| Literature DB >> 35209232 |
Kuakarun Krusong1, Abbas Ismail1, Karan Wangpaiboon1, Piamsook Pongsawasdi2.
Abstract
Amylomaltase is a well-known glucan transferase that can produce large ring cyclodextrins (LR-CDs) or so-called cycloamyloses via cyclization reaction. Amylomaltases have been found in several microorganisms and their optimum temperatures are generally around 60-70 °C for thermostable amylomaltases and 30-45 °C for the enzymes from mesophilic bacteria and plants. The optimum pHs for mesophilic amylomaltases are around pH 6.0-7.0, while the thermostable amylomaltases are generally active at more acidic conditions. Size of LR-CDs depends on the source of amylomaltases and the reaction conditions including pH, temperature, incubation time, and substrate. For example, in the case of amylomaltase from Corynebacterium glutamicum, LR-CD productions at alkaline pH or at a long incubation time favored products with a low degree of polymerization. In this review, we explore the synthesis of LR-CDs by amylomaltases, structural information of amylomaltases, as well as current applications of LR-CDs and amylomaltases.Entities:
Keywords: 4-α-glucanotransferases; amylomaltase; cyclization; large-ring cyclodextrin; starch
Mesh:
Substances:
Year: 2022 PMID: 35209232 PMCID: PMC8875642 DOI: 10.3390/molecules27041446
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Optimum conditions for characterized AMs.
| Enzyme Name | Source | Optimum Condition | References | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cyclization | Disproportionation | Hydrolysis | Coupling | |||||||||||
| T °C | pH | Specific Activity (U/mg) | T °C | pH | Specific Activity (U/mg) | T °C | pH | Specific Activity (U/mg) | T °C | pH | Specific Activity (U/mg) | |||
| Archaea | ||||||||||||||
| AM | N/A | N/A | N/A | 95 | 6.7 | 450 | N/A | N/A | N/A | N/A | N/A | N/A | [ | |
| AM | N/A | N/A | N/A | 80 | 6.9 | 690 | N/A | N/A | N/A | N/A | N/A | N/A | [ | |
| Bacteria | ||||||||||||||
| AM | N/A | N/A | N/A | 90 | 6.6 | 44.2 | N/A | N/A | N/A | N/A | N/A | N/A | [ | |
| AM | 30 | 6.0 | 0.50 | 30–45 | 6.0 | 21.8–44.3 | N/A | N/A | 0.02–8.05 | N/A | N/A | 0.03 | [ | |
| AM | 30 | 6.0 | 0.9 | 40 | 6.0 | 54 | N/A | N/A | 0.05 | N/A | N/A | 0.19 | [ | |
| AM | N/A | N/A | N/A | 75 | 5.5–6.0 | 2.9 | N/A | N/A | N/A | N/A | N/A | N/A | [ | |
| AM |
| 70 | 5.0 | 0.64 | 60 | 6.5 | 159 | N/A | N/A | 1.86 × 10−2 | N/A | N/A | 6.91 × 10−2 | [ |
| 4αGTase/AM (TBGT) |
| N/A | N/A | N/A | 70 | 6.0 | 70734 | N/A | N/A | N/A | N/A | N/A | N/A | [ |
| 4αGTase/AM |
| N/A | N/A | N/A | 72–75 | 5.5–6.3 | 400 | N/A | N/A | N/A | N/A | N/A | N/A | [ |
| 4αGTase | N/A | N/A | N/A | 75 | 7.5 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | [ | |
| 4αGTase |
| N/A | N/A | N/A | 37 | 5.5 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | [ |
| 4αGTase | N/A | N/A | N/A | 28 | 6.9 | 9400 | N/A | N/A | N/A | N/A | N/A | N/A | [ | |
| 4αGTase | N/A | N/A | N/A | 35 | 8.5 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | [ | |
| 4αGTase | N/A | N/A | N/A | 45 | 7.0 | 5.84 | N/A | N/A | N/A | N/A | N/A | N/A | [ | |
| 4αGTase |
| N/A | N/A | N/A | 75 | 7.5 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | [ |
| Plant | ||||||||||||||
| D-enzyme ( |
| N/A | N/A | N/A | 37 | 6.0–8.0 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | [ |
| D-enzyme ( |
| N/A | N/A | N/A | 42 | 7.0 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | [ |
| D-enzyme ( |
| N/A | N/A | N/A | 37 | 6.0–8.0 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | [ |
| D-enzyme ( |
| N/A | N/A | N/A | 45 | 6.7 | 47.5 | N/A | N/A | N/A | N/A | N/A | N/A | [ |
| D-enzyme ( | N/A | N/A | N/A | 30–39 | 6.0–7.0 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | [ | |
N/A: Not available.
Figure 1The overall structure of AM. Panel (A) presents the structure of TaAM (PDB: 1CWY). Panel (B) is the structure of CgAM (PDB: 5B68) superimposed with TaAM and shows N1 and N2 subdomains. Panel (C) is the dimeric AtDPE1 (PDB: 5CSU) superimposed with TaAM.
Figure 2Substrate binding tract of AM. Panel (A) is an asymmetric structure of TaAM co-crystallized with 34 mer cycloamylose (PDB: 5JIW). Panel (B) is a closed up active site of TaAM bound with the glucan. The bound ligand structure (PDB: 5JIW) is superimposed with apo-structure (PDB: 1CWY). Panel (C) shows active site of SaAM that presents acarbose-derived glycosyl-enzyme (blue) in the donor site and another ligand (yellow) in the acceptor site, while the D295, a nucleophile residue is in a light green color. SaAM is superimposed with apo-structure of TaAM (PDB: 1CWY).
Figure 3Schematic illustration showing the cycle of mechanism of AMs. (A) Apoenzyme. (B) Linear glucan is bound in the active site of AM. The bound glucan was cleaved between +1 and −1 subsite and then form glycosyl intermediate as shown in (C). (D) Non-reducing end of the bound glucan is folded back to the acceptor site. (E) Cyclic glucan is formed and then released before the AM reforms into its initial state. The schematic structure is illustrated based on TaAM (PDB: 1CWY). The important loops (250, 370 and 460 loops) are in green. The acid/base catalytic residue D293 and the recognition site around Y54 are shown in red and blue, respectively.
LR-CD production by AMs and D-enzymes
| Enzyme | Origin | Substrate | Degree of Polymerization | References |
|---|---|---|---|---|
| AM |
| Pea starch | DP22–DP50 | [ |
| AM |
| Synthetic amylose | DP22–DP > 60 | [ |
| AM |
| Pea starch | DP19–DP50 | [ |
| AM |
| Tapioca starch | DP22–DP54 | [ |
| AM |
| Pea starch | DP22–DP60 | [ |
| AM |
| Potato amylose | N/A | [ |
| 4αGTase | Sucrose | DP24–DP284 | [ | |
| 4αGTase | Corn starch | DP12–DP36 | [ | |
| 4αGTase |
| Amylose | DP5–DP37 | [ |
| 4αGTase |
| Amylose | DP16–DP50 | [ |
| D-enzyme | Potato amylose | DP16–DP > 60 | [ | |
| D-enzyme | Potato amylose | DP16–DP50 | [ | |
| D-enzyme | Potato tuber | Synthetic amylose | DP17–DP > 100 | [ |