| Literature DB >> 35326752 |
Miguel Galarde-López1, Maria Elena Velazquez-Meza1, Miriam Bobadilla-Del-Valle2, Berta Alicia Carrillo-Quiroz1, Patricia Cornejo-Juárez3, Alfredo Ponce-de-León2, Alejandro Sassoé-González4, Celia Mercedes Alpuche-Aranda1.
Abstract
The objective of this study was to investigate the presence and persistence of carbapenemase-producing Klebsiella spp. isolated from wastewater and treated wastewater from two tertiary hospitals in Mexico. We conducted a descriptive cross-sectional study in two hospital wastewater treatment plants, which were sampled in February 2020. We obtained 30 Klebsiella spp. isolates. Bacterial identification was carried out by the Matrix-Assisted Laser Desorption/Ionization-Time of Flight mass spectrometry (MALDI-TOF MS®) and antimicrobial susceptibility profiles were performed using the VITEK2® automated system. The presence of carbapenem resistance genes (CRGs) in Klebsiella spp. isolates was confirmed by PCR. Molecular typing was determined by pulsed-field gel electrophoresis (PFGE). High rates of Klebsiella spp. resistance to cephalosporins and carbapenems (80%) were observed in isolates from treated wastewater from both hospitals. The molecular screening by PCR showed the presence of blaKPC and blaOXA-48-like genes. The PFGE pattern separated the Klebsiella isolates into 19 patterns (A-R) with three subtypes (C1, D1, and I1). Microbiological surveillance and identification of resistance genes of clinically important pathogens in hospital wastewater can be a general screening method for early determination of under-detected antimicrobial resistance profiles in hospitals and early warning of outbreaks and difficult-to-treat infections.Entities:
Keywords: Klebsiella pneumoniae; carbapenem resistance; public health; waste and treated water
Year: 2022 PMID: 35326752 PMCID: PMC8944648 DOI: 10.3390/antibiotics11030288
Source DB: PubMed Journal: Antibiotics (Basel) ISSN: 2079-6382
Phenotyping properties of carbapenemase-producing Klebsiella spp. present in wastewater treatment plant (WWTP) of Hospital Regional de Alta Especialidad de Ixtapaluca (HRAEI) and Instituto Nacional de Cancerología (INCAN).
| Hospital | Sample Site | Code | Isolated | Genes | AMP | TZP | FOX | CAZ | CTX | CEF | DOR | ERT | IPM | MEM | AMK | GEN | CIP | TIG |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HRAEI | Raw Wastewater | 1A-1 |
| 16 | <4 | <4 | 4 | 16 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | 1 | <0.025 | <0.5 | |
| 1A-2 |
| 4 | <4 | <4 | <1 | <1 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | 1 | <0.025 | <0.5 | |||
| IXT02B |
|
| >32 | >128 | 16 | >64 | 16 | 2 | >8 | >8 | 8 | >16 | 2 | 1 | 1 | <0.5 | ||
| IXT05B |
| 4 | <4 | <4 | <1 | <1 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | 1 | <0.025 | <0.5 | |||
| Treated Wastewater | 5A-1 |
|
| >32 | >128 | 16 | >64 | >64 | >64 | >8 | >8 | >16 | >16 | <2 | >16 | 2 | 2 | |
| 5A-2 |
| >32 | 8 | <4 | 4 | >64 | 2 | <0.12 | <0.5 | <0.25 | <0.25 | 4 | <1 | 2 | 2 | |||
| 5C-2 |
|
| >32 | >128 | 16 | 64 | 16 | 2 | >8 | >8 | 8 | >16 | 2 | 1 | 2 | <0.5 | ||
| 5D-3 |
| >32 | >128 | >64 | >64 | >64 | >64 | >8 | >8 | >16 | >16 | >64 | 16 | >4 | <0.5 | |||
| IXT09C |
| >32 | >128 | >64 | >64 | >64 | >64 | >8 | >8 | >16 | >16 | 16 | 1 | 1 | <0.5 | |||
| INCAN | Raw Wastewater | 9A-1 |
| 4 | <4 | <4 | <1 | <1 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | 1 | <0.025 | 1 | |
| 9A-2 |
|
| >32 | >128 | 16 | 64 | 16 | 2 | >8 | >8 | 8 | >16 | >64 | 8 | 1 | 1 | ||
| 9D-3 |
| 4 | <4 | <4 | <1 | <1 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | 1 | <0.025 | 1 | |||
| 10B-2 |
| 2 | <4 | <4 | <1 | <1 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | 1 | <0.025 | 1 | |||
| 10B-3 |
| 4 | <4 | <4 | <1 | <1 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | <1 | <0.025 | 1 | |||
| 17A-1 |
| 4 | <4 | <4 | <1 | <1 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | 1 | <0.025 | <0.5 | |||
| 17A-2 |
|
| >32 | >128 | 8 | >64 | 16 | 2 | >8 | >8 | >16 | >16 | 2 | 1 | 1 | <0.5 | ||
| 17C-1 |
|
| >32 | >128 | 4 | >64 | 8 | 2 | >8 | >8 | >16 | >16 | 2 | 1 | 1 | <0.5 | ||
| 17D-3 |
| 4 | <4 | <4 | <1 | <1 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | 1 | <0.025 | <0.5 | |||
| 20-Mar |
| 4 | <4 | <4 | <1 | <1 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | 1 | <0.025 | <0.5 | |||
| CAN14E |
| 4 | <4 | <4 | <1 | <1 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | 1 | <0.025 | <0.5 | |||
| Treated Wastewater | 13A-1 |
| 4 | <4 | <4 | <1 | <1 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | <1 | <0.025 | 1 | ||
| 13A-2 |
|
| >32 | >128 | 16 | >64 | 16 | 2 | >8 | >8 | >16 | >16 | >64 | 8 | 0.5 | 1 | ||
| 13C-1 |
|
| >32 | >128 | 4 | >64 | 16 | 2 | >8 | >8 | >16 | >16 | 2 | 1 | >4 | <0.5 | ||
| 13C-2 |
|
| >32 | >128 | >64 | >64 | 32 | 8 | >8 | >8 | 8 | >16 | <2 | 8 | 1 | 1 | ||
| 16-ene |
|
| >32 | >128 | 8 | >64 | >64 | 2 | >8 | >8 | 8 | >16 | 2 | 1 | 1 | <0.5 | ||
| 16-Mar |
|
| >32 | >128 | >64 | >64 | >64 | 32 | >8 | >8 | >16 | >16 | 8 | 1 | 2 | 2 | ||
| 21A-1 |
|
| >32 | >128 | 8 | >64 | 8 | 2 | >8 | 4 | 8 | >16 | 2 | 8 | 2 | 1 | ||
| 21D-1 |
|
| >32 | >128 | 8 | >64 | 16 | 2 | >8 | >8 | >16 | >16 | 2 | >16 | >4 | 1 | ||
| CAN15F |
|
| >32 | >128 | 8 | 64 | 8 | 2 | >8 | 4 | 8 | >16 | <2 | >16 | >4 | 1 | ||
| 13D-3-k |
| 4 | <4 | <4 | <1 | <1 | <1 | <0.12 | <0.5 | <0.25 | <0.25 | <2 | 1 | <0.025 | 1 |
Ampicillin-sulbactam (AMP), piperacillin-tazobactam (TZP), cefoxitin (FOX), ceftazidime (CAZ), ceftriaxone (CTX), cefepime (CEF), doripenem (DOR), ertapenem (ERT), imipenem (IPM), meropenem (MEM), amikacin (AMK), gentamicin (GEN), ciprofloxacin (CIP) and tigecycline (TIG).
Figure 1Dendrogram based on pulsed-field gel electrophoresis (PFGE) patterns after digestion with enzyme Xba I of Klebsiella spp. isolates isolated from hospital wastewater.
Primer sequences of target carbapenems genes and their respective amplicon sizes and PCR cycling conditions.
| Target Gene | Primer Sequence (5’-3’) | Amplicon Size (bp) | PCR Cycling Condition | References |
|---|---|---|---|---|
|
| F: GGTTTGGCGATCTGGTTTTC | 621 | Initial denaturation 10 min at 94 °C. Denaturation at 94 °C for 30 s, annealing at 52 °C for 40 s, extension at 72 °C for 50 s, by 36 cycles, and final extension at 72 °C for 10 min. | Dogonchi AA, et al. [ |
|
| F: ATAGCCATCCTTGTTTAGCTC | 818 | Initial denaturation 10 min at 94 °C. Denaturation at 94 °C for 30 s, annealing at 58 °C for 30 s, extension at 72 °C for 1 min by 30 cycles, and final extension at 72 °C for 10 min. | Aubron, |
|
| F: ATGTCACTGTATCGCCGTCT | 893 | Initial denaturation 15 min at 95 °C. Denaturation at 94 °C for 1 min, annealing at 62 °C for 1 min, extension at 72 °C for 1 min by 38 cycles, and final extension at 72 °C for 10 min. | Bradford, PA, et al. [ |
|
| F: TTGGTGGCATCGATTATCGG | 744 | Initial denaturation 5 min at 94 °C. Denaturation at 94 °C for 1 min, annealing at 60 °C for 1 min, extension at 72 °C for 1 min by 30 cycles, and final extension at 72 °C for 10 min. | Poirel, LC, |