| Literature DB >> 35440588 |
Shahin Sowlati-Hashjin1, Vojtěch Šadek2,3, SeyedAbdolreza Sadjadi4, Mikko Karttunen5,6,7, Angel Martín-Pendás8, Cina Foroutan-Nejad9.
Abstract
Recent discovery of an unusual bond between Na and B in NaBH3- motivated us to look for potentially similar bonds, which remained unnoticed among systems isoelectronic with NaBH3-. Here, we report a novel family of collective interactions and a measure called exchange-correlation interaction collectivity index (ICIXC; [Formula: see text]) to characterize the extent of collective versus pairwise bonding. Unlike conventional bonds in which ICIXC remains close to one, in collective interactions ICIXC may approach zero. We show that collective interactions are commonplace among widely used organometallics, as well as among boron and aluminum complexes with the general formula [Ma+AR3]b- (A: C, B or Al). In these species, the metal atom interacts more efficiently with the substituents (R) on the central atoms than the central atoms (A) upon forming efficient collective interactions. Furthermore, collective interactions were also found among fluorine atoms of XFn systems (X: B or C). Some of organolithium and organomagnesium species have the lowest ICIXC among the more than 100 studied systems revealing the fact that collective interactions are rather a rule than an exception among organometallic species.Entities:
Year: 2022 PMID: 35440588 PMCID: PMC9018958 DOI: 10.1038/s41467-022-29504-0
Source DB: PubMed Journal: Nat Commun ISSN: 2041-1723 Impact factor: 17.694
Fig. 1Collective bonding cannot be presented a by Lewis structure.
Schematic representations of molecular geometries (a) the general Lewis structure of the studied species ([Ma+AX3]b−) in this work, and (b) the stabilizing/destabilizing nature of interactions in [Ma+AX3]b− clusters. While the 1,2 interactions in a Lewis structure are destabilizing or merely weakly stabilizing, the 1,3 interactions proved to be strongly stabilizing. Panels (c) and (d) provide schematic representations of the pyramidal and inverted [Ma+AX3]b− species studied in this work. The inverted structures are marked with i- throughout the article and are distinguishable by their negative Δ∠M‒A‒X values defined as the difference between the ∠M‒A‒X angle and a rectangle (shown as a grey dashed line perpendicular to the M‒A bond) as listed in Table 1, vide infra.
The Δ∠M‒A‒X angle, QTAIM atomic charges of M and A in MAX3 systems, Q(M) and Q(A), the IQA interaction energy and its interatomic exchange-correlation and Coulombic energy components between metal and Al, B, or central C atoms in the studied systems, VInt(M,A), VXC(M, A) and VC(M, A), and those of the metals with the substituents on the central atom, VXC(M, X) and VC(M, X), in kcal.mol−1.
| Molecules | ΔM‒A‒X | Q(M) | Q(A) | Q(X) | VXC(M,A) | VXC(M,X) | VC(M,A) | VC(M,X) | VInt(M,A) | VInt(M,X) |
|---|---|---|---|---|---|---|---|---|---|---|
| LiBH3−a | 5.11 | −0.010 | 1.326 | −0.772 | −20.8 | −4.9 | 42.1 | −27.8 | 21.3 | −32.7 |
| NaBH3−a | 4.59 | −0.195 | 1.524 | −0.776 | −18.7 | −6.6 | 19.3 | −9.5 | 0.6 | −16.1 |
| KBH3−a | 3.11 | −0.238 | 1.585 | −0.781 | −13.7 | −6.0 | 13.8 | −6.3 | 0.1 | −12.3 |
| MgBH3 | 3.36 | 0.468 | 1.627 | −0.698 | −33.6 | −11.9 | 133.9 | −58.2 | 100.3 | −70.1 |
| CaBH3a | 0.91 | 0.613 | 1.572 | −0.729 | −24.5 | −11.1 | 163.7 | −76.9 | 139.2 | −88.0 |
| LiAlH3− | 16.27 | 0.206 | 1.241 | −0.816 | −48.1 | −2.8 | 23.6 | −27.0 | −24.5 | −29.8 |
| NaAlH3−a | 14.86 | −0.135 | 1.587 | −0.817 | −39.1 | −3.4 | 3.5 | −2.1 | −35.6 | −5.5 |
| KAlH3−a | 13.13 | −0.204 | 1.681 | −0.825 | −24.1 | −2.7 | −0.9 | 0.4 | −25.0 | −2.3 |
| MgAlH3 | 2.83 | 0.172 | 2.112 | −0.761 | −17.9 | −7.3 | 41.9 | −13.7 | 23.9 | −21.0 |
| CaAlH3 | 3.73 | 0.352 | 1.986 | −0.779 | −24.9 | −6.5 | 80.2 | −30.2 | 55.3 | −36.7 |
| −33.89 | 0.887 | 1.471 | −0.786 | −11.3 | −24.1 | 239.5 | −128.9 | 228.3 | −153.0 | |
| LiCF3 | 25.14 | 0.918 | 1.197 | −0.705 | −21.3 | −0.7 | 93.8 | −78.9 | 72.5 | −79.6 |
| NaCF3 | 25.29 | 0.865 | 1.261 | −0.709 | −27.8 | −1.1 | 98.8 | −67.7 | 71.0 | −68.8 |
| BeCF3+ | 19.12 | 1.625 | 1.303 | −0.642 | −61.6 | −3.4 | 157.8 | −151.3 | 96.2 | −154.7 |
| MgCF3+c | 19.78 | 1.453 | 1.512 | −0.655 | −62.9 | −4.5 | 227.0 | −120.4 | 164.1 | −124.9 |
| −31.33 | 0.932 | 1.203 | −0.712 | −0.6 | −9.1 | 223.2 | −122.8 | 222.6 | −132.0 | |
| −30.18 | 0.934 | 1.220 | −0.718 | −0.9 | −10.1 | 188.8 | −103.8 | 187.9 | −113.9 | |
| −29.67c | 0.942 | 1.215 | −0.719 | −0.9 | −11.6 | 168.0 | −93.1 | 167.1 | −104.7 | |
| −33.31 | 1.830 | 1.229 | −0.686 | −2.3 | −19.2 | 403.1 | −234.2 | 400.8 | −253.4 | |
| −32.12 | 1.812 | 1.219 | −0.677 | −2.1 | −24.5 | 351.1 | −194.7 | 349.0 | −219.1 | |
| −31.72 | 1.838 | 1.221 | −0.686 | −1.8 | −23.6 | 338.3 | −188.6 | 336.5 | −212.2 | |
| −26.32 | 1.776 | 0.243 | −0.340 | −3.3 | −19.5 | 67.1 | −122.5 | 63.8 | −142.0 | |
| −19.53 | 1.727 | 0.184 | −0.304 | −7.2 | −23.5 | 41.5 | −80.0 | 34.3 | −103.5 | |
| −17.83 | 1.756 | 0.172 | −0.309 | −7.2 | −22.3 | 37.1 | −75.1 | 29.9 | −97.4 | |
| LiCH3 | 22.64 | 0.899 | −0.609 | −0.097 | −25.2 | −0.5 | −141.8 | −7.9 | −167.0 | −8.4 |
| NaCH3 | 20.98 | 0.757 | −0.536 | −0.074 | −40.1 | −1.1 | −86.3 | −4.3 | −126.4 | −5.4 |
| KCH3 | 22.09 | 0.805 | −0.516 | −0.096 | −35.3 | −1.0 | −77.8 | −6.2 | −113.1 | −7.2 |
| BeCH3+ | 19.08 | 1.669 | −0.971 | 0.101 | −68.5 | −1.5 | −476.9 | 30.8 | −545.4 | 29.3 |
| MgCH3+ | 16.63 | 1.397 | −0.605 | 0.069 | −78.9 | −1.9 | −196.6 | 16.4 | −275.5 | 14.5 |
| CaCH3+ | 22.07 | 1.618 | −0.621 | 0.001 | −71.1 | −1.9 | −201.3 | 4.0 | −272.4 | 2.1 |
| SrCH3+ | 22.03 | 1.616 | −0.587 | −0.010 | −71.9 | −1.9 | −183.5 | 1.9 | −255.4 | 0.0 |
| LiC(Ph)3 | −6.73 | 0.894 | −0.218 | −0.225 | −10.7 | −5.5 | −49.6 | −31.0 | −60.3 | −36.5 |
| NaC(Ph)3 | −5.35 | 0.907 | −0.161 | −0.249 | −8.8 | −6.8 | −29.0 | −29.4 | −37.8 | −36.2 |
| KC(Ph)3 | −3.84 | 0.894 | −0.142 | −0.250 | −10.8 | −10.1 | −22.7 | −25.2 | −33.5 | −35.3 |
| MgC(Ph)3+ | 10.67 | 1.088 | −0.391 | 0.101 | −56.3 | −10.0 | −120.9 | 7.6 | −177.2 | −2.4 |
| CaC(Ph)3+ | −6.42 | 1.554 | −0.214 | −0.113 | −29.8 | −26.0 | −65.4 | −47.4 | −95.2 | −73.4 |
| SrC(Ph)3+ | −4.37 | 1.561 | −0.214 | −0.116 | −32.8 | −25.8 | −64.5 | −41.9 | −97.3 | −67.7 |
| LiC(CH3)3c | 21.40 | 0.882 | −0.470 | −0.137 | −24.8 | −0.9 | −125.9 | −9.2 | −150.7 | −10.1 |
| NaC(CH3)3c | 20.60 | 0.716 | −0.329 | −0.129 | −38.8 | −2.0 | −65.8 | −6.7 | −104.6 | −8.7 |
| KC(CH3)3c | 21.18 | 0.799 | −0.295 | −0.168 | −32.2 | −1.6 | −58.8 | −10.2 | −91.0 | −11.8 |
| BeC(CH3)3+ | 16.88 | 1.417 | −0.772 | 0.119 | −79.2 | −3.8 | −357.6 | 27.2 | −436.8 | 23.4 |
| MgC(CH3)3+ | 15.52 | 1.136 | −0.428 | 0.097 | −72.1 | −5.0 | −130.2 | 15.2 | −202.3 | 10.2 |
| CaC(CH3)3+ | 19.04 | 1.539 | −0.412 | −0.043 | −71.5 | −3.7 | −153.6 | −5.6 | −225.3 | −9.3 |
| −12.92 | 0.799 | −0.197 | −0.201 | −14.1 | −11.6 | −27.1 | −32.3 | 41.2 | −43.9 | |
| −11.21 | 0.754 | −0.125 | −0.210 | −9.3 | −12.8 | −9.6 | −26.1 | −18.9 | −38.9 | |
| −7.01 | 0.783 | −0.162 | −0.207 | −13.7 | −14.2 | −16.4 | −21.7 | −30.1 | −36.0 | |
| −16.98 | 1.520 | −0.274 | −0.082 | −25.5 | −31.0 | −130.6 | −81.3 | −156.1 | −112.3 | |
| −5.76 | 0.300 | 0.033 | 0.222 | −7.1 | −10.9 | 1.1 | 4.9 | −6.1 | −6.0 | |
| −3.55 | 1.460 | −0.230 | −0.077 | −45.8 | −24.9 | −68.2 | −25.1 | −114 | −50.0 | |
| −0.32 | 1.466 | −0.247 | −0.073 | −53.1 | −23.0 | −74.3 | −20.2 | −127.4 | −43.2 |
The prefix i- denotes structures with an inverted geometry that have a negative M‒A‒X angle. The Δ∠M‒A‒X angle is defined as the difference between ∠M‒A‒X angle and a right angle as defined in ref. [9].
aData obtained from BS-DFT calculations.
bThe metal forms multiple (3,-1) CPs with the AX3 fragment.
cThe global minimum of the molecule.
di- represents inverted structures, see Fig. 1.
eThe global minimum of the molecule has a C point group, 1.6 kcal.mol−1 lower in energy; therefore, it is not discussed here.
Fig. 2Plotting the bonding energy components versus each other reveals the nature of bonding.
Interatomic exchange-correlation energy, VXC(A, B), versus interatomic Coulomb energy, VC(A, B). (a) The full plot and (b) a part of the original plot focusing on organometallics. The two blue and red dashed lines mark boundaries with VXC(A, B) = −31 kcal.mol−1 (corresponding to the interatomic exchange-correlation energy component of KCl/LiF, the upper limit of VXC(A, B) for ionic interactions) and VXC(A, B) = ‒94.4 kcal.mol−1 that is the lower limit of VXC(A, B) for conventionally known covalent bonds (Se‒Se bond in H2Se2), respectively. See Supplementary Table 2 for numerical data and the text for details.
The exchange-correlation and Coulomb energy components in kcal.mol−1 between selected atoms, Y, (in parentheses) and all other atoms in the molecule (T).
| Molecules | VXC(Y,T) | ICIXC | VC(Y,T) | ICIC | Molecules | VXC(Y,T) | ICIXC | VC(Y,T) | ICIC |
|---|---|---|---|---|---|---|---|---|---|
| (Li) LiBH3− | −35.3 | 0.589 | −41.5 | −1.014 | (K) | −56.3 | 0.243 | −81.5 | 0.201 |
| (Na) NaBH3− | −38.3 | 0.488 | −9.2 | −2.098 | (Be) | −118.5 | 0.215 | −374.5 | 0.349 |
| (K) KBH3− | −31.8 | 0.431 | −5.2 | −2.654 | (Mg) | −39.8 | 0.178 | −15.8 | 0.070 |
| (Mg) MgBH3 | −69.3 | 0.485 | −40.7 | −3.290 | (Ca) | −120.5 | 0.380 | −143.5 | 0.475 |
| (Ca) CaBH3 | −57.8 | 0.424 | −67.2 | −2.436 | (Sr) | −122.1 | 0.435 | −134.9 | 0.551 |
| (Li) LiAlH3− | −56.6 | 0.850 | −57.4 | −0.411 | (Li) LiC(Ph)3 | −27.2 | 0.393 | −142.9 | 0.347 |
| (Na) NaAlH3− | −49.2 | 0.795 | −2.8 | −1.250 | (Na) NaC(Ph)3 | −29.4 | 0.299 | −117.4 | 0.247 |
| (K) KAlH3− | −32.2 | 0.748 | 0.1 | −9.000 | (K) KC(Ph)3 | −41.1 | 0.263 | −98.5 | 0.230 |
| (Mg) MgAlH3 | −39.7 | 0.451 | 0.7 | 59.857 | (Mg) MgC(Ph)3+ | −86.4 | 0.652 | −98.2 | 1.231 |
| (Ca) CaAlH3 | −44.4 | 0.561 | −10.4 | −7.712 | (Ca) CaC(Ph)3+ | −108.0 | 0.276 | −208.3 | 0.314 |
| (Ca) | −83.6 | 0.135 | −147.3 | −1.626 | (Sr) SrC(Ph)3+ | −110.1 | 0.298 | −190.0 | 0.339 |
| (Li) LiCF3 | −23.4 | 0.910 | −142.8 | −0.657 | (Cl) BCl3 | −138.2 | 0.647 | −236.8 | 1.676 |
| (Na) NaCF3 | −31.2 | 0.891 | −104.5 | −0.945 | (Cl) BeCl2 | −52.6 | 0.786 | −251.7 | 1.412 |
| (Be) BeCF3+ | −71.7 | 0.859 | −296.3 | −0.533 | (F) BeF2 | −53.2 | 0.842 | −287.0 | 1.391 |
| (Mg) MgCF3+ | −76.3 | 0.824 | −134.3 | −1.690 | (F) BF3 | −112.1 | 0.565 | −376.7 | 1.693 |
| (Li) | −27.9 | 0.022 | −145.2 | −1.537 | (H) C2H2 | −185.5 | 0.970 | 32.8 | 0.882 |
| (Na) | −31.2 | 0.029 | −122.6 | −1.540 | (H) C2H4 | −189.5 | 0.949 | 26.9 | 0.888 |
| (K) | −35.7 | 0.025 | −111.3 | −1.509 | (H) C2H6 | −189.8 | 0.933 | 23.4 | 0.889 |
| (Mg) | −59.9 | 0.038 | −299.5 | −1.346 | (F) CF4 | −187.4 | 0.649 | −287.0 | 1.863 |
| (Ca) | −75.6 | 0.028 | −233.0 | −1.507 | (Cl) CaCl2 | −47.8 | 0.988 | −145.9 | 1.359 |
| (Sr) | −72.6 | 0.025 | −227.5 | −1.487 | (F) CaF2 | −54.5 | 0.990 | −180.5 | 1.343 |
| (Mg) MgC(CN)3+a | −61.1 | 0.054 | −300.5 | −0.223 | (H) H2O | −124.9 | 0.995 | −126.7 | 1.706 |
| (Ca) CaC(CN)3+a | −80.4 | 0.090 | −198.6 | −0.209 | (H) H2Se | −158.6 | 0.964 | 27.2 | 0.833 |
| (Sr) SrC(CN)3+a | −77.6 | 0.093 | −188.7 | −0.197 | (H) H2S | −183.8 | 0.975 | 2.5 | 0.556 |
| (Li) LiCH3 | −26.8 | 0.940 | −165.5 | 0.857 | (H) H2O2 | −121.1 | 0.983 | −126.6 | 1.059 |
| (Na) NaCH3 | −43.3 | 0.926 | −99.3 | 0.869 | (H) H2S2 | −182.8 | 0.970 | 6.5 | 1.064 |
| (K) KCH3 | −38.1 | 0.927 | −96.7 | 0.805 | (H) H2Se2 | −163.8 | 0.983 | −15.4 | 0.984 |
| (Be) BeCH3+ | −72.9 | 0.940 | −384.7 | 1.240 | (K) K2O | −49.9 | 0.989 | −148.1 | 1.387 |
| (Mg) MgCH3+ | −84.6 | 0.933 | −147.7 | 1.331 | (Li) Li2O | −36.8 | 0.995 | −205.4 | 0.379 |
| (Ca) CaCH3+ | −76.6 | 0.928 | −189.5 | 1.062 | (Cl) MgCl2 | −43.7 | 0.953 | −185.0 | 1.378 |
| (Sr) SrCH3+ | −77.7 | 0.925 | −177.9 | 1.031 | (F) MgF2 | −43.0 | 0.979 | −228.0 | 1.360 |
| (Li) LiC(CH3)3 | −27.4 | 0.906 | −153.5 | 0.820 | (Na) Na2O | −42.6 | 0.988 | −158.7 | 0.368 |
| (Na) NaC(CH3)3 | −44.6 | 0.870 | −86.0 | 0.765 | (H) NH2NH2 | −170.4 | 0.970 | −10.1 | 4.864 |
| (K) KC(CH3)3 | −37.0 | 0.870 | −89.6 | 0.656 | (H) NH3 | −169.4 | 0.983 | −14.8 | 5.524 |
| (Mg) MgC(CH3)3+ | −87.2 | 0.827 | −84.8 | 1.535 | (H‒B) NH3BH3 | −136.9 | 0.651 | −198.4 | 1.859 |
| (Ca) CaC(CH3)3+ | −82.6 | 0.865 | −170.3 | 0.901 | (H‒N) NH3BH3 | −160.1 | 0.978 | −12.7 | 9.041 |
| (Li) | −48.9 | 0.288 | −124.0 | 0.219 | (H) NH4+ | −140.3 | 0.987 | 32.8 | −4.539 |
| (Na) | −47.7 | 0.195 | −87.9 | 0.109 | (H) PH3 | −158.5 | 0.826 | −200.1 | 1.552 |
The bond collectivity indices for the exchange-correlation and Coulombic energy components are also listed.
aM has multiple bond paths connecting that with several atoms.
Fig. 3The hierarchy of chemical bonds.
The nature of the 1,2 and 1,n interatomic interactions.