| Literature DB >> 35484204 |
Guanlin Xiao1, Zhihao Zeng2, Jieyi Jiang1, Aili Xu1, Sumei Li1, Yangxue Li1, Zhao Chen1, Weitao Chen1, Jingnian Zhang1, Xiaoli Bi3,4.
Abstract
Bushao Tiaozhi Capsule (BSTZC) is a novel drug in China that is used in clinical practice and has significant therapeutic effects on hyperlipidemia (HLP). In our previous study, BSTZC has a good regulatory effect on lipid metabolism of HLP rats. However, its bioactive compounds, potential targets, and underlying mechanism remain largely unclear. We extracted the active ingredients and targets in BSTZC from the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP) and literature mining. Subsequently, core ingredients, potential targets, and signaling pathways were determined through bioinformatics analysis, including constructed Drug-Ingredient-Gene symbols-Disease (D-I-G-D), protein-protein interaction (PPI), the Gene Ontology (GO), and the Kyoto Encyclopedia of Genes and Genomes (KEGG). Finally, the reliability of the core targets was evaluated using in vivo studies. A total of 36 bioactive ingredients and 209 gene targets were identified in BSTZC. The network analysis revealed that quercetin, kaempferol, wogonin, isorhamnetin, baicalein and luteolin may be the core ingredients. The 26 core targets of BSTZC, including IL-6, TNF, VEGFA, and CASP3, were considered potential therapeutic targets. Furthermore, GO and KEGG analyses indicated that the treatment of HLP by BSTZC might be related to lipopolysaccharide, oxidative stress, inflammatory response and cell proliferation, differentiation and apoptosis. The pathway analysis showed enrichment for different pathways like MAPK signaling pathway, AGE-RAGE signaling pathway in diabetic, IL-17 signaling pathway and TNF signaling pathway. In this study, network pharmacology analysis, and experiment verification were combined, and revealed that BSTZC may regulate key inflammatory markers and apoptosis for ameliorating HLP.Entities:
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Year: 2022 PMID: 35484204 PMCID: PMC9051129 DOI: 10.1038/s41598-022-11139-2
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.996
Figure 1Workflow diagram of the network pharmacology-based analysis of BSTZC in the treatment of HLP.
The primer sequences for mRNA in RT-qPCR.
| Primer | Sequences |
|---|---|
Sense: GAAATGCCACCTTTTGACAGTG Anti-sense: | |
Sense: CTGACTGGAAAGCCGAAA Anti-sense: AAAGGGACTGGATGAACC | |
Sense: ATCTCACCAATGACCGCTAT Anti-sense: CTGCTGCCAGTCTTCAACAC | |
Sense: Anti-sense: | |
Sense: Anti-sense: |
Figure 2Venn diagram of related targets of BSTZC and HLP.
Figure 3The Drug-Ingredients-Gene symbols-Disease (D-I-G-D) network of BSTZC.
Figure 4Chemical structures of the 6 core active ingredients.
Figure 5 PPI network compound targets against HLP. The original PPI data generated from the STRING database showing the detailed interactions of the targets.
Figure 6The whole screening process for the PPI network through a topological method. In the third image, the bigger size and brighter color represent higher DC value.
The information of 26 core targets.
| No | Description | Gene symbol | Degree | Uniprot ID |
|---|---|---|---|---|
| 1 | RAC-alpha serine/threonine-protein kinase | AKT1 | 102 | 207 |
| 2 | Interleukin-6 | IL6 | 98 | 3569 |
| 3 | Cellular tumor antigen p53 | TP53 | 98 | 7157 |
| 4 | Tumor necrosis factor | TNF | 93 | 7124 |
| 5 | Vascular endothelial growth factor A | VEGFA | 92 | 7422 |
| 6 | Transcription factor AP-1 | JUN | 92 | 3725 |
| 7 | Myc proto-oncogene protein | MYC | 88 | 4609 |
| 8 | Caspase-3 | CASP3 | 88 | 836 |
| 9 | Mitogen-activated protein kinase 1 | MAPK1 | 86 | 5594 |
| 10 | Mitogen-activated protein kinase 8 | MAPK8 | 84 | 5599 |
| 11 | Pro-epidermal growth factor | EGF | 83 | 1950 |
| 12 | Prostaglandin G/H synthase 2 | PTGS2 | 83 | 5743 |
| 13 | Epidermal growth factor receptor | EGFR | 82 | 1956 |
| 14 | Matrix metalloproteinase-9 | MMP9 | 80 | 4318 |
| 15 | Estrogen receptor | ESR1 | 79 | 2099 |
| 16 | Interleukin-8 | CXCL8 | 76 | 3576 |
| 17 | G1/S-specific cyclin-D1 | CCND1 | 76 | 595 |
| 18 | Catalase | CAT | 74 | 847 |
| 19 | Interleukin-1 beta | IL-1β | 74 | 3553 |
| 20 | Fibronectin | FN1 | 73 | 2335 |
| 21 | Proto-oncogene c-Fos | FOS | 72 | 2353 |
| 22 | Interleukin-10 | IL10 | 66 | 3586 |
| 23 | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN | PTEN | 66 | 5728 |
| 24 | Cytochrome c | CYCS | 65 | 54205 |
| 25 | Peroxisome proliferator-activated receptor gamma | PPARG | 63 | 5468 |
| 26 | Transcription factor p65 | RELA | 62 | 5970 |
Figure 7(A) Bubble chart of gene ontology (GO) function enrichment of core targets. (B) Bubble chart of Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment of core targets.
Top 20 clusters with their representative enriched terms.
| Catagory | Description | LogP | Count | Gene |
|---|---|---|---|---|
| hsa05167 | Kaposi sarcoma-associated herpesvirus infection | −17.90 | 15 | AKT1, IL6, TP53, VEGFA, JUN, MYC, CASP3, MAPK1, MAPK8, PTGS2, CXCL8, CCND1, FOS, CYCS, RELA |
| hsa05163 | Human cytomegalovirus infection | −16.74 | 15 | AKT1, IL6, TP53, TNF, VEGFA, MYC, CASP3, MAPK1, PTGS2, EGFR, CXCL8, CCND1, IL-1β, CYCS, RELA |
| hsa05161 | Hepatitis B | −17.11 | 14 | AKT1, IL6, TP53, TNF, JUN, MYC, CASP3, MAPK1, MAPK8, MMP9, CXCL8, FOS, CYCS, RELA |
| hsa04010 | MAPK signaling pathway | −13.45 | 14 | AKT1, TP53, TNF, VEGFA, JUN, MYC, CASP3, MAPK1, MAPK8, EGF, EGFR, IL-1β, FOS, RELA |
| hsa04933 | AGE-RAGE signaling pathway in diabetic complications | −18.17 | 13 | AKT1, IL6, TNF, VEGFA, JUN, CASP3, MAPK1, MAPK8, CXCL8, CCND1, IL-1β, FN1, RELA |
| hsa05132 | Salmonella infection | −13.78 | 13 | AKT1, IL6, TNF, JUN, MYC, CASP3, MAPK1, MAPK8, CXCL8, IL-1β, FOS, CYCS, RELA |
| hsa05210 | Colorectal cancer | −17.07 | 12 | AKT1, TP53, JUN, MYC, CASP3, MAPK1, MAPK8, EGF, EGFR, CCND1, FOS, CYCS |
| hsa04657 | IL-17 signaling pathway | −16.58 | 12 | IL6, TNF, JUN, CASP3, MAPK1, MAPK8, PTGS2, MMP9, CXCL8, IL-1β, FOS, RELA |
| hsa04668 | TNF signaling pathway | −15.63 | 12 | AKT1, IL6, TNF, JUN, CASP3, MAPK1, MAPK8, PTGS2, MMP9, IL1B, FOS, RELA |
| hsa05135 | Yersinia infection | −14.83 | 12 | AKT1, IL6, TNF, JUN, MAPK1, MAPK8, CXCL8, IL-1β, FN1, FOS, IL10, RELA |
| hsa05205 | Proteoglycans in cancer | −12.42 | 12 | AKT1, TP53, TNF, VEGFA, MYC, CASP3, MAPK1, EGFR, MMP9, ESR1, CCND1, FN1 |
| hsa05133 | Pertussis | −15.77 | 11 | IL6, TNF, JUN, CASP3, MAPK1, MAPK8, CXCL8, IL-1β, FOS, IL10, RELA |
| hsa05142 | Chagas disease | −14.29 | 11 | AKT1, IL6, TNF, JUN, MAPK1, MAPK8, CXCL8, IL-1β, FOS, IL10, RELA |
| hsa05162 | Measles | −12.78 | 11 | AKT1, IL6, TP53, JUN, CASP3, MAPK8, CCND1, IL-1β, FOS, CYCS, RELA |
| hsa05224 | Breast cancer | −12.51 | 11 | AKT1, TP53, JUN, MYC, MAPK1, EGF, EGFR, ESR1, CCND1, FOS, PTEN |
| hsa05222 | Small cell lung cancer | −12.98 | 10 | AKT1, TP53, MYC, CASP3, PTGS2, CCND1, FN1, PTEN, CYCS, RELA |
| hsa01522 | Endocrine resistance | −12.70 | 10 | AKT1, TP53, JUN, MAPK1, MAPK8, EGFR, MMP9, ESR1, CCND1, FOS |
| hsa04620 | Toll-like receptor signaling pathway | −12.43 | 10 | AKT1, IL6, TNF, JUN, MAPK1, MAPK8, CXCL8, IL-1β, FOS, RELA |
| hsa04625 | C-type lectin receptor signaling pathway | −12.43 | 10 | AKT1, IL6, TNF, JUN, MAPK1, MAPK8, PTGS2, IL-1β, IL10, RELA |
| hsa05219 | Bladder cancer | −14.58 | 9 | TP53, VEGFA, MYC, MAPK1, EGF, EGFR, MMP9, CXCL8, CCND1 |
Figure 8The targets-pathway network of BSTZC for treating HLP.
Figure 9Effect of BSTZC on serum and liver in triton-1339W-induced HLP mice. (A) Biochemical analyses of serum TC, TG, HDL-C and LDL-C. (B) The expression of IL-6, VEGFA, caspase-3 and IL-1β mRNA level. The results are expressed as mean ± standard deviation. (n = 6). #P < 0.05, ##P < 0.01 vs control group; *P < 0.05, **P < 0.01 vs model group.