4, Christoph Tabeling2,4, Christian Nusshag17, Cédric Hirzel18, David Sökler Sanchez19,20, Alexandra Nieters21, Achim Lother22, Daniel Duerschmied22, Nils Schallner23,24, Jan Nikolaus Lieberum23,24, Dietrich August25, Siegbert Rieg25, Valeria Falcone26, Hartmut Hengel26, Uwe Kölsch3, Nadine Unterwalder3, Ralf-Harto Hübner2,4, Terry C Jones1,16,27, Norbert Suttorp4, Christian Drosten1,16, Klaus Warnatz19,20, Thibaud Spinetti28, Joerg C Schefold28, Thomas Dörner29,30, Leif Erik Sander4, Victor M Corman1,16,31, Uta Merle32.
Abstract
PURPOSE: Six to 19% of critically ill COVID-19 patients display circulating auto-antibodies against type I interferons (IFN-AABs). Here, we establish a clinically applicable strategy for early identification of IFN-AAB-positive patients for potential subsequent clinical interventions.Entities:
Keywords: Autoantibodies; COVID-19; SARS-CoV-2; Type I interferon
Mesh:
Substances:
Year: 2022 PMID: 35511314 PMCID: PMC9069123 DOI: 10.1007/s10875-022-01252-2
Source DB: PubMed Journal: J Clin Immunol ISSN: 0271-9142 Impact factor: 8.542
Baseline patient characteristics
| Individual cohorts | All patients of cross-sectional cohort | ||||||
|---|---|---|---|---|---|---|---|
| Center A, Berlin cohort | Center B, Bern cohort | Center C, Freiburg cohort | Center D, Heidelberg cohort (TPEC) | IFN-AAB Neutralizing | IFN-AAB Non-neutralizing | ||
| 266 | 50 | 87 | 27 | 13 | 390 | / | |
| 2.6 (7/266) | 6.0 (3/50) | .5 (3/87) | 18.5 (5/27) | 100 (13/13) | / | / | |
| Neutralizing IFN-alpha | 2.6 (7/266) | 6.0 (3/50) | 3.5 (3/87) | 18.5 (5/27) | 100 (13/13) | ||
| Neutralizing IFN-omega | 1.1 (3/266) | 6.0 (3/50) | 2.3 (2/87) | 11.1 (3/27) | 61.5 (8/13) | ||
| 61 (50–71), 266 | 67.3 (56.8–74.5), 50 | 59 (53–67), 87 | 65 (56–72), 27 | 69.4 (52.5–75.6), 13 | 61.0 (52–70.2), 390 | 0.19 | |
| Male: | |||||||
| Female | 27.8 (74/266) | 18.0 (9/50) | 33.3 (29/87) | 25.9 (7/27) | 15.4 (2/13) | 28.2 (110/390) | 0.31 |
| Male | 72.2 (193/266) | 82.0 (41/50) | 66.7 (58/87) | 74.1 (20/27) | 84.6 (11/13) | 71.8 (280/390) | OR = 2.16 (0.47–9.91) |
| 28.4 (24,9–32,5), 245 | 27 (26–31), 47 | 27.7 (25.2–32.2), 56 | 31.5 (25.8–40.1), 27 | 27.4 (25.5–29.5), 10 | 28 (24.9–32.4), 338 | 0.73 | |
| CCI (Median, IQR, available n) | 2 (1–3.75), 265 | 4 (2–6.5), 33 | 3 (2–5), 83 | 4 (3–5), 27 | 3 (1.5–4), 13 | 3 (1–4), 367 | 0.54 |
| Chronic heart disease (%) | 58.9 (155/263) | 30.3 (10/33) | 23.0 (20/87) | 77.8 (21/27) | 46.2 (6/13) | 48.4 (179/370) | 0.74, OR = 0.83 (0.27–2.53) |
| Chronic pulmonary disease (%) | 18.5 (47/254) | 27.3 (9/33) | 10.4 (9/87) | 3.7 (1/27) | 23.1 (3/13) | 17.2 (62/361) | 0.58, OR = 1.45 (0.39–5.41) |
| Diabetes (%) | 26.7 (70/262) | 42.4 (14/33) | 26.4 (23/87) | 44.4 (12/27) | 23.1 (3/13) | 28.2 (104/369) | 0.54, OR = 0.70 (0.19–2.58) |
| Obesity (%) | 39.2 (96/245) | 31.9 (15/47) | 28.6 (16/56) | 55.6 (15/27) | 20.0 (2/10) | 37.0 (125/338) | 0.27, OR = 0.43 (0.08–2.04) |
| Autoimmune disease (%) | 2.8 (7/251) | 2.0 (1/50) | 5.7 (5/87) | 3.7 (1/27) | 0 (0/13) | 3.5 (13/375) | 0.72 |
| 57.0 (151/265) | 80.0 (40/50) | 77.5 (55/71) | 85.2 (23/27) | 100 (12/12) | 62.6 (234/374) | 0.0079 | |
| 6 (2–9), 233 | 4 (2–8), 50 | 6 (3–9), 66 | 6 (3–8), 27 | 4 (3–8), 11 | 5 (2–9), 338 | 0.81 | |
| 78.4 (189/241) | 74.0 (37/50) | 72 (36/50) | 100 (12/12) | 100 (12/12) | 76.0 (250/329) | 0.0528 | |
| 46.2 (117/253) | 60,0 (30/50) | 39,0 (32/82) | 100 (27/27) | 100 (13/13) | 44.5 (166/372) | 0.0001 | |
| 32,5 (18,25–56,5), 116 | 10,5 (5–18,5), 30 | 16 (6–21), 23 | 24 (14–37), 27 | 20 (10.75–29.25), 12 | 24 (11–47,5), 157 | 0.40 | |
| 20 (10–44), 262 | 13,5 (5–23,25), 50 | 16 (7–33), 85 | 41 (24–63), 27 | 25 (16–47), 13 | 17 (9–37,8), 384 | 0.045 | |
| Dexamethasone | 46.9 (123/262) | 48.0 (24/50) | 21.0 (17/87) | 74,1 (20/27) | 46.2 (6/13) | 41.6 (158/380) | 0.74 |
| Remdesivir | 9,2 (16/174) | 0 (0/50) | 12.6 (11/87) | 29.6 (8/27) | 0 (0/13) | 9.0 (27/300) | 0.52 |
| 29.3 (74/253) | 26.0 (13/50) | 25.3 (20/79) | 77.8 (21/27) | 69.2 (9/13) | 26.6 (98/369) | 0.0008 | |
| 17.4 (44/253) | 0 (0/50) | 24.4 (20/82) | 3.7 (1/27) | 46.2 (6/13) | 15.6 (58/372) | 0.0036 | |
| 0 (0/266) | 0 (0/50) | 0 (0/87) | 100 (27/27) | 0 (0/13) | 0 (0/390) | / | |
| 5 (4–7), 266 | 7 (4–8), 50 | 6 (4–8), 83 | 7 (7–8), 27 | 8 (8–8), 13 | 6 (4–7), 386 | 0.0001 | |
| Discharged or transferred | 81.0 (205/253) | 72.0 (36/50) | 72.0 (59/82) | 51.8 (14/27) | 7.7 (1/13) | 80.4 (299/372) | |
| Deceased | 19.0 (48/253) | 28.0 (14/50) | 25.6 (21/82) | 48.2 (13/27) | 92.3 (12/13) | 19.1 (71/372) | 0.0001 |
| Unknown | / | / | 2.4 (2/82) | / | / | 0.5 (2/372) | |
Data are shown in % (N/n) unless otherwise indicated. IMV invasive mechanical ventilation, IQR interquartile range, CCI Charlson’s comorbidity index. Patients with DNI/DNR were excluded for IMV, RRT, ECMO, and Outcome (N = 13 Center A, N = 0 Center B, N = 5 Center C, and N = 0 Center D)
Fig. 1Prevalence of AABs against IFN-α2 and IFN-ω in patients with COVID-19. a ECLIA-based assay for detection of IgG AABs against IFN-α2 and IFN-ω in sera from hospitalized patients with COVID-19 from four different university hospital cohorts (Center A, n = 266; Center B, n = 50; Center C, n = 87; Center D, n = 27), in patients with APS-1 (n = 6), and healthy health care workers (HC) without documented SARS-CoV-2 infection (n = 667). Dotted lines indicate the 97.5th percentile of the ECLIA assay LSC in sera from the HC cohort. Dots indicate samples containing AABs scoring specific (red) or unspecific (blue) for IFN-α2 and IFN-ω binding in the competition assay (see b), respectively. Samples depicted as black dots were not tested in the competition assay. The prevalence of sera with specifically binding type I IFN-AABs in each cohort is given in percent. b Specificity of the ECLIA assay signal for IFN-α2- and IFN-ω-AABs was tested in an competition assay by preincubation of sera with increasing concentrations of unlabeled IFN-α2 and IFN-ω protein (0–2.5 µg/ml) before analysis. Samples showing a decrease in assay signal by at least 75% in the presence of the highest competitor concentration were defined as specific for type I IFN antibody reactivity and are indicated with red lines (IFN-α2 n = 20, IFN-ω n = 12). Samples showing no decrease in the presence of excess unlabeled type I IFN protein were regarded as unspecific for type I IFN antibody reactivity and are indicated with blue lines (IFN-α2 n = 62, IFN-ω n = 39)
Fig. 2IFN-AABs neutralize exogenous IFN in a virus infection-based assay. a, b Selected sera were analyzed for IFN neutralization activity in a SARS-CoV-2 infection-based assay. The ability of individual sera to neutralize exogenous IFN-α2 (a) and IFN-ω (b) is shown by the rescue of susceptibility to infection as judged by quantification of viral RNA (x-axis) and infectivity (y-axis) in the supernatant. The infection condition in the absence of serum and IFN is set to 1. c, d The LSC value for individual sera, grouped into non-neutralizing and neutralizing sera, for the four COVID-19 cohorts. Dots indicate sera containing AABs scoring specific (red) or unspecific (blue) for IFN-α2 and IFN-ω binding in the competition assay (see b), respectively. Black dots indicate samples that scored below the threshold of the ELISA. Black dotted lines indicate the 97.5th percentile of the ECLIA assay LSC in sera from the healthy health care workers (HC) cohort (see Fig. 1). Neutralization ability of IFN-α and IFN-ω can be predicted at 100% for sera displaying LSCs above the respective red dotted lines (IFN-α: 35,639; IFN-ω: 12,603)
Fig. 3Laboratory parameters of COVID-19 patients displaying type I IFN-AABs. Values of C-reactive protein (CRP), procalcitonin, ferritin, lactate dehydrogenase (LDH), absolute leukocyte and neutrophil count, and neutrophil-to-lymphocyte ratio (NLR) of patients with (N = 5–6) and without neutralizing IFN-AABs (N = 200–265) from the cross-sectional cohort (CSC, all WHO scores). For each patient, the first available parameter within 72 h of hospital admission is shown. Statistical testing was performed with Mann–Whitney U test
Fig. 4In IFN-AAB-positive patients, high quantities of neutralizing IFN-α2-AABs were present both soon post-symptom onset and at the peak of disease. a Time course of antibody quantities in patient sera that scored IFN-AAB-positive at the peak of disease (N = 8, red lines). Additionally, time course of antibody quantities in patient sera that scored IFN-AAB-negative of the peak of disease is plotted (N = 15, black lines). The dotted line indicates the 97.5th percentile of the ECLIA assay LSC in sera from the HC cohort (see Fig. 1). b, c The ability of the sera to neutralize exogenous IFN-α2 is shown by the rescue of susceptibility to infection as judged by quantification of viral RNA (b) and infectivity (c) in the supernatant. The infection condition in the absence of serum and IFN is set to 1
Fig. 5Clinical outcome of COVID-19 patients with neutralizing IFN-AABs. a Median max. WHO score in hospital. Statistical testing was performed using the Mann–Whitney U test. b Proportion of patients requiring invasive mechanical ventilation (IMV) after hospital admission. Statistical testing was performed using the chi-square test. c Probability of survival of patients with and without neutralizing IFN-AABs from the cross-sectional cohort (CSC) from symptom onset until discharge (up to 150 days), death or transferral (p < 0.0001). Statistical testing was performed using a log-rank test. Neutralizing (N = 13), non-neutralizing (panels a and b: N = 372, panel c: N=369)
Fig. 6Inter-individual effect of therapeutic plasma exchange on IFN-AABs and SARS-CoV-2 antibodies. a Probability of survival of neutralizing IFN-AAB-positive and -negative patients with critical COVID-19 (max. WHO score 6–8) with and without plasma exchange (CSC and TPEC) from symptom onset until discharge, death or transferral (p = 0.04, neutralizing CSC versus neutralizing TPEC; p < 0.0001, neutralizing CSC versus non-neutralizing CSC). Statistical testing was performed using a log-rank test. Neutralizing CSC (N = 13), non-neutralizing CSC (N = 184), neutralizing TEPC (N = 5), and non-neutralizing TPEC (N = 22). b Antibody profile in serum from individual COVID-19 patients of the TPEC subjected to plasma exchange. The quantity of IFN-α2- and IFN-ω-AABs, SARS-CoV-2-IgG and -IgA, and the IFN-α2 and IFN-ω neutralization status are given for various time points. The patient identifier is given in red. Viral load profiles were only available for patients D011 and D018 and are shown in Supplementary Fig. 7
Fig. 7Proposed diagnostic algorithm for rapid identification of neutralizing IFN-AAB-positive patients. The number needed to screen (NNS) is based on results from the cross-sectional cohort (CSC). ELISA for IFN-AAB detection was considered to be positive if it exceeded the 97.5th percentile of the healthy control cohort. (1) NNS of all hospitalized COVID-19 patients without preselection was 31.0 (403 patients in total, 13 patients with neutralizing IFN-AABs). (2) Prescreening of patients using the clinical criteria of fever at admission and need for supplemental oxygen within the first 72 h after hospitalization diminished the NNS in the IFN-AAB ELISA (3) by half, to 15.6 (172/11). For patients identified as positive in the screening ELISA, the NNS in the competition assay to confirm the presence of IFN-specific AABs is reduced to 1.4 (15/11) (4). For patients with high-titer IFN-AABs (light signal count > 35.639), the competition assay can be omitted. Patients highly positive in the IFN-AAB ELISA and those with specific results in the competition assay may be included in clinical studies that aim testing specific therapies, including therapeutic plasma exchange (5). Figure created with BioRender.com