| Literature DB >> 35260691 |
Vera Holzmayer1, Russell Taylor2, Mary C Kuhns2, Susan H Gawel2, Nicaise Ndembi3, Dora Mbanya4, Lazare Kaptue5, Mary A Rodgers2, Gavin Cloherty2.
Abstract
Early diagnosis of hepatitis C virus (HCV) infection is essential for prompt initiation of treatment and prevention of transmission, yet several logistical barriers continue to limit access to HCV testing. Dried blood spot (DBS) technology involves a simple fingerstick that eliminates the need for trained personnel, and DBS can be stored and transported at room temperature. We evaluated the use of DBS whole blood samples in the modified Abbott ARCHITECT anti-HCV assay, comparing assay performance against the standard assay run using DBS and venous plasma samples. 144 HCV positive and 104 HCV negative matched venous plasma and whole blood specimens were selected from a retrospective study with convenience sampling in Cameroon. Results obtained using a modified volume DBS assay were highly correlated to the results of the standard assay run with plasma on clinical samples and dilution series (R2 = 0.71 and 0.99 respectively). The ARCHITECT Anti-HCV assay with input volume modification more accurately detects HCV antibodies in DBS whole blood samples with 100% sensitivity and specificity, while the standard assay had 90.97% sensitivity. The use of DBS has the potential to expand access to HCV testing to underserved or marginalized populations with limited access to direct HCV care.Entities:
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Year: 2022 PMID: 35260691 PMCID: PMC8904514 DOI: 10.1038/s41598-022-07821-0
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Dilution sensitivity for 6-mm and 12-mm DBS eluted in EB and AD, tested with the standard and modified sample volume ARCHITECT anti-HCV assay.
| Plasma | 12-mm DBS, STD assay, EB | 12-mm DBS, STD assay, AD | 12-mm DBS, MSV assay, EB | 12-mm DBS, MSV assay, AD | 6-mm DBS, MSV assay, EB | 6-mm DBS, MSV assay, AD | |
|---|---|---|---|---|---|---|---|
| DF | S/CO | S/CO | S/CO | S/CO | S/CO | S/CO | S/CO |
| Neat | 16 | ||||||
| 10 | |||||||
| 20 | |||||||
| 40 | |||||||
| 60 | |||||||
| 100 | 0.69 | 0.68 | |||||
| 200 | 0.36 | 0.33 | 0.94 | ||||
| 500 | 0.15 | 0.14 | 0.98 | 0.41 | 0.39 | ||
| 1000 | 0.91 | 0.09 | 0.08 | 0.78 | 0.53 | 0.31 | 0.21 |
| Neat | 16.26 | ||||||
| 10 | |||||||
| 20 | |||||||
| 40 | |||||||
| 60 | 0.90 | 0.72 | |||||
| 100 | 0.55 | 0.45 | |||||
| 200 | 0.27 | 0.24 | 3.14 | 0.64 | |||
| 500 | 0.13 | 0.11 | 1.39 | 0.76 | 0.48 | 0.34 | |
| 1000 | 0.42 | 0.08 | 0.08 | 0.73 | 0.49 | 0.24 | 0.18 |
Each sample dilution was tested one time as 12 mm and 6 mm DBS eluted in elution buffer (EB) and assay diluent (AD) using anti-HCV standard and modified assay files. STD standard assay, MSV modified sample volume, EB elution buffer, AD assay diluent, S/CO signal to cutoff ratio. Italic values indicates reactive samples with S/CO ≥ 1.00.
Figure 1Comparison of DBS and plasma results. (a,b) anti-HCV S/CO values for DBS from dilution series are plotted against S/COs for matched plasma dilutions (R2 = 0.98, 0.99). Two highly reactive plasma samples A (genotype 1b) and B (genotype 1a) were serially diluted in plasma and whole blood at 8 dilution levels: 1:10, 1:20, 1:40, 1:60, 1:100, 1:200, 1:500 and 1:1000. 12-mm DBS eluted in EB were tested using the modified sample volume assay and plasma was tested using the standard anti-HCV assay. Blue dotted line shows linear regression; orange dotted line represents an equivalency line. (c) anti-HCV results obtained from matched DBS and plasma clinical samples (N = 144) tested with the modified and the standard assays, respectively (R2 = 0.71). (d) DBS anti-HCV S/COs plotted against plasma S/COs by genotypes. Series on the plot represent genotypes: 1 (n = 18), 2 (n = 6), 4 (n = 36); R2 = 0.73, 0.11, 0.85, respectively. Difference in DBS S/CO values between genotype groups is not significant (p > 0.05): genotype 1 vs 2, p = 0.055; 1 vs 4, p = 0.589; 2 vs 4, p = 0.08.
Precision of the modified sample volume ARCHITECT anti-HCV assay using whole blood DBS samples.
| Instrument | Run | DBS Rep | Neg whole blood | Sample A dilutions | |||
|---|---|---|---|---|---|---|---|
| D 1:500 | D 1:200 | D 1:100 | D 1:20 | ||||
| Low Pos -1 | Low Pos-2 | Mid Pos | High Pos | ||||
| 1 | 1 | 1 | 0.09 | 2.11 | 4.15 | 6.69 | 12.10 |
| 1 | 1 | 2 | 0.09 | 2.23 | 4.16 | 6.56 | 11.60 |
| 1 | 1 | 3 | 0.04 | 1.63 | 4.17 | 6.57 | 12.28 |
| 1 | 2 | 1 | 0.10 | 2.03 | 4.28 | 6.61 | 11.50 |
| 1 | 2 | 2 | 0.09 | 1.79 | 3.33 | 5.42 | 11.23 |
| 1 | 2 | 3 | 0.09 | 1.84 | 4.31 | 6.32 | 11.27 |
| 1 | 3 | 1 | 0.08 | 1.39 | 4.07 | 6.58 | 11.98 |
| 1 | 3 | 2 | 0.09 | 1.95 | 3.99 | 6.59 | 8.44 |
| 1 | 3 | 3 | 0.10 | 2.03 | 4.33 | 4.84 | 11.15 |
| Mean | 0.09 | 1.89 | 4.09 | 6.24 | 11.28 | ||
| SD | 0.02 | 0.26 | 0.31 | 0.65 | 1.14 | ||
| %CV | 21.16 | 13.71 | 7.47 | 10.49 | 10.10 | ||
| 2 | 1 | 1 | 0.10 | 2.38 | 4.45 | 7.00 | 13.07 |
| 2 | 1 | 2 | 0.10 | 2.26 | 4.29 | 7.13 | 13.22 |
| 2 | 1 | 3 | 0.09 | 2.18 | 4.48 | 6.72 | 13.40 |
| 2 | 2 | 1 | 0.10 | 2.23 | 4.89 | 7.38 | 13.01 |
| 2 | 2 | 2 | 0.11 | 2.34 | 4.41 | 6.94 | 12.75 |
| 2 | 2 | 3 | 0.11 | 2.21 | 4.50 | 6.79 | 12.54 |
| 2 | 3 | 1 | 0.11 | 2.12 | 4.79 | 7.43 | 12.63 |
| 2 | 3 | 2 | 0.11 | 2.02 | 4.79 | 6.62 | 13.01 |
| 2 | 3 | 3 | 0.10 | 1.98 | 4.62 | 7.21 | 13.15 |
| Mean | 0.10 | 2.19 | 4.58 | 7.02 | 12.98 | ||
| SD | 0.01 | 0.13 | 0.20 | 0.29 | 0.28 | ||
| CV% | 6.84 | 6.11 | 4.45 | 4.07 | 2.18 | ||
| Total | N = 18 | ||||||
| Mean | 0.09 | 2.04 | 4.33 | 6.63 | 12.13 | ||
| SD | 0.02 | 0.25 | 0.36 | 0.63 | 1.19 | ||
| %CV | 17.12 | 12.42 | 8.24 | 9.56 | 9.78 | ||
SD standard deviation.
Figure 2Flow chart for testing DBS samples to evaluate clinical sensitivity and specificity of the anti-HCV assays.
Summary of DBS anti-HCV results for matched clinical samples (N = 144).
| Plasma viral load, log IU/ml | Plasma anti-HCV, S/CO | DBS anti-HCV STD assay, S/CO | DBS anti-HCV MSV assay, S/CO | |
|---|---|---|---|---|
| Range | < 1.48–6.42 | 1.28–15.55 | 0.2–16.38 | 1.67–16.21 |
| Median | 4.74 | 12.16 | 8.27 | 13.81 |
| SD | 0.97 | 2.70 | 4.82 | 3.36 |
| Positive, N (%) | 144 | 144 | 131 (90.97%) | 144 (100%) |
Viral load results detected < 1.48 log IU/ml for three samples were assigned value of 1.40 log IU/ml for calculation of median and standard deviation values. DBS were tested using standard (STD) and modified sample volume (MSV) assays. SD standard deviation.
Diagnostic testing accuracy characteristics.
| Disease present | Disease not present | Total | |
|---|---|---|---|
| Plasma anti-HCV+ | Plasma anti-HCV− | ||
| Positive | 144 (TP) | 0 (FP) | 144 (TP + FP) |
| Negative | 0 (FN) | 104 (TN) | 104 (TN + FN) |
| Total | 144 (TP + FN) | 104 (TN + FP) | 248 |
| Sensitivity = TP/(TP + FN) = 144/144 × 100% = 100% (95% CI 97.47–100.00) | |||
| Specificity = TN/(TN + FP) = 104/104 × 100% = 100% (95% CI 96.52–100.00) | |||
| Positive predictive value (PPV) = TP/(TP + FP) = 144/144 × 100% = 100% (95% CI 97.40–100.00), calculated at 58.06% prevalence (144 positive/248 total) | |||
| Negative predictive value (NPV) = TN/(TN + FN) = 104/104 × 100% = 100% (95% CI 96.44–100), calculated at 58.06% prevalence | |||
| Positive likelihood ratio (LR+) = sensitivity/(1-specificity) = NA | |||
Negative likelihood ratio (LR−) = (1-sensitivity)/specificity = 0 Area under the ROC curve (AUC) = 1.00 | |||
| Positive | 131 (TP) | 0 (FP) | 131 (TP + FP) |
| Negative | 13 (FN) | 104 (TN) | 117 (TN + FN) |
| Total | 144 (TP + FN) | 104 (TN + FP) | 248 |
| Sensitivity = TP/(TP + FN) = 131/(131 + 13) × 100% = 90.97% (95% CI 85.06–95.11) | |||
| Specificity = TN/(TN + FP) = 104/104 × 100% = 100% (95% CI 96.52–100.00) | |||
| Positive predictive value (PPV) = TP/(TP + FP) = 131/131 × 100% = 100% (95% CI 97.22–100.00), calculated at 58.06% prevalence | |||
| Negative predictive value (NPV) = TN/(TN + FN) = 104/(104 + 13) = 88.89% (95% CI 81.75–93.95), calculated at 58.06% prevalence | |||
| Positive likelihood ratio (LR+) = sensitivity/(1-specificity) = NA | |||
Negative likelihood ratio (LR−) = (1-sensitivity)/specificity = (1–0.9097)/1 = 0.09 (95% CI 0.05–0.15) Area under the ROC curve (AUC) = 1.00 | |||
TP true positive, FN false negative, FP false positive, TN true negative, NA not applicable.