Literature DB >> 3528756

The nucleotide sequence of an Escherichia coli chromosomal region containing the genes for ribosomal proteins S6, S18, L9 and an open reading frame.

J Schnier, M Kitakawa, K Isono.   

Abstract

The DNA sequence of a cluster of genes for ribosomal proteins S6 (rpsF), S18 (rpsR) and L9 (rplI), and of their surrounding regions was determined. The order of the genes was established as promoter-rpsF-rpsR-rplI. There is a 315 bp open reading frame that begins seven nucleotides after the end of rpsF and ends immediately before rpsR. Based on the data of insertional mutagenesis experiments with transposon gamma delta, we concluded that these genes probably form an operon. The amino acid sequence deduced from the nucleotide sequence of the genes agrees completely with the published amino acid sequence data for protein S6, but there are discrepancies in the case of proteins S18 and L9. The C-terminus of protein S6 was deduced to end with two Glu residues, suggesting that the other Glu residues previously found in this protein are added post-translationally as has been predicted (Reeh and Pedersen 1979). A possible secondary structure in the leader sequence as well as a possible transcriptional terminator after rplI were noticed in the sequence.

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Year:  1986        PMID: 3528756     DOI: 10.1007/bf00330199

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  21 in total

1.  Primary structure of protein S18 from the small Escherichia coli ribosomal subunit.

Authors:  M Yaguchi
Journal:  FEBS Lett       Date:  1975-11-15       Impact factor: 4.124

2.  Mutations affecting the structural genes and the genes coding for modifying enzymes for ribosomal proteins in Escherichia coli.

Authors:  S Isono; K Isono
Journal:  Mol Gen Genet       Date:  1978-09-20

3.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

4.  Isolation and characterization of temperature-sensitive mutants of Escherichia coli with altered ribosomal proteins.

Authors:  K Isono; J Krauss; Y Hirota
Journal:  Mol Gen Genet       Date:  1976-12-22

5.  A computer program package for storing and retrieving DNA/RNA and protein sequence data.

Authors:  K Isono
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

6.  Isolation and characterization of specialized transducing lambda phages carrying ribosomal protein genes of Escherichia coli.

Authors:  M Kitakawa; L Blumenthal; K Isono
Journal:  Mol Gen Genet       Date:  1980

7.  The gamma delta sequence of F is an insertion sequence.

Authors:  M S Guyer
Journal:  J Mol Biol       Date:  1978-12-15       Impact factor: 5.469

8.  A system for shotgun DNA sequencing.

Authors:  J Messing; R Crea; P H Seeburg
Journal:  Nucleic Acids Res       Date:  1981-01-24       Impact factor: 16.971

9.  Cluster of ribosomal protein genes in Escherichia coli containing genes for proteins S6, S18, and L9.

Authors:  K Isono; M Kitakawa
Journal:  Proc Natl Acad Sci U S A       Date:  1978-12       Impact factor: 11.205

10.  Cloning and nucleotide sequencing of the genes for ribosomal proteins S9 (rpsI) and L13 (rplM) of Escherichia coli.

Authors:  S Isono; S Thamm; M Kitakawa; K Isono
Journal:  Mol Gen Genet       Date:  1985
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  16 in total

1.  Two new Sinorhizobium meliloti LysR-type transcriptional regulators required for nodulation.

Authors:  Li Luo; Shi-Yi Yao; Anke Becker; Silvia Rüberg; Guan-Qiao Yu; Jia-Bi Zhu; Hai-Ping Cheng
Journal:  J Bacteriol       Date:  2005-07       Impact factor: 3.490

2.  Transcription of ten ribosomal protein genes from tobacco chloroplasts: a compilation of ribosomal protein genes found in the tobacco chloroplast genome.

Authors:  C Ohto; K Torazawa; M Tanaka; K Shinozaki; M Sugiura
Journal:  Plant Mol Biol       Date:  1988-09       Impact factor: 4.076

Review 3.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

Review 4.  Linkage map of Escherichia coli K-12, edition 8.

Authors:  B J Bachmann
Journal:  Microbiol Rev       Date:  1990-06

Review 5.  Regulation of chromosomally mediated multiple antibiotic resistance: the mar regulon.

Authors:  M N Alekshun; S B Levy
Journal:  Antimicrob Agents Chemother       Date:  1997-10       Impact factor: 5.191

6.  Nucleotide sequences of cDNAs encoding four complete nuclear-encoded plastid ribosomal proteins.

Authors:  J S Gantt
Journal:  Curr Genet       Date:  1988-11       Impact factor: 3.886

7.  Directional mutation pressure and transfer RNA in choice of the third nucleotide of synonymous two-codon sets.

Authors:  S Osawa; T Ohama; F Yamao; A Muto; T H Jukes; H Ozeki; K Umesono
Journal:  Proc Natl Acad Sci U S A       Date:  1988-02       Impact factor: 11.205

8.  Characterization of the gene rimK responsible for the addition of glutamic acid residues to the C-terminus of ribosomal protein S6 in Escherichia coli K12.

Authors:  W K Kang; T Icho; S Isono; M Kitakawa; K Isono
Journal:  Mol Gen Genet       Date:  1989-06

9.  Characterization of rps17, rp19 and rpl15: three nucleus-encoded plastid ribosomal protein genes.

Authors:  M D Thompson; C M Jacks; T R Lenvik; J S Gantt
Journal:  Plant Mol Biol       Date:  1992-03       Impact factor: 4.076

10.  A mutation in ribosomal protein L9 affects ribosomal hopping during translation of gene 60 from bacteriophage T4.

Authors:  K L Herbst; L M Nichols; R F Gesteland; R B Weiss
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-20       Impact factor: 11.205

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