| Literature DB >> 35445726 |
Anna Gardiner1, John Kidd1, Maria C Elias2, Kayla Young2, Brent Mabey1, Nassim Taherian2, Shelly Cummings2, Mokenge Malafa3, Eric Rosenthal2, Jennifer B Permuth4.
Abstract
BACKGROUND: Although several hereditary cancer predisposition genes have been implicated in pancreatic ductal adenocarcinoma (PDAC) susceptibility, gene-specific risks are not well defined and are potentially biased because of the design of previous studies. More precise and unbiased risk estimates can result in screening and prevention better tailored to genetic findings.Entities:
Mesh:
Year: 2022 PMID: 35445726 PMCID: PMC9275755 DOI: 10.1093/jnci/djac069
Source DB: PubMed Journal: J Natl Cancer Inst ISSN: 0027-8874 Impact factor: 11.816
PDAC-associated genes by syndrome, risk estimate, and management recommendations by professional societies
| Genes | Syndrome | Previously published pancreatic cancer risk estimates, OR | Professional society screening recommendations |
|---|---|---|---|
|
| Familial adenomatous polyposis (FAP) | RR = 4.5 ( | Yes ( |
|
| ATM-associated cancer risk | OR = 4.2 ( | Yes ( |
| OR = 5.7 ( | |||
| OR = 9.0 ( | |||
|
| Hereditary breast and ovarian cancer | OR = 2.6 ( | Yes ( |
| OR = 3.0 ( | |||
|
| Hereditary breast and ovarian cancer | OR = 6.2 ( | Yes ( |
| OR = 9.0 ( | |||
|
| Hereditary melanoma/pancreatic cancer | OR = 12.3 ( | Yes ( |
| OR = 36.0 ( | |||
|
| Lynch | 6.2% ( | Yes ( |
| OR = 6.7 ( | |||
|
| Lynch | 0.5%-1.6% ( | Yes ( |
| OR = 7.1 ( | |||
|
| Lynch | 1.4%-1.6% ( | Yes ( |
| OR = 7.8 ( | |||
|
| Lynch | OR = 0.7 ( | Yes ( |
| ≤1%-1.6% ( | |||
|
|
| RR = 2-3 ( | Yes ( |
| OR = 14.8 ( | |||
|
| Juvenile polyposis | Elevated risk ( | No |
|
| Elevated risk ( | No | |
|
| Peutz-Jeghers | 11.0% ( | Yes ( |
| 36% ( | |||
|
| Li-Fraumeni | OR = 6.7 ( | Yes ( |
| OR = 7.2 ( |
All other risk estimates are provided as cumulative risk. OR = odds ratio; RR = relative risk;
Recommendations based on if a first-degree or second-degree relative had a PDAC diagnosis;
Recommendations based on presence of pathogenic variant regardless of family history.
Demographics of patients with pancreatic ductal carcinoma
| Category | Pancreatic ductal carcinoma patients | ||
|---|---|---|---|
| All | With PV | Without PV | |
| No. (%) | No. (%) | No. (%) | |
| Total | 2445 (100) | 271 (100) | 2174 (100) |
| Gender | |||
| Female | 1395 (57.1) | 143 (52.8) | 1252 (57.6) |
| Male | 1050 (42.9) | 128 (47.2) | 922 (42.4) |
| Ancestry | |||
| Ashkenazi Jewish | 28 (1.1) | 6 (2.2) | 22 (1.0) |
| Asian | 61 (2.5) | 10 (3.7) | 51 (2.3) |
| Black/African | 261 (10.7) | 28 (10.3) | 233 (10.7) |
| Hispanic/Latino | 178 (7.3) | 15 (5.5) | 163 (7.5) |
| Middle Eastern | 13 (0.5) | 1 (0.4) | 12 (0.6) |
| Multiple ancestries indicated | 118 (4.8) | 11 (4.1) | 107 (4.9) |
| Native American | 15 (0.6) | 1 (0.4) | 14 (0.6) |
| None specified | 253 (10.3) | 23 (8.5) | 230 (10.6) |
| Other | 7 (0.3) | 1 (0.4) | 6 (0.3) |
| Pacific Islander | 2 (<0.1) | 1 (0.4) | 1 (<0.1) |
| White/Non-Hispanic | 1509 (61.7) | 174 (64.2) | 1335 (61.4) |
| Reason for testing | |||
| Clinical suspicion of HBOC | 2217 (90.7) | 236 (87.1) | 1981 (91.1) |
| Clinical suspicion of Lynch syndrome | 228 (9.3) | 35 (12.9) | 193 (8.9) |
| Age at pancreatic ductal carcinoma diagnosis, y | |||
| | 412 (16.9) | 47 (17.3) | 365 (16.8) |
| >50 | 1723 (70.5) | 191 (70.5) | 1532 (70.5) |
| Missing | 310 (12.7) | 33 (12.2) | 277 (12.7) |
HBOC = hereditary breast and ovarian cancer; PV = pathogenic variants.
Pathogenic variant gene distribution
| Genes | No. | % of patients with PVs | Median age of PDAC diagnosis, y |
|---|---|---|---|
|
| 71 | 2.9 | 59 |
|
| 52 | 2.1 | 62 |
|
| 25 | 1 | 57 |
|
| 23 | 0.9 | 54 |
|
| 20 | 0.8 | 64 |
|
| 13 | 0.5 | 63 |
|
| 12 | 0.5 | 63 |
|
| 12 | 0.5 | 52 |
|
| 8 | 0.3 | 60 |
|
| 6 | 0.2 | 55 |
|
| 4 | 0.2 | 51 |
|
| 3 | 0.1 | 62 |
|
| 3 | 0.1 | 46 |
|
| 3 | 0.1 | 76 |
|
| 2 | 0.1 | 55 |
|
| 2 | 0.1 | 49 |
|
| 1 | <0.1 | 61 |
|
| 1 | <0.1 | 49 |
| Multiple genes | 10 | 0.4 | 69 |
| Any | 271 | 11.1 | 60 |
The following combinations were observed among individuals with PVs in multiple genes: ATM/BRCA2 (n = 3), ATM/CHEK2 (n = 2), ATM/BRIP1 (n = 1), ATM/CDKN2A (p16INK4a) (n = 1), ATM/PMS2 (n = 1), BRCA2/CDKN2A (p16INK4a) (n = 1), BRIP1/PALB2 (n = 1). PDAC = pancreatic ductal adenocarcinoma; PV =pathogenic variant.
Figure 1.PV rate from 2013 to 2020 in patients with PDAC referred for genetic testing. 2013 only includes data from the last 4 months of 2013, the year that the Myriad myRisk hereditary cancer test was launched. PV = pathogenic variants; PDAC = pancreatic ductal adenocarcinoma.
Personal cancer history in patients with PDAC
| Personal history of other cancers | No. tested | No. with a PV | % with a PV |
|---|---|---|---|
| No additional cancer | 1717 | 166 | 9.7 |
| Any additional cancer or polyps | 728 | 105 | 14.4 |
| Breast | 268 | 48 | 17.9 |
| Colorectal | 82 | 8 | 9.8 |
| Ovarian | 32 | 4 | 12.5 |
| Endometrial | 42 | 9 | 21.4 |
| Prostate | 68 | 7 | 10.3 |
| Melanoma | 38 | 9 | 23.7 |
| Gastric | 11 | 2 | 18.2 |
| Other | 240 | 38 | 15.8 |
Patients may have 1 or more cancers. Patients with multiple additional cancers are counted for each cancer for which they have a personal history. Twenty-three patients were tested with colon polyps of which 6 (26.1%) patients had a PV. Patients included had more than 20 polyps to align with National Comprehensive Cancer Network guidelines for APC testing. PDAC = pancreatic ductal adenocarcinoma; PV = pathogenic variant.
Family history of cancer in patients with PDAC
| Family history of other cancers | No. tested | No. with a PV | % with a PV |
|---|---|---|---|
| No family history of other cancer | 379 | 32 | 8.4 |
| Family history of any other cancer or polyps | 2066 | 239 | 11.6 |
| Breast | 1017 | 153 | 15.0 |
| PDAC | 586 | 71 | 12.1 |
| Colorectal | 525 | 74 | 14.1 |
| Ovarian | 288 | 43 | 14.9 |
| Endometrial | 118 | 13 | 11.0 |
| Prostate | 425 | 53 | 12.5 |
| Melanoma | 139 | 19 | 13.7 |
| Gastric | 199 | 23 | 11.6 |
| Other | 1064 | 111 | 10.4 |
Patients may have 1 or more cancers. Patients with multiple additional cancers are counted for each cancer for which they have a family history. Eight patients were tested with colon polyps of which 1 patient (12.5%) had a PV. Family members included had more than 20 polyps to align with National Comprehensive Cancer Network guidelines for APC testing. PDAC = pancreatic ductal carcinoma; PV = pathogenic variant.
Gene-specific risk of pancreatic ductal adenocarcinoma
| Gene | OR (95% CI) |
|
|---|---|---|
| CDKN2A (p16INK4a) | 8.69 (4.69 to 16.12) | <.001 |
| ATM | 3.44 (2.58 to 4.60) | <.001 |
| MSH2 | 3.17 (1.70 to 5.91) | <.001 |
| PALB2 | 3.09 (2.02 to 4.74) | <.001 |
| BRCA2 | 2.55 (1.99 to 3.27) | <.001 |
| BRCA1 | 1.62 (1.07 to 2.43) | .02 |
| BRIP1 | 1.78 (0.99 to 3.20) | .05 |
| NBN | 1.48 (0.65 to 3.36) | .35 |
| MSH6 | 1.11 (0.55 to 2.25) | .78 |
| CHEK2 | 1.04 (0.67 to 1.63) | .86 |
CI = confidence interval; OR = odds ratio.