Literature DB >> 35238091

Foldable Detergents for Membrane Protein Study: Importance of Detergent Core Flexibility in Protein Stabilization.

Lubna Ghani1, Seonghoon Kim2, Haoqing Wang3, Hyun Sung Lee1, Jonas S Mortensen4, Satoshi Katsube5, Yang Du3,6, Aiman Sadaf1, Waqar Ahmed1, Bernadette Byrne7, Lan Guan5, Claus J Loland4, Brian K Kobilka3, Wonpil Im8, Pil Seok Chae1.   

Abstract

Membrane proteins are of biological and pharmaceutical significance. However, their structural study is extremely challenging mainly due to the fact that only a small number of chemical tools are suitable for stabilizing membrane proteins in solution. Detergents are widely used in membrane protein study, but conventional detergents are generally poor at stabilizing challenging membrane proteins such as G protein-coupled receptors and protein complexes. In the current study, we prepared tandem triazine-based maltosides (TZMs) with two amphiphilic triazine units connected by different diamine linkers, hydrazine (TZM-Hs) and 1,2-ethylenediamine (TZM-Es). These TZMs were consistently superior to a gold standard detergent (DDM) in terms of stabilizing a few membrane proteins. In addition, the TZM-Es containing a long linker showed more general protein stabilization efficacy with multiple membrane proteins than the TZM-Hs containing a short linker. This result indicates that introduction of the flexible1,2-ethylenediamine linker between two rigid triazine rings enables the TZM-Es to fold into favourable conformations in order to promote membrane protein stability. The novel concept of detergent foldability introduced in the current study has potential in rational detergent design and membrane protein applications.
© 2022 Wiley-VCH GmbH.

Entities:  

Keywords:  amphiphiles; detergent folding; membrane proteins; protein stabilization; self-assembly

Mesh:

Substances:

Year:  2022        PMID: 35238091      PMCID: PMC9007890          DOI: 10.1002/chem.202200116

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  47 in total

1.  Lipopeptide detergents designed for the structural study of membrane proteins.

Authors:  Clare-Louise McGregor; Lu Chen; Neil C Pomroy; Peter Hwang; Sandy Go; Avijit Chakrabartty; Gilbert G Privé
Journal:  Nat Biotechnol       Date:  2003-01-13       Impact factor: 54.908

2.  Coupling ligand structure to specific conformational switches in the beta2-adrenoceptor.

Authors:  Xiaojie Yao; Charles Parnot; Xavier Deupi; Venkata R P Ratnala; Gayathri Swaminath; David Farrens; Brian Kobilka
Journal:  Nat Chem Biol       Date:  2006-06-25       Impact factor: 15.040

3.  Probing dynamics at interfaces: resonance enhanced dynamic light scattering.

Authors:  Markus A Plum; Werner Steffen; George Fytas; Wolfgang Knoll; Bernhard Menges
Journal:  Opt Express       Date:  2009-06-08       Impact factor: 3.894

4.  Conformationally Preorganized Diastereomeric Norbornane-Based Maltosides for Membrane Protein Study: Implications of Detergent Kink for Micellar Properties.

Authors:  Manabendra Das; Yang Du; Orquidea Ribeiro; Parameswaran Hariharan; Jonas S Mortensen; Dhabaleswar Patra; Georgios Skiniotis; Claus J Loland; Lan Guan; Brian K Kobilka; Bernadette Byrne; Pil Seok Chae
Journal:  J Am Chem Soc       Date:  2017-02-20       Impact factor: 15.419

5.  Isomeric Detergent Comparison for Membrane Protein Stability: Importance of Inter-Alkyl-Chain Distance and Alkyl Chain Length.

Authors:  Kyung Ho Cho; Parameswaran Hariharan; Jonas S Mortensen; Yang Du; Anne K Nielsen; Bernadette Byrne; Brian K Kobilka; Claus J Loland; Lan Guan; Pil Seok Chae
Journal:  Chembiochem       Date:  2016-11-07       Impact factor: 3.164

6.  Diastereomeric Cyclopentane-Based Maltosides (CPMs) as Tools for Membrane Protein Study.

Authors:  Manabendra Das; Florian Mahler; Parameswaran Hariharan; Haoqing Wang; Yang Du; Jonas S Mortensen; Eugenio Pérez Patallo; Lubna Ghani; David Glück; Ho Jin Lee; Bernadette Byrne; Claus J Loland; Lan Guan; Brian K Kobilka; Sandro Keller; Pil Seok Chae
Journal:  J Am Chem Soc       Date:  2020-12-14       Impact factor: 15.419

7.  Novel Xylene-Linked Maltoside Amphiphiles (XMAs) for Membrane Protein Stabilisation.

Authors:  Kyung Ho Cho; Yang Du; Nicola J Scull; Parameswaran Hariharan; Kamil Gotfryd; Claus J Loland; Lan Guan; Bernadette Byrne; Brian K Kobilka; Pil Seok Chae
Journal:  Chemistry       Date:  2015-05-26       Impact factor: 5.236

8.  Detergent binding as a measure of hydrophobic surface area of integral membrane proteins.

Authors:  J V Møller; M le Maire
Journal:  J Biol Chem       Date:  1993-09-05       Impact factor: 5.157

9.  Conformational thermostabilization of the beta1-adrenergic receptor in a detergent-resistant form.

Authors:  Maria J Serrano-Vega; Francesca Magnani; Yoko Shibata; Christopher G Tate
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-11       Impact factor: 11.205

10.  Butane-1,2,3,4-tetraol-based amphiphilic stereoisomers for membrane protein study: importance of chirality in the linker region.

Authors:  Manabendra Das; Yang Du; Jonas S Mortensen; Orquidea Ribeiro; Parameswaran Hariharan; Lan Guan; Claus J Loland; Brian K Kobilka; Bernadette Byrne; Pil Seok Chae
Journal:  Chem Sci       Date:  2016-10-05       Impact factor: 9.825

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