| Literature DB >> 35453406 |
Islam A Berdaweel1, Alexander A Hart2, Andrew J Jatis1, Nathan Karlan1, Shahab A Akhter3, Marie E Gaine1, Ryan M Smith1, Ethan J Anderson1,4.
Abstract
Heterogeneity in the incidence of postoperative atrial fibrillation (POAF) following heart surgery implies that underlying genetic and/or physiological factors impart a higher risk of this complication to certain patients. Glutathione peroxidase-4 (GPx4) is a vital selenoenzyme responsible for neutralizing lipid peroxides, mediators of oxidative stress known to contribute to postoperative arrhythmogenesis. Here, we sought to determine whether GPX4 single nucleotide variants are associated with POAF, and whether any of these variants are linked with altered GPX4 enzyme content or activity in myocardial tissue. Sequencing analysis was performed across the GPX4 coding region within chromosome 19 from a cohort of patients (N = 189) undergoing elective coronary artery bypass graft (-/+ valve) surgery. GPx4 enzyme content and activity were also analyzed in matching samples of atrial myocardium from these patients. Incidence of POAF was 25% in this cohort. Five GPX4 variants were associated with POAF risk (permutated p ≤ 0.05), and eight variants associated with altered myocardial GPx4 content and activity (p < 0.05). One of these variants (rs713041) is a well-known modifier of cardiovascular disease risk. Collectively, these findings suggest GPX4 variants are potential risk modifiers and/or predictors of POAF. Moreover, they illustrate a genotype-phenotype link with this selenoenzyme, which will inform future mechanistic studies.Entities:
Keywords: biomarkers; glutathione peroxidase-4; postoperative atrial fibrillation; reactive oxygen species; single nucleotide variants
Year: 2022 PMID: 35453406 PMCID: PMC9026099 DOI: 10.3390/antiox11040721
Source DB: PubMed Journal: Antioxidants (Basel) ISSN: 2076-3921
Figure 1Overall study flow and design. Right atrial appendage samples were collected intra-operatively from patients undergoing non-emergent CABG. Salt ethanol method was used extract DNA from these samples. The genomic region encoding GPX4 was sequenced using Ion AmpliSeq (ThermoFisher) according to methods described in Methods section. GPx4 enzyme content and activity were measured as described in the Methods section. CABG: coronary artery bypass graft.
Patient clinical and demographic characteristics.
| Variables | POAF | Sinus Rhythm | |
|---|---|---|---|
|
| 47 (25) | 142 (75) | |
|
| |||
|
| 33 (70.21) | 76 (53.52) | 0.0447 |
|
| 42 (89.36) | 113 (79.58) | 0.1301 |
|
| 21 (44.68) | 60 (42.25) | 0.7707 |
|
| 37 (78.72) | 111 (78.17) | 0.9363 |
|
| 12 (25.53) | 40 (28.17) | 0.7257 |
|
| |||
|
| 17 (36.17) | 9 (6.34) | <0.0001 |
|
| 5 (10.64) | 14 (9.86) | 0.8776 |
|
| 28 (59.57) | 63 (44.37) | 0.0705 |
|
| 15 (31.91) | 21 (14.79) | 0.0095 |
|
| 41 (87.23) | 119 (83.80) | 0.5716 |
|
| 19 (40.43) | 52 (36.62) | 0.6405 |
|
| |||
|
| 21 (44.68) | 56 (39.44) | 0.5259 |
|
| 40 (85.11) | 109 (76.76) | 0.2247 |
|
| 10 (21.28) | 32 (22.54) | 0.8572 |
|
| 24 (51.06) | 59 (41.55) | 0.2546 |
|
| 25 (53.19) | 59 (41.55) | 0.1638 |
|
| 28 (59.57) | 92 (64.79) | 0.5198 |
|
| 36 (76.60) | 118 (83.10) | 0.3198 |
|
| |||
|
| 35 (74.47) | 127 (90.07) | 0.0073 |
|
| 19 (40.43) | 69 (48.59) | 0.3306 |
|
| 2 (4.26) | 2 (1.41) | 0.2442 |
|
|
| ||
|
| 129.7 ± 154.4 | 113.5 ± 134.7 | 0.5405 |
|
| 2293.2 ± 1119.4 | 2507.5 ± 1542.3 | 0.3165 |
Sample size N = 189 patients; (POAF N = 47, sinus rhythm N = 142). a Missing N = 56, 41, 8 for LAD, GPx4 activity and GPx4 protein level, respectively. AF, atrial fibrillation; COPD, chronic obstructive pulmonary disease; DM, diabetes mellitus; HF, heart failure; HTN, hypertension; MI, myocardial infarction; ACEi, angiotensin converting enzyme inhibitors; ARB, angiotensin receptor blocker; CCB, calcium channel blocker; EF, ejection fraction; HR, heart rate; LAD, left atrial diameter.
GPX4 variants associated with POAF risk.
| SNP | Minor Allele | Consequence | OR a | Permutated | Number of Permutations | FDR_BH c | FDR_BY d | |
|---|---|---|---|---|---|---|---|---|
|
| T | Regulatory region | 1.869 | 0.0206 | 0.0199 | 1006 | 0.0965 | 0.3137 |
|
| C | Intron variant | 1.737 | 0.0546 | 0.0531 | 376 | 0.1531 | 0.4978 |
|
| T | TF binding site e | 0.5028 | 0.0393 | 0.0465 | 429 | 0.1377 | 0.4478 |
|
| T | Intron variant | 0.3317 | 0.0049 | 0.0037 | 5721 | 0.0339 | 0.1103 |
|
| T | Intron variant | 0.3169 | 0.0035 | 0.0024 | 8716 | 0.0339 | 0.1103 |
a Odds Ratio (OR). b p-value < 0.05. c False discovery rate_Benjamini–Hochberg procedure (FDR_BH). d False discovery rate_Benjamini–Yekutieli procedure (FDR¬_BY). e Transcription Factor (TF).
Figure 2Relationship between GPx4 enzyme content and activity in human atrial myocardium. GPx4 enzyme activity (μmol·min−1·g−1 total protein) and total GPx4 enzyme (mg) were measured in fresh lysates prepared from samples of human atrial myocardium using protocols described in Methods section. Both enzyme activity and enzyme concentration values shown here are normalized against the total tissue protein (g). Each symbol corresponds to one individual patient (N = 189 patients). Statistical significance was calculated using simple linear regression, with dashed lines showing 95% confidence intervals.
Figure 3GPX4 variants associated with decreased GPx4 enzyme content but increased activity in human atrial myocardium. Five distinct polymorphisms associated with decreased tissue levels of GPx4 enzyme (A) but increased GPx4 activity (B) are shown in the panels above. Each open circle represents one patient, open bars = Homozygous for the Referent nucleotide, hatched bars = Heterozygous for the variant nucleotide (i.e., one allele), filled bars = Homozygous for the variant nucleotide. **** p < 0.0001, *** p < 0.001, ** p < 0.01, * p < 0.05 for main effect between genotypes indicated.
Figure 4GPX4 variants associated with increased GPx4 enzyme content but decreased activity in human atrial myocardium. Two distinct polymorphisms associated with increased tissue levels of GPx4 protein (A) but decreased GPx4 activity (B) are shown in the panels above. Each open circle represents one patient, open bars = Homozygous for the Referent nucleotide, hatched bars = Heterozygous for the variant nucleotide (i.e., one allele), filled bars = Homozygous for the variant nucleotide. **** p < 0.0001, *** p < 0.001, ** p < 0.01 for main effect between genotypes indicated.