Literature DB >> 35445726

Pancreatic Ductal Carcinoma Risk Associated With Hereditary Cancer-Risk Genes.

Anna Gardiner1, John Kidd1, Maria C Elias2, Kayla Young2, Brent Mabey1, Nassim Taherian2, Shelly Cummings2, Mokenge Malafa3, Eric Rosenthal2, Jennifer B Permuth4.   

Abstract

BACKGROUND: Although several hereditary cancer predisposition genes have been implicated in pancreatic ductal adenocarcinoma (PDAC) susceptibility, gene-specific risks are not well defined and are potentially biased because of the design of previous studies. More precise and unbiased risk estimates can result in screening and prevention better tailored to genetic findings.
METHODS: This is a retrospective analysis of 676 667 individuals, 2445 of whom had a personal diagnosis of PDAC, who received multigene panel testing between 2013 and 2020 from a single laboratory. Clinical data were obtained from test requisition forms. Multivariable logistic regression models determined the increased risk of PDAC because of pathogenic variants (PVs) in various genes as adjusted odds ratios (ORs) with 95% confidence intervals (CIs). Multivariable odds ratios were adjusted for age, personal and/or family cancer history, and ancestry.
RESULTS: Overall, 11.1% of patients with PDAC had a PV. Statistically significantly elevated PDAC risk (2-sided P < .05) was observed for CDK2NA (p16INK4a) (OR = 8.69, 95% CI = 4.69 to 16.12), ATM (OR = 3.44, 95% CI = 2.58 to 4.60), MSH2 (OR = 3.17, 95% CI = 1.70 to 5.91), PALB2 (OR = 3.09, 95% CI = 2.02 to 4.74), BRCA2 (OR = 2.55, 95% CI = 1.99 to 3.27), and BRCA1 (OR = 1.62, 95% CI = 1.07 to 2.43).
CONCLUSIONS: This study provides PDAC risk estimates for 6 genes commonly included in multigene panel testing for hereditary cancer risk. These estimates are lower than those from previous studies, possibly because of adjustment for family history, and support current recommendations for germline testing in all PDAC patients, regardless of a personal or family history of cancer.
© The Author(s) 2022. Published by Oxford University Press.

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Year:  2022        PMID: 35445726      PMCID: PMC9275755          DOI: 10.1093/jnci/djac069

Source DB:  PubMed          Journal:  J Natl Cancer Inst        ISSN: 0027-8874            Impact factor:   11.816


Pancreatic ductal adenocarcinoma (PDAC) currently accounts for 3% of all cancer diagnoses in the United States but approximately 7% of all cancer deaths (1). The majority of the 60 000 cases expected in 2021 were diagnosed after disease had already metastasized regionally or to distant organs, with an overall 5-year survival rate of only 10% (1). PDAC is projected to be the second leading cause of cancer death by 2030, highlighting the need for improved strategies for prevention, early detection, and treatment (2). Emerging evidence suggests that screening can detect premalignant lesions and malignancies at earlier stages, resulting in improved survival (3,4). Studies report that 75%-90% of screen-detected PDAC is surgically resectable at diagnosis (5). Current screening options for PDAC such as endoscopic ultrasonography are unsuitable for use in the general population, because of cost, complexity, and the potential for associated morbidity (6). However, screening targeted to those at increased risk for the disease may be a practical and effective tool for improved survival. Germline pathogenic variants (PVs) in hereditary cancer genes are an important contributor to increased PDAC risk. Studies have found such PVs in approximately 10% of unselected PDAC cases (7,8) and in up to 30% of cases within populations enriched for family history of cancer and/or common founder variants (ie, Ashkenazi Jews) (8). In 2018, this data led the National Comprehensive Cancer Network (NCCN) to recommend germline genetic testing and counseling for all PDAC patients regardless of ancestry or additional personal and family history. For the PDAC patient, identification of PVs in certain genes may provide an opportunity to utilize targeted therapies, such as PARP inhibitors (9). For relatives, it provides an opportunity to utilize genetic testing to determine their own PV status and whether they are candidates for risk-reduction strategies targeted to PDAC and other cancers. Table 1 provides an overview of the genes with the best evidence to date supporting an association with PDAC risk, along with the associated syndromes, risk estimates, and management recommendations from professional societies. Because of limited sample sizes, risk estimates for most genes vary statistically significantly between studies, with wide confidence intervals.
Table 1.

PDAC-associated genes by syndrome, risk estimate, and management recommendations by professional societies

GenesSyndromePreviously published pancreatic cancer risk estimates, ORaProfessional society screening recommendations
APC Familial adenomatous polyposis (FAP)RR = 4.5 (10)Yes (5)b
ATM ATM-associated cancer riskOR = 4.2 (11)Yes (5,14,15)b
OR = 5.7 (12)
OR = 9.0 (13)
BRCA1 Hereditary breast and ovarian cancerOR = 2.6 (12)Yes (5,14,15)b
OR = 3.0 (13)
BRCA2 Hereditary breast and ovarian cancerOR = 6.2 (12)Yes (5,14,15)b
OR = 9.0 (13)
CDKN2A (p16INK4a)Hereditary melanoma/pancreatic cancerOR = 12.3 (12)Yes (5,14-16)b
OR = 36.0 (13)
MLH1 Lynch6.2% (17)Yes (5,14,15,18)b
OR = 6.7 (12)
MSH2/EPCAM Lynch0.5%-1.6% (17)Yes (5,14,15,18)b
OR = 7.1 (13)
MSH6 Lynch1.4%-1.6% (17)Yes (5,14,15,18)b
OR = 7.8 (13)
PMS2 LynchOR = 0.7 (12)Yes (18)b
≤1%-1.6% (17)
PALB2 PALB2-associated cancer riskRR = 2-3 (19)Yes (5,14,15)b
OR = 14.8 (13)
BMPR1A Juvenile polyposisElevated risk (18,20,21)No
SMAD4 Elevated risk (18,20,21)No
STK11 Peutz-Jeghers11.0% (17)Yes (5,14-16,18)c
36% (22)
TP53 Li-FraumeniOR = 6.7 (12)Yes (5)b
OR = 7.2 (13)

All other risk estimates are provided as cumulative risk. OR = odds ratio; RR = relative risk;

Recommendations based on if a first-degree or second-degree relative had a PDAC diagnosis;

Recommendations based on presence of pathogenic variant regardless of family history.

PDAC-associated genes by syndrome, risk estimate, and management recommendations by professional societies All other risk estimates are provided as cumulative risk. OR = odds ratio; RR = relative risk; Recommendations based on if a first-degree or second-degree relative had a PDAC diagnosis; Recommendations based on presence of pathogenic variant regardless of family history. This study estimates the PDAC risk associated with PVs in hereditary cancer genes based on data from multigene panel testing of 676 667 individuals, 2445 of whom had a personal diagnosis of PDAC. Multivariable logistic regression models (MLRM) were used to estimate risk within a clinical testing population adjusted for variables that influence ascertainment and/or eligibility for hereditary cancer testing. It has been shown previously that this methodology generates risk estimates similar to those from population-based studies, representing the magnitude of risk attributable to the genetic findings independent of other risk factors that impact ascertainment (23). This is especially important considering that PVs associated with an increased risk for PDAC are frequently identified in individuals tested for reasons other than a personal or family history of PDAC, such as a personal and/or family history of other cancers, or as incidental findings from testing performed for other reasons. These improved PDAC risk estimates will hopefully contribute to the development of management recommendations better tailored to genetic findings. We also present data supporting current recommendations for germline testing in all PDAC patients based on a high prevalence of clinically significant PVs regardless of additional personal and/or family history variables.

Methods

Testing Population

Between September 2013 and May 2020, 676 667 individuals underwent clinical genetic testing for suspicion of hereditary cancer risk, performed by Myriad Genetic Laboratories, Inc (Salt Lake City, UT, USA), a national Clinical Laboratory Improvement Amendments and College of American Pathology certified facility. Clinical information and self-reported ancestry were obtained from provider-completed test request forms. All individuals provided consent for clinical testing. Testing data were de-identified for analysis. A waiver of consent for research was obtained from Advarra institutional review board (Pro00036775). Patients were excluded from analysis if they were aged younger than 18 years at the time of testing, had prior genetic testing for familial or founder mutations, or were from states that disallow the use of de-identified genetic data for research. Patients were included in the PDAC cohort if a personal history of PDAC was indicated on the test request form.

Multigene Hereditary Cancer Panel Testing

Testing was performed on DNA extracted from blood or saliva using previously described technologies (24,25). The next generation sequencing hereditary pan-cancer panel test included 25-35 genes: APC, AXIN2, ATM, BARD1, BMPR1A, BRCA1, BRCA2, BRIP1, CDH1, CDK4, CDKN2A, CHEK2, EPCAM, GALNT12, GREM1, HOXB13, MLH1, MSH2, MSH3, MSH6, MUTYH, NBN, NTHL1, PALB2, PMS2, POLD1, POLE, PTEN, RAD51C, RAD51D, RNF43, RPS20, SMAD4, STK11, and TP53. Sequencing and large rearrangement analysis was performed for all genes on the panel except HOXB13 (sequencing only), POLD1 and POLE (sequencing only; limited to the exonuclease domains), GREM1 (large rearrangement only), and EPCAM (large rearrangement only). POLD1, POLE, and GREM1 were added to the panel in July 2016, HOXB13 in October 2018, and AXIN2, GALNT12, MSH3, NTHL1, RNF43, and RPS20 in February 2019.

Variant Classification

Variant classification was consistent with guidelines from the American College of Medical Genetics and Genomics and the Association for Molecular Pathology, as described previously (26-28). Variants with a laboratory classification of deleterious or suspected deleterious were considered PVs.

Statistical Analysis

MLRM were used to estimate PDAC risk associated with each gene for which there were at least 5 individuals with a personal history of PDAC also carrying a PV in that gene. Risk is expressed as odds ratios (OR) with 95% confidence intervals (CI), which estimate the relative risks conferred by mutations after accounting for other risk factors. It has been shown that these models generate unbiased risk estimates for breast and ovarian cancer, similar to results from population-based studies (23,29,30). All models were adjusted for age, ancestry, gender, and personal and/or family cancer histories. Two-sided P values less than .05 were considered statistically significant for the purposes of this study. Further details regarding coding of variables are provided in Supplementary Methods (available online). Analyses were conducted using SAS software (SAS Institute Inc, Cary, North Carolina, USA).

Results

Patient Characteristics

Among the 676 667 individuals included in the analysis, 2445 (0.4%) had a personal history of PDAC. Patient demographics are presented in Table 2. Most PDAC patients were female (57.1%) and 42.9% were male. Patients with a history of PDAC were mainly of Black or African (10.7%) or White or non-Hispanic (61.7%) ancestry. Providers indicated that most patients were tested for suspicion of hereditary breast and ovarian cancer (HBOC) (90.7%). The remaining (9.3%) patients were tested for suspicion of Lynch syndrome. Most (70.5%) patients were diagnosed with PDAC after age 50 years, with only 16.9% of patients diagnosed at or younger than age 50 years. Age of diagnosis was not known for 12.7% of patients.
Table 2.

Demographics of patients with pancreatic ductal carcinoma

CategoryPancreatic ductal carcinoma patients
All
With PV
Without PV
No. (%)No. (%)No. (%)
Total2445 (100)271 (100)2174 (100)
Gender
 Female1395 (57.1)143 (52.8)1252 (57.6)
 Male1050 (42.9)128 (47.2)922 (42.4)
Ancestry
 Ashkenazi Jewish28 (1.1)6 (2.2)22 (1.0)
 Asian61 (2.5)10 (3.7)51 (2.3)
 Black/African261 (10.7)28 (10.3)233 (10.7)
 Hispanic/Latino178 (7.3)15 (5.5)163 (7.5)
 Middle Eastern13 (0.5)1 (0.4)12 (0.6)
 Multiple ancestries indicated118 (4.8)11 (4.1)107 (4.9)
 Native American15 (0.6)1 (0.4)14 (0.6)
 None specified253 (10.3)23 (8.5)230 (10.6)
 Other7 (0.3)1 (0.4)6 (0.3)
 Pacific Islander2 (<0.1)1 (0.4)1 (<0.1)
 White/Non-Hispanic1509 (61.7)174 (64.2)1335 (61.4)
Reason for testing
 Clinical suspicion of HBOC2217 (90.7)236 (87.1)1981 (91.1)
 Clinical suspicion of Lynch syndrome228 (9.3)35 (12.9)193 (8.9)
Age at pancreatic ductal carcinoma diagnosis, y
<50412 (16.9)47 (17.3)365 (16.8)
 >501723 (70.5)191 (70.5)1532 (70.5)
 Missing310 (12.7)33 (12.2)277 (12.7)

HBOC = hereditary breast and ovarian cancer; PV = pathogenic variants.

Demographics of patients with pancreatic ductal carcinoma HBOC = hereditary breast and ovarian cancer; PV = pathogenic variants.

Genetic Testing for Patients With PDAC

The overall PV-positive rate was 11.1% (271 of 2445) among patients with PDAC. The distribution of PVs is presented in Table 3. PVs were most common in BRCA2, ATM, BRCA1, and PALB2 in our patient population (2.9%, 2.1%, 1.0%, and 0.9%, respectively). Ten (0.4%) patients with PDAC had a PV in more than 1 gene. These patients were not included in the risk estimate analysis. The median age at diagnosis of PDAC varied by gene, ranging from 46 to 76 years.
Table 3.

Pathogenic variant gene distribution

GenesNo.% of patients with PVsMedian age of PDAC diagnosis, y
BRCA2 712.959
ATM 522.162
BRCA1 25157
PALB2 230.954
CHEK2 200.864
CDKN2A (p16INK4a)130.563
BRIP1 120.563
MSH2 120.552
MSH6 80.360
NBN 60.255
PMS2 40.251
BARD1 30.162
MLH1 30.146
RAD51C 30.176
APC 20.155
RAD51D 20.149
CDH1 1<0.161
TP53 1<0.149
Multiple genesa100.469
Any27111.160

The following combinations were observed among individuals with PVs in multiple genes: ATM/BRCA2 (n = 3), ATM/CHEK2 (n = 2), ATM/BRIP1 (n = 1), ATM/CDKN2A (p16INK4a) (n = 1), ATM/PMS2 (n = 1), BRCA2/CDKN2A (p16INK4a) (n = 1), BRIP1/PALB2 (n = 1). PDAC = pancreatic ductal adenocarcinoma; PV =pathogenic variant.

Pathogenic variant gene distribution The following combinations were observed among individuals with PVs in multiple genes: ATM/BRCA2 (n = 3), ATM/CHEK2 (n = 2), ATM/BRIP1 (n = 1), ATM/CDKN2A (p16INK4a) (n = 1), ATM/PMS2 (n = 1), BRCA2/CDKN2A (p16INK4a) (n = 1), BRIP1/PALB2 (n = 1). PDAC = pancreatic ductal adenocarcinoma; PV =pathogenic variant. The July 2018 NCCN guideline update recommending germline testing for all patients with PDAC was correlated with an increase in the proportion of patients with PDAC within the tested population, suggesting a positive association between guideline recommendations and patients receiving germline testing. The PV rate declined after 2018 but remained close to 10% annually (Figure 1).
Figure 1.

PV rate from 2013 to 2020 in patients with PDAC referred for genetic testing. 2013 only includes data from the last 4 months of 2013, the year that the Myriad myRisk hereditary cancer test was launched. PV = pathogenic variants; PDAC = pancreatic ductal adenocarcinoma.

PV rate from 2013 to 2020 in patients with PDAC referred for genetic testing. 2013 only includes data from the last 4 months of 2013, the year that the Myriad myRisk hereditary cancer test was launched. PV = pathogenic variants; PDAC = pancreatic ductal adenocarcinoma. Among patients with a history of PDAC, 29.8% (728 of 2445) had a personal history of additional cancer(s). The PV rate among patients with PDAC and additional cancer(s) was 14.4% compared with a PV rate of 9.7% among those with no history of additional cancers (Table 4). Most patients with a PDAC diagnosis had a family history of cancer (84.5%; 2066 of 2445). The PV rate among patients with PDAC and a family history of cancer was 11.6% compared with a rate of 8.4% in patients with PDAC and no reported family history (Table 5).
Table 4.

Personal cancer history in patients with PDAC

Personal history of other cancersNo. testedNo. with a PV% with a PV
No additional cancer17171669.7
Any additional cancer or polypsa72810514.4
 Breast2684817.9
 Colorectal8289.8
 Ovarian32412.5
 Endometrial42921.4
 Prostate68710.3
 Melanoma38923.7
 Gastric11218.2
 Other2403815.8

Patients may have 1 or more cancers. Patients with multiple additional cancers are counted for each cancer for which they have a personal history. Twenty-three patients were tested with colon polyps of which 6 (26.1%) patients had a PV. Patients included had more than 20 polyps to align with National Comprehensive Cancer Network guidelines for APC testing. PDAC = pancreatic ductal adenocarcinoma; PV = pathogenic variant.

Table 5.

Family history of cancer in patients with PDAC

Family history of other cancersNo. testedNo. with a PV% with a PV
No family history of other cancer379328.4
Family history of any other cancer or polypsa206623911.6
 Breast101715315.0
 PDAC5867112.1
 Colorectal5257414.1
 Ovarian2884314.9
 Endometrial1181311.0
 Prostate4255312.5
 Melanoma1391913.7
 Gastric1992311.6
 Other106411110.4

Patients may have 1 or more cancers. Patients with multiple additional cancers are counted for each cancer for which they have a family history. Eight patients were tested with colon polyps of which 1 patient (12.5%) had a PV. Family members included had more than 20 polyps to align with National Comprehensive Cancer Network guidelines for APC testing. PDAC = pancreatic ductal carcinoma; PV = pathogenic variant.

Personal cancer history in patients with PDAC Patients may have 1 or more cancers. Patients with multiple additional cancers are counted for each cancer for which they have a personal history. Twenty-three patients were tested with colon polyps of which 6 (26.1%) patients had a PV. Patients included had more than 20 polyps to align with National Comprehensive Cancer Network guidelines for APC testing. PDAC = pancreatic ductal adenocarcinoma; PV = pathogenic variant. Family history of cancer in patients with PDAC Patients may have 1 or more cancers. Patients with multiple additional cancers are counted for each cancer for which they have a family history. Eight patients were tested with colon polyps of which 1 patient (12.5%) had a PV. Family members included had more than 20 polyps to align with National Comprehensive Cancer Network guidelines for APC testing. PDAC = pancreatic ductal carcinoma; PV = pathogenic variant.

Risk Estimates (OR) for PDAC

Risk estimates derived from the logistic regression analysis are presented in Table 6. PVs in CDKN2A (p16INK4a), ATM, MSH2, PALB2, BRCA2, and BRCA1 were associated with a statistically significantly higher risk of PDAC compared with PV-negative individuals after accounting for age, gender, personal and/or family cancer history, and ancestry (P < .05). The highest risk of PDAC was associated with PVs in CDK2NA (p16INK4a) (OR = 8.69, 95% CI = 4.69 to 16.12; P < .0001).
Table 6.

Gene-specific risk of pancreatic ductal adenocarcinoma

GeneOR (95% CI) P
CDKN2A (p16INK4a)8.69 (4.69 to 16.12)<.001
ATM3.44 (2.58 to 4.60)<.001
MSH23.17 (1.70 to 5.91)<.001
PALB23.09 (2.02 to 4.74)<.001
BRCA22.55 (1.99 to 3.27)<.001
BRCA11.62 (1.07 to 2.43).02
BRIP11.78 (0.99 to 3.20).05
NBN1.48 (0.65 to 3.36).35
MSH61.11 (0.55 to 2.25).78
CHEK21.04 (0.67 to 1.63).86

CI = confidence interval; OR = odds ratio.

Gene-specific risk of pancreatic ductal adenocarcinoma CI = confidence interval; OR = odds ratio.

Discussion

Several cancer predisposition genes have a well-established association with PDAC risk, but published gene-specific risk estimates vary widely and may not apply to carriers of PVs detected in individuals without a family history of the disease or other risk factors for PDAC. The estimates presented here are based on the results of multigene panel testing in 676 667 individuals, including 2445 PDAC patients. Overall, 11.1% of the PDAC patients were found to carry at least 1 PV in a hereditary cancer predisposition gene. We were able to calculate statistically significant PDAC risk for 6 genes, including CDKN2A, ATM, MSH2, PALB2, BRCA2, and BRCA1. The odds ratios for these genes are lower than those that have been reported previously. This is because, in part, these estimates having been adjusted for clinical and demographic characteristics that may be associated with cancer risk, including age, personal cancer history, family cancer history, and ancestry yielding odds ratios attributable specifically to having a PV in each of the studied genes. This methodology was originally applied by Kurian et al. (23) to evaluate gene-specific breast and ovarian cancer risks. Although the risks reported by Kurian et al. (23) were lower than previously reported for many genes, the findings align with recent reports from large cohorts in unselected populations, reinforcing the importance of adjusting for additional confounding risk factors (29,30). The only other PDAC risk estimates derived from multigene testing of comparably large samples are from the case-control analyses published by Hu et al., where PDAC cases tested at a commercial laboratory (13), or from a single cancer clinic (12), were compared with general population controls from the Genome Aggregation Database and the Exome Aggregation Database Consortium. This approach has become popular for investigating gene associations with cancer risks in samples for which large control groups are difficult to obtain. However, there are concerns about the reliability of genetic data available in these databases, especially for difficult to analyze regions of DNA. Additionally, previous studies have shown that the use of general population controls can artificially inflate the calculated relative risk, as the heterogeneity in sample ascertainment can lead to clinical cases enriched for PVs compared with general population cases (23,31). Among PDAC patients, PVs were most common in BRCA2 and ATM. This is consistent with other large studies, indicating that PVs in these genes are important contributors to inherited PDAC risk (7,12,32,33). The odds ratio for PDAC was 2.55 (95% CI = 1.99 to 3.27) for BRCA2 and 3.44 (95% CI = 2.58 to 4.60) for ATM, which is less than half of what was previously reported in other large studies (12,13). PVs in PALB2 were relatively common in PDAC patients. The 3.09 odds ratio (95% CI = 2.02 to 4.74) calculated for PALB2 is close to the 2.37 [relative risk estimated in a previous study of 534 families with known PVs in PALB2 (5) but much lower than the 14.8 odds ratio (95% CI = 8.12 to 26.22) calculated elsewhere (12)]. CDK2NA (p16INK4a) is consistently found to be one of the highest risk genes for PDAC in the published literature, with reported risks ranging from a 12- to 36-fold increased risk in carriers (12,13). CDKN2A (p16INK4a) conferred the highest PDAC risk of the genes evaluated here (OR = 8.69, 95% CI = 4.69 to 16.12), although the confidence interval is wide because of the relatively small number of individuals identified with PVs in this gene. Additional studies may be needed to better refine the gene-specific risk, but the body of evidence consistently shows a high risk of PDAC in CDKN2A (p16INK4a) PV carriers, supporting recommendations for PDAC screening in unaffected carriers. Individuals with Lynch syndrome are believed to have an increased risk for PDAC, and screening is currently recommended for carriers of PVs in MLH1, MSH2, and MSH6 if they have a first- or second-degree relative with PDAC (5,14,18). However, risk estimates for these genes are inconsistent between studies. We calculated a 3.17 odds ratio (95% CI = 1.70 to 5.91) for MSH2, based on 12 PVs identified in PDAC patients. MSH6 PVs were identified in 8 individuals with PDAC, but the odds ratio was not statistically significantly different from 1. No other Lynch gene had sufficient findings for analysis. Previous studies report an 11- to 36-fold increased PDAC risk associated with PVs in STK11 (17,22). We did not identify any STK11 PVs in PDAC patients, which is consistent with other studies reporting on the outcomes of multigene panel testing in adults with PDAC (12,13). This is probably because individuals with PVs in this gene are often ascertained at a young age based on clinical manifestations of Peutz-Jeghers syndrome. The odds ratio for PDAC associated with CHEK2 was not statistically significant, although CHEK2 PVs were found in 0.8% of the PDAC patients. CHEK2 is not considered to be a PDAC risk gene, and PVs in CHEK2 are relatively common in patients referred for hereditary cancer testing (12,34). BRIP1 PVs were also relatively common, found in 0.5% of the PDAC patients. The 1.78 odds ratio (95% CI = 0.99 to 3.20) for BRIP1 was approaching statistical significance, but a larger sample size could likely yield more definitive results. Consistent with previous studies, our results support the 2018 NCCN guideline expansion recommending multigene hereditary cancer panel testing in patients diagnosed with PDAC at any age, without additional clinical history requirements (12,32,33). The number of PDAC patients referred for testing after the guideline expansion increased, with a drop in the positive rate, although it remained close to 10%. The positive rate was somewhat enriched in patients with a personal or family history of additional cancers but remained above 8% even among patients with no additional personal or family cancer history. Our study has some limitations. Clinical information was obtained from provider-completed test requisition forms in conjunction with clinical testing and was not verified. It is possible that some of the reported pancreatic cancers were endocrine tumors rather than exocrine PDAC. However, it is unlikely that testing would have been ordered for a patient with an endocrine pancreatic tumor, given that the testing criteria are specific to PDAC and the gene panel used for testing does not include any of the genes currently believed to be relevant to endocrine pancreatic tumors. We did not address other factors that may contribute to increased risk, such as environment or lifestyle. The majority of patients included in this study were referred for testing due to suspicion of HBOC or Lynch syndrome, which may impact the observed cancer histories (5). However, multigene panel testing is recommended for a variety of hereditary cancer syndromes beyond HBOC and Lynch, which we observed in our testing population. Additionally, although this study included one of the largest cohorts of patients with PDAC tested to date, there were still limited numbers of PVs in many genes, limiting ability to estimate the risk associated with those genes. The lower risk estimates found in this study may have broader implications for gene-specific PDAC risk management in unaffected individuals, although the impact of additional clinical factors, such as family history and other PDAC risk factors will need further investigation. One area for future investigation is the average age of diagnosis, which varied within the group of genes for which there are statistically significant odds ratio, ranging from 63 for CDKN2A to 52 for MSH2. This could impact recommendations for the age at which to initiate screening. The MLRM methodology used for this study can in theory be applied to pooled datasets from multiple clinical laboratories, which would be a powerful strategy for obtaining the larger sample sizes required to better resolve these questions. Findings from this study provide statistically significant gene-specific PDAC risk estimates for CDKN2A (p16INK4a), ATM, MSH2, PALB2, BRCA1, and BRCA2. These estimates are lower than those from previous studies, likely because of the use of a MLRM methodology. CDK2NA (p16INK4a) was associated with the highest PDAC risk, consistent with previous findings. Our data also validate current testing recommendations for all PDAC patients. Although positive rates have declined over time, as testing criteria have become broader, the proportion of individuals with PDAC positive for a PV in a clinically important hereditary cancer gene remains high regardless of personal or family cancer history. Genetic findings provide critical information that can be used to target screening and prevention options for PDAC and other cancers to unaffected individuals, as well as potentially informing therapeutic options for patients already diagnosed with this disease.

Funding

This work was supported by Myriad Genetics, which markets a hereditary cancer panel.

Notes

Role of the funder: Myriad Genetics provided support in the design of the study, collection, analysis, interpretation of data, and writing the manuscript. Disclosures: AG, JK, ME, KY, BM, NT, SC, and ER were employed by Myriad Genetics, Inc, at the time this study was conducted and received salary and stock options. Author contributions: Anna Gardiner: Conceptualization, Methodology, Data Curation, Writing—Original Draft, Writing—Review and Editing, Visualization. John Kidd: Conceptualization, Validation, Formal Analysis, Data Curation, Writing—Review and Editing. Maria Elias: Conceptualization, Data Curation, Writing—Original Draft, Writing—Review and Editing. Kayla Young: Conceptualization, Data Curation, Writing—Original Draft, Writing—Review and Editing. Brent Mabey: Validation, Formal Analysis. Nassim Taherian: Conceptualization, Writing—Review and Editing. Shelly Cummings: Writing—Review and Editing. Mokenge Malafa: Writing—Review and Editing. Eric Rosenthal: Conceptualization, Formal Analysis, Writing—Original Draft, Writing—Review and Editing. Jennifer Permuth: Conceptualization, Formal Analysis, Writing—Original Draft, Writing—Review and Editing, Supervision. Acknowledgements: The authors would like to thank Jennifer Saam, MS, PhD, and Johnathan Lancaster, MD, PhD, for their assistance with manuscript development and Krystal Brown, PhD, for her assistance in the review of this manuscript.

Data Availability

The data that support the findings of this study are available from Myriad upon reasonable request. Requests can be initiated by contacting the corresponding author by email. Data requests will be reviewed by Myriad and will be made available assuming the intent is to advance research, there are no patient privacy or safety concerns, and the data will not be made open access. Click here for additional data file.
  30 in total

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Authors:  J M Eggington; K R Bowles; K Moyes; S Manley; L Esterling; S Sizemore; E Rosenthal; A Theisen; J Saam; C Arnell; D Pruss; J Bennett; L A Burbidge; B Roa; R J Wenstrup
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Journal:  Cancer Genet       Date:  2017-09-25

3.  A Population-Based Study of Genes Previously Implicated in Breast Cancer.

Authors:  Chunling Hu; Steven N Hart; Rohan Gnanaolivu; Hongyan Huang; Kun Y Lee; Jie Na; Chi Gao; Jenna Lilyquist; Siddhartha Yadav; Nicholas J Boddicker; Raed Samara; Josh Klebba; Christine B Ambrosone; Hoda Anton-Culver; Paul Auer; Elisa V Bandera; Leslie Bernstein; Kimberly A Bertrand; Elizabeth S Burnside; Brian D Carter; Heather Eliassen; Susan M Gapstur; Mia Gaudet; Christopher Haiman; James M Hodge; David J Hunter; Eric J Jacobs; Esther M John; Charles Kooperberg; Allison W Kurian; Loic Le Marchand; Sara Lindstroem; Tricia Lindstrom; Huiyan Ma; Susan Neuhausen; Polly A Newcomb; Katie M O'Brien; Janet E Olson; Irene M Ong; Tuya Pal; Julie R Palmer; Alpa V Patel; Sonya Reid; Lynn Rosenberg; Dale P Sandler; Christopher Scott; Rulla Tamimi; Jack A Taylor; Amy Trentham-Dietz; Celine M Vachon; Clarice Weinberg; Song Yao; Argyrios Ziogas; Jeffrey N Weitzel; David E Goldgar; Susan M Domchek; Katherine L Nathanson; Peter Kraft; Eric C Polley; Fergus J Couch
Journal:  N Engl J Med       Date:  2021-01-20       Impact factor: 91.245

4.  Benefit of Surveillance for Pancreatic Cancer in High-Risk Individuals: Outcome of Long-Term Prospective Follow-Up Studies From Three European Expert Centers.

Authors:  Hans Vasen; Isaura Ibrahim; Carmen Guillen Ponce; Emily P Slater; Elvira Matthäi; Alfredo Carrato; Julie Earl; Kristin Robbers; Anneke M van Mil; Thomas Potjer; Bert A Bonsing; Wouter H de Vos Tot Nederveen Cappel; Wilma Bergman; Martin Wasser; Hans Morreau; Günter Klöppel; Christoph Schicker; Martin Steinkamp; Jens Figiel; Irene Esposito; Evelina Mocci; Enrique Vazquez-Sequeiros; Alfonso Sanjuanbenito; Maria Muñoz-Beltran; José Montans; Peter Langer; Volker Fendrich; Detlef K Bartsch
Journal:  J Clin Oncol       Date:  2016-04-25       Impact factor: 44.544

5.  Screening for Pancreatic Cancer: US Preventive Services Task Force Reaffirmation Recommendation Statement.

Authors:  Douglas K Owens; Karina W Davidson; Alex H Krist; Michael J Barry; Michael Cabana; Aaron B Caughey; Susan J Curry; Chyke A Doubeni; John W Epling; Martha Kubik; C Seth Landefeld; Carol M Mangione; Lori Pbert; Michael Silverstein; Melissa A Simon; Chien-Wen Tseng; John B Wong
Journal:  JAMA       Date:  2019-08-06       Impact factor: 56.272

6.  Burden of hereditary cancer susceptibility in unselected patients with pancreatic ductal adenocarcinoma referred for germline screening.

Authors:  Carol Cremin; Michael Kuan-Ching Lee; Quan Hong; Carolyn Hoeschen; Anna Mackenzie; Katherine Dixon; Mary McCullum; Jennifer Nuk; Steve Kalloger; Joanna Karasinska; Charles Scudamore; Peter T W Kim; Fergal Donnellan; Eric C S Lam; Howard J Lim; Cynthia L Neben; Will Stedden; Alicia Y Zhou; David F Schaeffer; Sophie Sun; Daniel J Renouf; Kasmintan A Schrader
Journal:  Cancer Med       Date:  2020-04-07       Impact factor: 4.452

7.  Breast Cancer Risk Genes - Association Analysis in More than 113,000 Women.

Authors:  Leila Dorling; Sara Carvalho; Jamie Allen; Anna González-Neira; Craig Luccarini; Cecilia Wahlström; Karen A Pooley; Michael T Parsons; Cristina Fortuno; Qin Wang; Manjeet K Bolla; Joe Dennis; Renske Keeman; M Rosario Alonso; Nuria Álvarez; Belen Herraez; Victoria Fernandez; Rocio Núñez-Torres; Ana Osorio; Jeanette Valcich; Minerva Li; Therese Törngren; Patricia A Harrington; Caroline Baynes; Don M Conroy; Brennan Decker; Laura Fachal; Nasim Mavaddat; Thomas Ahearn; Kristiina Aittomäki; Natalia N Antonenkova; Norbert Arnold; Patrick Arveux; Margreet G E M Ausems; Päivi Auvinen; Heiko Becher; Matthias W Beckmann; Sabine Behrens; Marina Bermisheva; Katarzyna Białkowska; Carl Blomqvist; Natalia V Bogdanova; Nadja Bogdanova-Markov; Stig E Bojesen; Bernardo Bonanni; Anne-Lise Børresen-Dale; Hiltrud Brauch; Michael Bremer; Ignacio Briceno; Thomas Brüning; Barbara Burwinkel; David A Cameron; Nicola J Camp; Archie Campbell; Angel Carracedo; Jose E Castelao; Melissa H Cessna; Stephen J Chanock; Hans Christiansen; J Margriet Collée; Emilie Cordina-Duverger; Sten Cornelissen; Kamila Czene; Thilo Dörk; Arif B Ekici; Christoph Engel; Mikael Eriksson; Peter A Fasching; Jonine Figueroa; Henrik Flyger; Asta Försti; Marike Gabrielson; Manuela Gago-Dominguez; Vassilios Georgoulias; Fabian Gil; Graham G Giles; Gord Glendon; Encarna B Gómez Garcia; Grethe I Grenaker Alnæs; Pascal Guénel; Andreas Hadjisavvas; Lothar Haeberle; Eric Hahnen; Per Hall; Ute Hamann; Elaine F Harkness; Jaana M Hartikainen; Mikael Hartman; Wei He; Bernadette A M Heemskerk-Gerritsen; Peter Hillemanns; Frans B L Hogervorst; Antoinette Hollestelle; Weang Kee Ho; Maartje J Hooning; Anthony Howell; Keith Humphreys; Faiza Idris; Anna Jakubowska; Audrey Jung; Pooja Middha Kapoor; Michael J Kerin; Elza Khusnutdinova; Sung-Won Kim; Yon-Dschun Ko; Veli-Matti Kosma; Vessela N Kristensen; Kyriacos Kyriacou; Inge M M Lakeman; Jong Won Lee; Min Hyuk Lee; Jingmei Li; Annika Lindblom; Wing-Yee Lo; Maria A Loizidou; Artitaya Lophatananon; Jan Lubiński; Robert J MacInnis; Michael J Madsen; Arto Mannermaa; Mehdi Manoochehri; Siranoush Manoukian; Sara Margolin; Maria Elena Martinez; Tabea Maurer; Dimitrios Mavroudis; Catriona McLean; Alfons Meindl; Arjen R Mensenkamp; Kyriaki Michailidou; Nicola Miller; Nur Aishah Mohd Taib; Kenneth Muir; Anna Marie Mulligan; Heli Nevanlinna; William G Newman; Børge G Nordestgaard; Pei-Sze Ng; Jan C Oosterwijk; Sue K Park; Tjoung-Won Park-Simon; Jose I A Perez; Paolo Peterlongo; David J Porteous; Karolina Prajzendanc; Darya Prokofyeva; Paolo Radice; Muhammad U Rashid; Valerie Rhenius; Matti A Rookus; Thomas Rüdiger; Emmanouil Saloustros; Elinor J Sawyer; Rita K Schmutzler; Andreas Schneeweiss; Peter Schürmann; Mitul Shah; Christof Sohn; Melissa C Southey; Harald Surowy; Maija Suvanto; Somchai Thanasitthichai; Ian Tomlinson; Diana Torres; Thérèse Truong; Maria Tzardi; Yana Valova; Christi J van Asperen; Rob M Van Dam; Ans M W van den Ouweland; Lizet E van der Kolk; Elke M van Veen; Camilla Wendt; Justin A Williams; Xiaohong R Yang; Sook-Yee Yoon; M Pilar Zamora; D Gareth Evans; Miguel de la Hoya; Jacques Simard; Antonis C Antoniou; Åke Borg; Irene L Andrulis; Jenny Chang-Claude; Montserrat García-Closas; Georgia Chenevix-Trench; Roger L Milne; Paul D P Pharoah; Marjanka K Schmidt; Amanda B Spurdle; Maaike P G Vreeswijk; Javier Benitez; Alison M Dunning; Anders Kvist; Soo H Teo; Peter Devilee; Douglas F Easton
Journal:  N Engl J Med       Date:  2021-01-20       Impact factor: 91.245

8.  Detection of large rearrangements in a hereditary pan-cancer panel using next-generation sequencing.

Authors:  Debora Mancini-DiNardo; Thaddeus Judkins; John Kidd; Ryan Bernhisel; Courtney Daniels; Krystal Brown; Kirsten Meek; Jonathan Craft; Jayson Holladay; Brian Morris; Benjamin B Roa
Journal:  BMC Med Genomics       Date:  2019-10-17       Impact factor: 3.063

9.  Multigene Hereditary Cancer Panels Reveal High-Risk Pancreatic Cancer Susceptibility Genes.

Authors:  Chunling Hu; Holly LaDuca; Hermela Shimelis; Eric C Polley; Jenna Lilyquist; Steven N Hart; Jie Na; Abigail Thomas; Kun Y Lee; Brigette Tippin Davis; Mary Helen Black; Tina Pesaran; David E Goldgar; Jill S Dolinsky; Fergus J Couch
Journal:  JCO Precis Oncol       Date:  2018-07-25

10.  A systematic review of the prevalence of germline pathogenic variants in patients with pancreatic cancer.

Authors:  Esteban Astiazaran-Symonds; Alisa M Goldstein
Journal:  J Gastroenterol       Date:  2021-07-13       Impact factor: 6.772

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Review 1.  Germline Aberrations in Pancreatic Cancer: Implications for Clinical Care.

Authors:  Raffaella Casolino; Vincenzo Corbo; Philip Beer; Chang-Il Hwang; Salvatore Paiella; Valentina Silvestri; Laura Ottini; Andrew V Biankin
Journal:  Cancers (Basel)       Date:  2022-06-30       Impact factor: 6.575

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