| Literature DB >> 35496986 |
Alaa Emara Rabee1, Khalid Z Kewan1, Hassan M El Shaer1, Mebarek Lamara2, Ebrahim A Sabra3.
Abstract
Rumen methanogens prevent the accumulation of fermentation gases in the rumen and generate methane that increases global warming and represents a loss in animals' gross energy. Non-traditional feed resources such as the by-products of date palm (Phoenix dactylifera) and olive (Olea europaea) trees have received attention to be used in animal feeding. This study evaluated the impact of non-traditional feed resources including olive cake (OC), discarded dates (DD), and date palm frond (DPF) in sheep diet on rumen fermentation, diversity and relative abundance of rumen methanogens. Nine adult rams were assigned to three equal groups and fed three diets: traditional concentrates mixture (S1); non-traditional concentrate mixture (S2) based on DD and OC; and (S3) composed of the same S2 concentrate supplemented with DPF as a roughage part. The results showed that rumen pH was higher with S3 diet than the other two diets. However, the S1 diet showed the highest values of total volatile fatty acids (TVFA) and rumen ammonia. In addition, the proportions of acetic and butyric acids were increased, whereas propionic acid declined in S2 and S3 compared to the S1 diet. Rumen methanogens were dominated by Methanobrevibacter that showed a numeric decline by including DD, OC, and DPF in the animal diets. Principal component analysis (PCA) based on rumen fermentation parameters and relative abundances of methanogens genera showed three distinct clusters. Also, positive and negative correlations were revealed between methanogens genera and rumen metabolites. This study expands the knowledge regarding the effect of agricultural byproducts on rumen fermentation and the methanogenic community.Entities:
Keywords: discarded dates, date palm fronds; illumina Mi Seq; methanogenic archaea; olive cake; sheep rumen
Year: 2022 PMID: 35496986 PMCID: PMC8995188 DOI: 10.3934/microbiol.2022003
Source DB: PubMed Journal: AIMS Microbiol ISSN: 2471-1888
Rumen fermentation parameters, rumen enzymes activities, and methanogens population (Log10 copies/µL 16S rDNA) in the rumen of sheep fed different diets (Mean ± SE).
| Item | S1 | S2 | S3 | Overall Mean | SEM | P value | |||
| Mean | SE | Mean | SE | Mean | SE | ||||
| Rumen fermentation parameters | |||||||||
| pH | 5a | 0.05 | 5.2a | 0.04 | 5.91b | 0.12 | 5.35 | 0.14 | <0.0001 |
| NH3N, mg/dL | 6.6b | 0.04 | 3a | 0.05 | 3a | 0.06 | 4.2 | 0.6 | <0.0001 |
| TVFA, meq/dL | 13.1b | 0.4 | 8.8a | 0.24 | 8.75a | 0.08 | 10.2 | 0.73 | <0.0001 |
| Acetic% | 51.3a | 0.3 | 54.3a | 1.2 | 66.7b | 2.3 | 57.4 | 2.5 | 0.001 |
| Propionic% | 41c | 0 | 35b | 2.5 | 20a | 0.6 | 32 | 3.2 | <0.0001 |
| Butyric% | 7.7 | 0.3 | 10.7 | 1.8 | 13.3 | 1.7 | 10.5 | 1.09 | 0.086 |
| A/P ratio | 1.25 | 1.55 | 3.3 | ||||||
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| Enzymes activity, IU/mL | |||||||||
| Cellulase | 7.7 | 1.3 | 10.5 | 0.86 | 9 | 0 | 9.06 | 0.6 | 0.168 |
| xylanase | 6.5 | 1.75 | 6 | 2.8 | 3.2 | 2.2 | 5.2 | 1.25 | 0.567 |
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| Archaeal copy number; Log 10 copies/µL 16S rDNA | |||||||||
| Log10 | 5.8 | 0.148 | 5.2 | 0.6 | 6.2 | 0.6 | 5.7 | 0.28 | 0.415 |
*Note: A: Acetic; P: Propionic.
Gas yield and methane production of experimental diets under investigation.
| Item | S1 | S2 | S3 | Overall Mean | SEM | P value | |||
| Mean | SE | Mean | SE | Mean | SE | ||||
| Total gas yield, mlL0.2 g DM | 20 | 0.32 | 17 | 0.53 | 18.4 | 1.03 | 18.5 | 0.55 | 0.06 |
| Methane, mL/0.2 g DM | 4.05a | 0.04 | 4.50a | 0.2 | 6.75b | 0.16 | 5.09 | 0.42 | <0.0001 |
| Methane/TG, % | 20.27a | 0.37 | 26.49b | 0.35 | 36.73c | 0.55 | 27.83 | 2.4 | <0.0001 |
| CH4 energy, MJ/d | 1.91a | 0.05 | 2.50b | 0.05 | 2.83c | 0.06 | 2.4 | 0.13 | <0.0001 |
| CH4 energy/GEI, % | 10.32a | 0.26 | 12.51b | 0.28 | 16.03c | 0.54 | 12.95 | 0.85 | <0.0001 |
Number of ASVs and alpha diversity indices of methanogenic community in the rumen of sheep under different diets (Mean ± SE).
| Index | S1 | S2 | S3 | Overall Mean | SEM | P value | |||
| Mean | SE | Mean | SE | Mean | SE | ||||
| AVSs | 65 | 10.7 | 46 | 7.8 | 65 | 14.3 | 58.5 | 6.4 | 0.461 |
| Chao1 | 65 | 10.5 | 46 | 7.8 | 65 | 14.3 | 58.7 | 6.4 | 0.453 |
| Shannon | 2.5 | 0.2 | 2.07 | 0.4 | 2.5 | 0.56 | 2.4 | 0.2 | 0.650 |
| InvSimpson | 8 | 1.7 | 5.3 | 2.1 | 8.9 | 4.4 | 7.4 | 1.6 | 0.687 |
Figure 1.Principal coordinates analysis (PCoA) of archaeal community in the rumen of Barki sheep. PCoA was carried out between three sheep groups fed different diets: black circles for S1 group, red triangles for S2 group, and green squares for S3 group.
The relative abundance (%) of methanogenic genera in the rumen of sheep fed different diets (Mean ± SE).
| Genera | S1 | S2 | S3 | Overall Mean | SEM | P value | |||
| Mean | SE | Mean | SE | Mean | SE | ||||
|
| 92.2 | 0.62 | 89 | 3.26 | 83.4 | 2.44 | 88.2 | 1.7 | 0.096 |
|
| 4 | 0.32 | 5.8 | 1.7 | 8.7 | 1.1 | 6.2 | 0.9 | 0.075 |
|
| 3.8 | 0.3 | 5.2 | 1.56 | 7.9 | 1.3 | 5.6 | 0.8 | 0.127 |
Figure 2.The relative abundances of methanogenic genera in the rumen of three sheep groups fed different diets (S1, S2 and S3).
Figure 3.Principal component analysis (PCA) based on the relative abundances of rumen methanogens and rumen fermentation parameters in the rumen of three sheep groups fed different diets; black circles S1 group, red squares for S2 group, and blue triangle S3 group.
Figure 4.Heatmap based on Pearson correlation coefficients between the relative abundances of rumen methanogens genera, rumen fermentation parameters, and rumen enzymes. The black boxed ellipses refer to the significant correlations at P < 0.05.